Enterococcus faecalis DENG1: DENG_02405
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Entry
DENG_02405 CDS
T03043
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
efn
Enterococcus faecalis DENG1
Pathway
efn03030
DNA replication
efn03430
Mismatch repair
efn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DENG_02405 (holA)
03430 Mismatch repair
DENG_02405 (holA)
03440 Homologous recombination
DENG_02405 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efn03032
]
DENG_02405 (holA)
03400 DNA repair and recombination proteins [BR:
efn03400
]
DENG_02405 (holA)
Enzymes [BR:
efn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DENG_02405 (holA)
DNA replication proteins [BR:
efn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DENG_02405 (holA)
DNA repair and recombination proteins [BR:
efn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DENG_02405 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
nSTAND1
HTH_37
DUF1598
Motif
Other DBs
NCBI-ProteinID:
AHI41297
LinkDB
All DBs
Position
complement(2177094..2178122)
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AA seq
342 aa
AA seq
DB search
MELQKALKEVREQKIAPVYLLIGTELYLTELFKTTLMKELLTEEDDQFNFFSFDMEETPL
SAAIAEAETIPFFGDYRLVFVENPYFLTAERKTNGVEHDVNLLLNYLESPSPTTVLVFMA
SYEKLDERKKITKALKKNATVVDVNPMDEKAIRQYISQTIESEGYTIRSDAFDLLLQLTD
LNLSKIMGELQKLYLYALETKTITRGAVQELVPKSLEHNVFDLTNEVLSGNSEKAVQLYE
DLLLQGEETIKLNAILLNQIRLFLQTKILAKMGYQQANIADTLKVHPYRVKLALQQVRRF
ELSRLERLYDELVENDYRMKTGQMDKELLFQLFILKLTAQAK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagttacaaaaagctttgaaagaagtgcgagagcaaaaaatcgctccagtgtattta
ttaataggaacagaactttatttaactgaattatttaaaacaacattgatgaaagaattg
ttgacggaagaggatgatcaatttaactttttctcatttgatatggaggaaacaccttta
agtgcagcgattgctgaagcggaaacaattccgttttttggtgattatcgccttgtcttt
gtggaaaatccttactttttaactgccgaaagaaaaacaaacggtgtggaacatgatgtc
aatcttttattgaattatttggaaagtccatcaccaacaactgttcttgtttttatggcc
tcatatgaaaaattagatgaacgcaaaaaaattaccaaagcattgaaaaaaaatgccaca
gtggttgacgtcaatccaatggatgaaaaggctattcgtcagtacatttctcaaacgatt
gagagcgaagggtacactattcgctccgatgcttttgatttattacttcaattgacagac
ttgaacttatcaaaaattatgggagaattacagaagctgtatttatatgcccttgagacg
aagacaattacacgaggtgcggttcaagaattagtccctaagtctttggaacataatgtt
tttgacttaaccaacgaagtactttctggaaacagtgaaaaagctgttcaattgtatgaa
gatttacttttacaaggagaagaaaccattaagttaaatgcaatcttattgaatcagatt
cgcctttttctacaaacaaaaattttggctaagatgggctatcagcaagcgaatatcgct
gatacattaaaggttcatccttatcgagtcaagttagcgttacaacaagtccgacgattt
gaattgtctcgattagaaagactttatgatgaattagttgaaaatgattaccgcatgaaa
acgggccaaatggataaagaattactattccaattatttattttaaaattgactgcacaa
gcaaaataa
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