Enterococcus faecalis DENG1: DENG_03122
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Entry
DENG_03122 CDS
T03043
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
efn
Enterococcus faecalis DENG1
Pathway
efn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
efn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DENG_03122 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efn03021
]
DENG_03122 (rpoC)
03400 DNA repair and recombination proteins [BR:
efn03400
]
DENG_03122 (rpoC)
Enzymes [BR:
efn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DENG_03122 (rpoC)
Transcription machinery [BR:
efn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DENG_03122 (rpoC)
DNA repair and recombination proteins [BR:
efn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DENG_03122 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PRC
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AHI41937
LinkDB
All DBs
Position
complement(2847625..2851278)
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVIEPGDTTLEKKQLLTEREYREKREQYGQAFKAAMGAEAVKQLLD
NVDLDGEVAQLKEELKTASGQKRTRAIRRLDILEAFRASGNQPSWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MAIELFKPFVMRELVQREIATNIKNAKRKIERGEDEVWDILEEVIQEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMIFRDMNEAVLAWQNGYVHLHSRIGVQ
TTLLGDKPFTDWQKERILITTVGKIIFNEIMPVEFPYLNEPTDYNLTVQTPDKYFVEAGT
DIPAHIKEQELVLPFKKKNLGNIIAEVFKRFHITETSKMLDRMKDLGYKHSTYAGMTVGI
ADIMVLHEKQAIIDAAHKQVETITKQFRRGLITDDERYERVIGVWNGAKDEIQQKLIESM
EARNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLEIEAIREGNEIIEPLD
ERLLGRYTRKSVVHPETGAIIIGADQLITEDLAREIVDAGIEKVTIRSVFTCNTKHGVCK
HCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVITEVTGEVIDISEDPATRQKEVTIKGKTDTRTYTVPYTARMKVAEGDIIH
RGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKIR
VMDPGDTEILPGTLMDIAEFKDRNYDTLVAGGVPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNMEPKEVGVASENVYSIS
DIEAQMAAEDAMKNINK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgaaagtatgcaaatagggcttgcttcaccagaaaagatc
agaagctggtcttatggggaagttaaaaaacccgaaacaattaactaccgtacattaaaa
cccgaacgtgaagggttattctgtgaacgcatttttggtccaaccaaagactgggaatgt
gcttgtggtaaatataaacgtatccgttataaaggtattgtctgtgaccgttgtggcgtt
gaagtcactcgttcaaaagtacgtcgtgaacgtatgggacatattgaattagccgcacca
gtttcacatatctggtactttaaaggaattccatctcggatgggtcttgttttagacatg
agccctcgtgcattggaagaagtcatttattttgcttcatacgttgtcatcgaaccaggt
gacacaacattagagaaaaaacaattgttaacggaacgcgaatatcgtgaaaaacgtgaa
caatatggccaagccttcaaagctgctatgggtgccgaagccgtgaaacaattattagat
aacgtcgatttagatggcgaagttgcgcaattaaaagaagaattaaaaacagcttctggt
caaaaacggacacgtgccatccgtcgtttagacatcttagaagccttccgtgcttctggt
aaccaaccaagctggatggtaatggatgttatcccagttattccaccagatttacgtccg
atggttcaattggaaggtggtcgttttgcaacaagtgacttaaacgacttataccgccgt
gttatcaaccgtaacaaccgtctaaaacgtttattagacttaaatgcgccaagcatcatt
gttcaaaacgaaaaacggatgttacaagaagcggtcgatgctttaatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattgaaatctctttctcacatgttg
