Epinephelus fuscoguttatus (brown-marbled grouper): 125878768
Help
Entry
125878768 CDS
T08419
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125878768
03036 Chromosome and associated proteins [BR:
efo03036
]
125878768
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125878768
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125878768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125878768
NCBI-ProteinID:
XP_049416082
LinkDB
All DBs
Position
LG19:31637814..31684763
Genome browser
AA seq
1832 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHPGLDLQYEPSPWSSGSPCSSDSNSNWGKVLVDGSTDKPNNP
SSTNSSVWPPSSSSFSCSSSSSSSGCGSGSDPELASECMDADSSSSIGSEKNLAAVTTVM
MMSANASPSVSSTASSPSSSMVTSAMMVSVSVNGDSNGNARQVIGGGMGTISGASNGNNN
VTGSSHYSVAGSSSIGSNNMGNHNNKPVNNSGVWGSNMGTTGGSTPCINGGLNPNTLNPN
ANHGAWPQSSTPSPVPQGQRPTQAAGMGSKLGIAPQQAPTLGWGGMAAPNNSSMMEDTEV
NNGTASSKVLGSSNSGNGGLQPTNLNTESNGPNNTIMMNTTTTTTNATMTSSPPNSTASP
PLSGDCSWGSIGGGNGGPLANGNPSSAPQHPQGELGGPGAFGTPWGATTYPGDKGPPNAD
TVNPQNPALMQAGNPQISSTAAYKSNNNHNNTGAPRWDQGPANNPNQPQGNLSWGIGSNQ
LPGSAGQTPGNGNQTTMGPPAGIPRPWGSSASSSSSSSSSSSTSNNKMSNGEWGSTAPGN
NHSDAGSHKGSSANNGWKSLEDDAMGMGGGGGGGGSHGLGSVTGGWGRSGGSEGSGESSG
GRSSSDRDSQSKGGNRRKVNHPVPLAVCRTDVDPRVLSNTGWGQTPIRQNTSWDVNSPVN
KQLQGPRDERKHSSGGSGWGAPTPAAPSQTSGGWGGGPSSSGPGTGGSGWGDRPASGWDS
KGPASGGGGQSGWDDGSSYKGSNNSSNTWSNNINKDDRSNTWTNAPKPQQGWGSSSGNGS
EGWGNGDGARAGGSNHWGEPQKGASSAGWDSDSDRSGSGCWSEPSRTNTSSSNTWVGSGG
SNTPDQSTPNPGSNWGDSVHKPNPQSNSQGWGEPMKNNHGAQNWGEPNPKPSSEWGKGPE
SNMSRGSQAPNKPTGWLGGPMPTVGQKEEVATGWEEPSPESIRRRMEIDDGTGAWGDPGK
YSGGSVNMWNRTGQSDQEAVGPSSQHQSHSARSSMHPPQPIQPMAQDKSCSSGWGDPYPQ
KKESSTWEPPATPPVKVDNGTSAWGKPMDTSSSWDEPSRDNRESGSGWGKPAPGPKPMET
WGGEEASMGNSWDQEEEVEIGMWNNSQQDSRSHDQNTWNYKHKGSNKMNKPVNKQDEPWM
KPFINQFNSMNFSRDSPDDSMKTGAGMVQDKRMDMGSMGDFNGVMGKNPGSRHQLHKESA
MDRSPYYDKNVNPMMGGSSVAQGRGGLQSQAPPQPNPRNQVPPPILPSQVPPSLLKYPGG
NGGLNPLFSPQQVAMLNQLSQLNQLSQLNQINQLQRLLFQQQQQQQQKAQSQRAMPVGRP
TEQTRPIGSSPSMMQPPRHLDPSLLKQAPPHKPYLDNYLSHNNPEMQKDAAALGSFSNFP
LSLNSNLNVSLDMGVGGGSGGGAVSYKEPPQSRLKKLWATDPLEQNSKPGAMSSGLRLED
SPFYDFLSPGPSPLSPPGQSMGSVGDGWPPRANSPPPHGNTVTWPPEFRPGEPWKGYPNI
DPETDPYVTPGSVINTLSINTVRDTDHLRDRNNGPSSSLNTTMPSNSAWSSIRASSHSGS
LTSTAQSTSARPSESKWSPGGVSVSTPSLAHELWKVPLPPKALSVAAPSRPPPGLTSQKP
SSASSGWDGSALRLGGWGSTESRYTPGSSWGDSSSSGRTQWLVLKNLTPQIDGSTLRTLC
MQHGPLITFHLNLPHGNAVVCYSSKDEAAKAQKSLHMCVLGNTTILAEFASEEEINRFFA
QGQSLATPSSGWQAIGSSQSRMDQSHPFPSRAPEPNQWNSSDLHGSSLWGGPNYSSSLWG
SPSGTEAGRISSPSPISSFLPVDHLTGGGDSM
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattccgtcagccactcccctaatcaaacaggtctggagcatcct
ggcttggacttgcagtatgagccttccccctggtcctctggctctccctgcagcagtgac
agcaacagcaactggggcaaagtcctagtggacggaagcaccgacaaacccaacaacccc
tcttcaaccaactcttccgtctggcctccctcctcttcttcattctcttgctcctcgtct
