Epinephelus fuscoguttatus (brown-marbled grouper): 125879054
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Entry
125879054 CDS
T08419
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125879054 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125879054 (smarca4a)
03036 Chromosome and associated proteins [BR:
efo03036
]
125879054 (smarca4a)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125879054 (smarca4a)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125879054 (smarca4a)
Chromatin remodeling factors
BAF complex
125879054 (smarca4a)
PBAF complex
125879054 (smarca4a)
GBAF(ncBAF) complex
125879054 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125879054
NCBI-ProteinID:
XP_049416609
LinkDB
All DBs
Position
LG19:36260242..36284876
Genome browser
AA seq
1643 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYAQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPPGPGAGPMEGSGDPNQGMGQPNRGGPQGPGG
PGGAGGGPGGAGGPAPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQ
QPMPNMPPSAGPGGGPGAGPGPAQANYNRPHGMVGPNMAPPGPAGVPPGMQGQPTNGPPK
SWPEGPMVNAATPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
MLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKK
KKKKKPEAVEGGAPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGMDAPKAGQLDTWL
EMNPGYEVAPRSDSEDSSSEEEDEDEEEEEEQPHSSATAAEEKKKIPDPDSEDVSEVDVQ
HIIEHAKQDVDDEYGNAAFNRGLQSYYAVAHAVTEKVDKQSTLLVNGQLKQYQIKGLEWL
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKW
APSVVKVSYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHR
MKNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA
PFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQR
VLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGY
SGGIVSGPDLYRSSGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLR
LDGTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQ
AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGCERRA
FLQAILEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRR
EEARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTE
KQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDEEVKKAKK
RGRPPAEKLSPNPLSLTKKMKKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRK
PVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQK
IEKDDESEGEESEEEEEDVDEGSESESRSVKVKIKLSRKEKGERGGKGQRRRGRGARAKP
VVSDDDSEEEQEEERSASGSEED
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccgatgggagggacacctcggcccggaccctccccaggacca
gggccatctccaggaggcatgatgggcccgagccccggtccctctccaggctcggcccac
agcatgatggggcccagcccgggacctcctggatctggacatccccatcctccacaggga
ccctcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcat
gagaagggaatgcccgatgacccccgctatgcccagatgaagggcatgggcatgagacca
gggggccacagtgggatgggaccccctccgagcccgatggaccaacattcccaaggttac
ccctctccactgggaggctcggagcacgcacccagccctgtcccagccaacggccctccc
tctggccccatgatgcctggaggtccccctggccctggggcgggccccatggagggcagc
ggggaccccaatcagggaatgggtcagcctaaccgcgggggaccccagggtccaggtgga
cccggtggcgcaggaggtggaccaggtggtgcaggtggacccgctcctttcaaccagaac
cagctgcaccaactcagggctcagattatggcctataagatgctggcacgcagtcagccg
ctaccggagcacctgcagatggctgtgcaggggaagaggcccatgccggggatgcagcag
cagccgatgcccaacatgcccccatctgcagggcccggaggtggaccaggagctggtccg
ggacctgctcaggccaactacaacagaccacatggtatggtaggtccaaacatggcgcct
cctggacctgcaggagttccccctggtatgcaaggccagcctaccaatggaccccccaaa
tcatggcctgaaggaccaatggtgaatgccgccaccccctctaatcctcctcagaaactg
attccgcctcagcccaccggcagaccatctcctgctcctccttctgttccccctgctgcc
tccccagttatgccccctcagacacagtccccaggacagcccgcccagccccctcccatg
atgcttcaccagaaacagaaccgcataacccccatccagaagccccgcgggctggaccca
gtggagatcctccaggagagagagtacaggctacaggctcgtattgctcaccgtatccag
gagctggagaacctgccgggctctctggccggtgacctgcgcaccaaagccaccatcgag
ctcaaggccctgcggctgctcaacttccagagacagctgcgtcaggaggtggtggtttgc
