Epinephelus fuscoguttatus (brown-marbled grouper): 125879076
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Entry
125879076 CDS
T08419
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04120
Ubiquitin mediated proteolysis
efo04137
Mitophagy - animal
efo04144
Endocytosis
efo04340
Hedgehog signaling pathway
efo04350
TGF-beta signaling pathway
efo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125879076 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125879076 (smurf1)
04350 TGF-beta signaling pathway
125879076 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125879076 (smurf1)
04137 Mitophagy - animal
125879076 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
125879076 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125879076 (smurf1)
04121 Ubiquitin system [BR:
efo04121
]
125879076 (smurf1)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125879076 (smurf1)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125879076 (smurf1)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125879076 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
125879076 (smurf1)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
HECT type E3
125879076 (smurf1)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125879076 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125879076
NCBI-ProteinID:
XP_049416646
LinkDB
All DBs
Position
LG19:complement(34429488..34453367)
Genome browser
AA seq
732 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQAPQMDVGGEEGGNGGVGGGGGGVDGDVAARYERDLVHKLKLL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHY
INGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKF
LQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDH
KELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGST
RVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtt
gtggtggacggatcaggtcaatgccactcaacagacacagtcaagagcacactggacccc
aaatggaatcagcactatgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaagaagatccataaacgacagggggcgggcttcctgggctgcatacgactg
ctttccaatgccatcagcaggctaaaagacacaggataccagcgactggatctatgtaag
ctgaacccgtcggacagcgacgcagtgcgggggcagatagtagtgagcttacagacgcga
gaccgcattggcagcggaggccccgtggtggactgcagaggactgttggaaaatgatgga
cctgtgtttgagggatgcttcagtgaagagccacttccctactccgacccaactggcgcg
gcggggggcgggaactgtcgactcgactcgcccagtcaggagggccgcctacagacgcag
cgaatcagagggcaggactcgagaggccacggccacacccctcagaacagacctcacggg
caccaaccgcctgacctgccagagggctatgagcaacgaacaacagtgcagggccaggtg
tacttccttcacacacagacgggagtcagcacttggcacgaccctcggataccgcgggac
ctggccagcgtgagctgtgaggagcttgggccgttgccagtgggctgggaggtccgaagc
accgtgtcgggccgaatctactttgtggaccacaacaaccgaacgacacagttcacagac
ccgcgcctacacaccattatcagccagcaatcccaagcgaaggaatcctcacaagccccc
cagatggatgtggggggtgaggaagggggtaatggaggagtgggcggaggaggaggagga
gtcgacggagacgtggcggcacgctacgagcgagacttggtccataagttgaagctgctc
cgacacgagctgtccttgcagcagcctcaagcaggacactgtcgcatcgaggtgtcccga
gaggagatctttgaggagtcatatcggcagataatgaagatgaggcccaaagacctaaag
aagcgtctgatggtgaagttcaggggagaggagggcctagactacggtggggtggccagg
gagtggctgtacctgctgtgtcatgaaatgttgaacccctattacggcctgttccagtac
tccacagacaatatctacacactacagatcaaccccgactcctccattaaccctgaccac
ctgtcatatttccacttcgtgggtcgtgtgatgggcctggcagtttttcacggtcactac
atcaatgggagcttcacgcttcctttctacaaacagctgctaggcaaaccaatccagctc
aacgacctggagaccaccgacccggagttgcacaagagtctcgtctggatattagagaac
gacatcacctcagtcctcgaccacacgttctgcgtggagcacaacgcctttgggaagttc
ttacaacatgaactcaaacctaatggccgcaatattcccgtcactgaggagaacaagaag
gaatatgtaagactttatgtgaactggaggtttatgcgtggaattgaagcccagtttctg
gctctacagaagggattcagtgagctcatcccccagcacctcctcaaacctttcgaccat
aaagaacttgagttgatcatcggtggactgggtaagatcgatctcgcggactggaagacg
aacacccgcctgaagcactgcacaagtgaaagcaacgtggtgcggtggttctggcaggcg
gtggaggccttcagtgaagagaggagaggacgcctcctgcagtttgtcacgggctccacc
agggtcccattacaaggcttcaaggcgctgcagggttctacaggttctgcaggaccaagg
ctctttaccatccatttgatagacgccaacacagacaaccttcccaaggctcacacatgt
tttaaccggatagacatccctccctatgagtcttacgagaaactctacgagaaactgctg
acggctgtggaggagacctgtggcttcgctgtggagtga
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