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgttgactattctggt
cgttccgtaatcgtcgttggtccgttcttaaaaatgtaccaatgtggtttaccaaaagaa
atggcgattgaattattcaaaccatttgtaatgcgtgaattagtacaacgtgaaattgcg
acaaacattaaaaatgcgaaacgtaaaatcgaacgtggcgaagatgaagtttgggatatc
ttagaagaagttatccaagaacacccagttttacttaaccgggcacctacgttgcataga
ttagggatccaagctttcgaacctgttcttgttgaaggtcgtgcgatccgtcttcaccca
ttagtttgtgaagcctacaatgccgatttcgatggagaccaaatggcggttcacgtgcct
ctaaatgaagaagcacaagcagaagctcgtatgttaatgcttgctgcccaaaatatcttg
aacccgaaagatggtaaaccagttgttacaccatctcaagatatggtcttaggtaactac
tacctaacaatggaagaagaaggccgtgaaggggaaggcatgatcttccgcgacatgaac
gaagctgttttagcatggcaaaatggctacgtgcatttacactcacggattggggttcaa
acaacacttttaggtgacaaaccatttactgattggcaaaaagaacgaatcttaatcacc
acagttggtaagatcatctttaacgaaatcatgcctgttgagttcccttacttgaacgaa
ccaacagactataacttaactgttcaaacaccagataaatacttcgtagaagctggtaca
gacattcctgcacacattaaagagcaagaattagttttaccattcaagaagaaaaatctt
ggaaatatcattgctgaagtcttcaagagattccacattacggaaacctctaaaatgctt
gaccgcatgaaagacttaggttacaaacactcaacgtatgctgggatgacggtagggatt
gccgatatcatggttcttcatgaaaaacaagcaatcattgatgctgcccacaaacaagtt
gaaacaattactaaacaattccgtcgtggtttaattactgatgacgaacgttatgaacgt
gtaatcggcgtttggaacggtgccaaagacgaaatccaacaaaaactgatcgaaagtatg
gaagctcgtaacccaatcttcatgatgtctgactctggagcccgtggtaacatctccaac
tttacacagttagctggtatgcgtggtttgatggccgctccgaatggacgaatcatggaa
ttaccaatcatctcaaacttccgtgaaggactttctgtcttagaaatgtttatctcaact
cacggggctcgtaaagggatgaccgatacggccttgaagacagccgattcaggttactta
acacgtcgtttagttgacgttgcccaagacgtaatcattcgtgaagacgactgtggcact
gaccgtggtcttgaaatcgaagccattcgtgaaggtaacgaaattatcgaaccattagac
gaacgtctattaggtcgttatacacgtaaatcagttgttcatccagaaactggtgcaatc
atcattggtgcggatcaattaatcactgaagatcttgcaagagaaatcgtggacgctggt
attgaaaaagtaaccatccgttctgtctttacatgtaacacaaaacatggtgtatgtaag
cactgttacggacgtaacttggcaactggttctgacgttgaagtcggagaagcagttggt
acaatcgccgctcaatctatcggggaacctggtacacagttaaccatgcgtacgttccat
accggtggggttgccggtgacgatatcactcaaggtttacctcgtatccaagaaatcttt
gaagcacgtaatccgaaaggacaagcagtgattacagaagtaaccggtgaagttatcgat
atttctgaagatcctgccacacgtcaaaaagaagtaaccatcaaaggaaaaacagataca
cgtacctatactgtcccttacactgcacgtatgaaagttgctgaaggcgacatcatccac
cgtggtgcaccgttgacagaaggttcaattgatccaaaacaattattacaagttcgtgat
gttttatctgttgaaaactacctattacgtgaagtacaacgtgtttaccgtatgcaaggg
gtagaaatcggcgacaaacatatcgaagtaatggttcgtcaaatgttacgtaaaatccgc
gtaatggatccaggtgacactgaaatccttccaggaacattaatggacatcgcagaattt
aaagaccgtaactacgacacattagttgctggtggcgtccctgctactagtcgtccagtc
ttacttggtattaccaaagcgtcattggaaacaaacagcttcttatctgctgcatccttc
caagaaacaacacgcgtgttaacagatgctgctatccgtggcaaaaaagatccattactt
ggattgaaagaaaatgttatcattggtaaaatcatcccagctggtactggtatggctcgt
taccgtaacatggaaccaaaagaagttggcgtagctagcgaaaacgtttatagtatttca
gacattgaagcacaaatggctgctgaagatgcgatgaaaaacatcaataaataa
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integrated database retrieval system