atgcgacgtgacactgctttggaaactgccctcaacgcaaaggcctacaagcgcagcaaa
cgtcagtctctacgtgaagcccgcatcactgagaagctggagaaacagcagaagatcgaa
caggagcggaaacgacgccagaaacaccaggaatacctcaacagcatcctgcagcacgcc
aaggatttcaaggagtaccaccgctccatcacagcaaagatccagaaggccaccaaagct
gtcgccacctatcacgccaacactgagcgcgagcagaagaaggagaatgagcgaattgag
aaggagagaatgcggaggctgatggctgaagatgaggaaggctaccgtaaactcatcgac
caaaagaaagacaagcgtctggcgtacctgctacagcagactgacgagtacgtggccaac
ctcacggagctggtgcgtgcccacaaagctgtacaagctctcaaagagaagaaaaagaag
aagaaaaagaagaagccagaggctgtggagggtggcgctcctgctctgggacctgatgga
gagcctttagatgagaccagtcagatgagtgacctcccggtgaaggtcatccatgttgac
agtggaaaaatcctgactgggatggacgcaccgaaggcgggccagctggatacctggctt
gaaatgaaccccggatacgaagtagcgccgcgctcagacagtgaagacagcagttcagaa
gaggaggatgaagacgaggaggaggaggaggagcaaccgcattcatctgcaactgcagca
gaagagaagaagaagattcctgaccctgacagtgaagacgtgtctgaagtggacgtccag
cacatcatcgaacacgccaagcaggatgtcgatgatgagtacggtaacgcagctttcaac
cgaggcctgcagtcctactacgctgtggctcacgctgtcactgaaaaggtggacaaacag
tccacactgctggtcaacgggcagctcaagcaataccagatcaaaggtttggagtggctg
gtgtcgctttacaacaacaacttgaacggcatcctggctgatgagatgggtttagggaag
acgatccagaccatcgccctcatcacttacctcatggagtacaagcgcctcaacgggccc
ttcctcatcatcgtacctctctcaactctatcaaactgggtctatgagtttgataagtgg
gccccatctgtcgtcaaagtctcctacaaggggtctccagctgcccgtcgtgctttcgtt
cccattttgcgcagcggcaaattcaacgtgctgctaacaacatacgagtacattatcaaa
gataagcaggtgttggcgaagcttcgttggaagtacatgattgtagacgagggccatcgc
atgaagaaccaccactgtaaactgacccaggtcttgaacactcactacttggcgccacgc
cgtctgctgctcacaggcacaccgctgcagaacaagctacctgagctctgggcgctgctc
aacttcctcctgcccaccattttcaagagctgcagcacattcgagcagtggttcaatgcc
ccctttgccatgactggagagaaggtcgacctgaatgaagaggagaccatcctgatcatt
cgacgtttacacaaggtgctcaggccgttcctgctgcgccgactcaagaaggaagtcgag
gctcagctgcccgagaaggtggagtacgtgataaagtgcgacatgtcagctctacagagg
gttttgtacagacacatgcaggccaagggtgtcttgctcacagatgggtcagaaaaagac
aagaagggtaaaggtggcacgaagaccctcatgaacactatcatgcaactgagaaagatt
tgcaaccacccctacatgttccagcacatcgaggagtctttctctgagcatcttgggtac
tctggtgggatcgttagtggccccgacctgtaccgctcctctgggaagtttgagctgctg
gaccgcatcctgcccaagctgagggccaccaaccacaaagtgctgctcttctgtcaaatg
acgtccctcatgaccatcatggaggactactttgcctaccgtaacttcaagtacctgcgt
ctggacggaaccaccaaggcagaggaccgtggcatgctgctgaagacattcaatgacccg
gcctcggagtactttgtgttcctgctcagcaccagggcaggaggcctgggcctcaacctg
cagtctgctgacaccgtcatcatcttcgacagcgactggaacccacatcaggacctgcag
gctcaggacagagcccaccgtatcggtcagcagaacgaggtgcgcgtgctccgcctctgc
accgtcaacagcgtggaggagaagatcctggcggccgccaagtacaaactgaacgtggac
cagaaggtcatccaggccggcatgttcgaccagaagtcgtcaggctgcgagcgtcgggcc
ttcttacaggccatcctggagcacgaggaacaggatgaggtcggggctcgaggaggctgc
cgcactaggggggcgtgggaggaggatgaagtgcccgacgatgagaccgtcaatcagatg
atcgccagaagtgaggaggagtttgaacagttcatgcgtatggatctagacagacgccgc
gaggaggcccgcaaccctaagaggaaaccccgtctgatggaggaggacgatatgcccagc
tggattctgaaagacgacgctgaggttgagaggctaacctgcgaagaggaggaggagaag
atgtttggcagaggatcccgccagcgtaaggaagtggactacagcgactcgctgactgag
aagcagtggctcaaggccatcgaagagggaaatctggaggacatcgaagaggaagtgcgt
cacaaaaagacaaccagaaagaggaagagagaccgcgaccatgacggcggcccagccacg
cccagctccagcagtggccgagggcgggacaaagacgaggaggtgaagaaagcaaagaag
cgaggtcgcccgcctgctgagaagctctctcccaaccctctgtctctcaccaagaagatg
aagaagatcgttgatgctgtcatcaaatacaaagacggtaacggccgacagctgagcgaa
gtcttcatccaactgccttcacgtaaagagctgcctgagtactacgagctcatccgcaaa
ccagtggacttcaggaagatcaaggagaggatcaggagccataagtaccgcagcctgaac
gacctggagaaggacgtgatgttgctgtgtcaaaacgcccagacttttaacctggagggg
tctctgatctacgaggactccatcgtgctgcagtctgtcttcaccagcgtgagacagaag
attgagaaggatgacgagagcgaaggagaggaaagtgaggaggaggaggaggatgtagac
gaaggctctgagtctgaatctcgttcagtgaaggtgaagatcaagctgagccggaaagag
aaaggagagcgaggaggaaaaggacaacgacggaggggccgcggtgcccgggctaaacct
gtggtgagcgacgatgacagcgaggaggaacaggaagaggagcgctcggctagtggcagt
gaggaagactga
DBGET
integrated database retrieval system