tcttcctcctctggctgcgggtcaggatcagaccctgagctggcatcagaatgcatggac
gcagactctagctcctcgatcggctcagagaaaaacctcgccgctgtgacaacagtgatg
atgatgtcagcaaatgcttctccctctgtgtcttctacagcatcttctccctcctcctct
atggtgacttctgccatgatggtcagcgtttcagtgaatggagacagcaacggcaacgct
cgtcaggtaattggcggagggatgggaaccatcagcggtgcaagtaatggaaataataac
gtcaccgggtcctcccactactccgtggctgggtccagcagtattggcagcaataacatg
ggtaaccacaacaacaagcccgtcaataatagtggtgtatggggcagcaacatgggcacc
actggtggaagcaccccctgcattaatggagggttaaacccaaacactttaaacccaaat
gccaaccacggtgcctggccgcagagttcaaccccaagcccagtgccccagggccaacgg
cctacacaggctgcggggatgggttccaaactgggtatagccccccaacaggcccccacg
ctgggctggggtggcatggcagctccaaacaacagcagtatgatggaagacactgaggtg
aataatggtacagcaagcagcaaggtgttaggaagcagcaacagtggaaatggtggccta
cagcctaccaaccttaacactgaatccaatggaccaaataacactattatgatgaatact
actactactactactaacgccacaatgacctctagtccaccaaactctaccgcctcaccc
ccactcagcggggattgttcctggggctctattggaggagggaatgggggtccgctggcc
aatggaaacccctcatcagctcctcagcacccccaaggagagctggggggtcctggggcc
ttcggtacgccttggggcgcaactacctaccctggagacaagggccccccaaatgcagac
actgtgaacccccaaaaccctgccttaatgcaggctgggaacccccaaatctcctctact
gctgcttacaagagtaataataaccacaataacactggggccccacgctgggaccagggg
cccgccaataacccaaaccagcctcagggcaacttgtcctggggtatcggctcaaatcaa
ctcccaggctctgcaggccaaacaccaggcaatgggaaccaaactacgatgggccctcca
gcagggatacctcgcccctggggtagcagcgcgtcgtcttcttcctcgtcctcatcgtcc
tcttccacatctaacaacaagatgtcaaatggagaatggggatcaacagctcctggtaac
aaccattcagatgctggaagtcataaaggaagctctgccaacaatggctggaagagcctg
gaggatgacgccatgggcatgggaggtggagggggaggaggtggaagccatggcttgggg
agtgtcactggtggttggggtcgctctggaggaagtgagggaagcggagagagctccgga
ggccgatccagctcagacagagacagccagtcaaaaggggggaatcgcagaaaagttaac
catcctgtacccctagctgtgtgtcggacggatgtggacccgagggttctgtccaacact
ggatggggacagacgcccatacggcagaacacctcctgggatgtcaactctccagttaac
aaacagctccaaggtcccagagacgaaagaaagcatagcagcggaggctccggatggggc
gcaccaacaccggcagctccttcccagacctctggaggttgggggggtgggccgagcagc
tcaggcccaggtacaggaggttctggctggggggaccggccagcctctgggtgggacagc
aaaggcccagcgagcggaggaggcgggcagagtggctgggacgatggatccagctacaag
gggagcaacaacagcagcaacacctggagcaataacattaacaaagatgacaggtccaat
acatggactaatgctcccaagcctcagcagggctggggttccagtagtggaaatggaagt
gaaggttggggtaatggagatggtgccagagcagggggcagcaaccattggggggagccc
caaaaaggtgccagctcagcgggctgggacagcgacagcgaccggtcaggctctggatgt
tggagcgagccaagccgaaccaacaccagcagcagcaacacttgggtggggagcggagga
tcaaatactccagaccagagcactccgaacccaggctccaactggggcgactcggtccac
aaacccaaccctcagagtaacagccagggctggggtgagccaatgaagaacaaccacgga
gcccagaactggggtgagccaaatcccaaaccctccagcgagtggggaaaaggtcctgaa
tccaacatgtccagaggcagtcaagctcctaacaagccaacaggctggctgggaggcccc
atgcccacagtaggtcagaaggaggaagtggcaacagggtgggaagagccttctccagag
tccattcgccgaaggatggagatcgatgatgggacaggagcttggggagaccctggtaaa
tacagcggtggatctgtcaacatgtggaacaggactggccaatccgaccaggaggctgtg
ggtccatcctctcagcaccagtcccactcagctcgcagctcgatgcatcctcctcagccc
attcagcctatggcacaggacaaaagctgcagttctggttggggtgacccttaccctcag
aagaaagagtcctccacgtgggagcctcccgccactccacctgtgaaagtggacaatgga
acgtctgcctgggggaaacccatggacaccagctccagctgggatgagcccagcagagat
aacagagagtctgggtctggatggggcaagcctgctccaggtcccaagcccatggagaca
tggggtggtgaggaggcgtccatgggcaatagctgggaccaggaagaggaggtggagatc
ggcatgtggaacaacagccaacaggacagcagatcccacgaccaaaacacctggaactac
aagcataaaggctccaacaagatgaacaaaccagtcaacaaacaggatgaaccctggatg
aaacccttcatcaaccagttcaacagcatgaacttctctagagactctcctgacgactcc
atgaagacaggagcagggatggtgcaggacaagcgcatggacatgggcagcatgggagac
ttcaatggagtgatggggaagaaccctgggtctcgtcaccagctccacaaggagtctgcc
atggatcgcagcccttactatgacaagaatgtaaaccctatgatgggtggcagcagcgta
gcacagggccgaggtggcctccagtcccaggccccaccccaacccaacccccgtaaccaa
gtgcctccacccatcctgccctctcaggtccctccatccctgttgaagtacccaggaggt
aacggaggtctgaaccctctgttcagccctcagcaggtggctatgctcaaccaactgtcc
cagcttaaccagctgtcgcagctcaaccagatcaaccagttacagcgtcttctcttccag
cagcagcagcagcaacagcagaaagctcagagccagagagccatgcctgtgggacgaccg
actgaacagacacgtcctattggttcgtctccatcaatgatgcagccgccgcggcacctg
gacccctccctgctgaaacaggccccaccccacaaaccatacctggataactacttgtcc
cacaataacccagagatgcagaaggatgctgctgctctcggatccttcagcaacttccct
ttaagcttgaactctaacctgaatgtatccctggacatgggtgtcggtggaggtagtggt
ggtggagctgtgagctacaaagagccgccccagtccagactgaagaaactttgggctact
gaccctctggagcagaacagcaaacctggtgctatgtcgtctgggctgcgtctggaggac
tctcccttctatgacttcctgtctcctggcccatctcccctgagtcctcccggccaatca
atgggctcggtgggcgatggctggccgccccgtgccaactcccccccgccccatggaaac
actgtcacctggcccccagagttccggcccggggagccttggaaaggttaccccaacatt
gaccctgagactgacccttatgtgacccccggcagtgtcatcaacaccctctccatcaac
accgtccgcgacacagaccacctcagggacaggaacaacgggccatcctcatcactgaac
accacgatgccttctaacagtgcctggtcatccattcgtgcctccagccacagcggttcc
ctcaccagtacagcacaaagcacttcagccagacccagcgagtcaaagtggtctcccggc
ggcgtttctgtgtccaccccctccctggcccatgagctgtggaaggtccccctgcctccc
aaggcgctgtctgtggccgccccctccagaccaccacccggcctcaccagccagaagccc
agctctgcctcctccggctgggacggctctgccctgaggctggggggttggggctccact
gagtccagatacacacctggttccagttggggtgacagcagcagctcagggagaacccaa
tggcttgttctaaaaaatctcacacctcagattgacggctctaccctgaggaccttgtgc
atgcagcacggccctctgatcacattccacctcaacctgccgcatggtaatgctgtggta
tgctacagctccaaggatgaggccgcgaaggcccagaagagcctgcacatgtgtgttttg
gggaacactactattctggctgagtttgccagcgaggaggaaatcaaccgtttctttgca
caagggcagtcattggccactccctcctccggctggcaggccatcggctcctctcagagc
agaatggatcagtctcacccctttcccagccgcgctcctgaacccaaccagtggaacagc
agcgatctccacggctcctccctctggggcgggcccaactattccagtagcctgtggggg
agccccagcggcaccgaggcagggaggatcagcagcccttctccaatcagctccttcctc
ccggtggatcacctgacaggcggcggggactccatgtga
DBGET
integrated database retrieval system
