Epinephelus fuscoguttatus (brown-marbled grouper): 125879301
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Entry
125879301 CDS
T08419
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03420
Nucleotide excision repair
efo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125879301 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
125879301 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
efo03051
]
125879301 (rad23aa)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125879301 (rad23aa)
Proteasome [BR:
efo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125879301 (rad23aa)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125879301 (rad23aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
DUF3306
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
125879301
NCBI-ProteinID:
XP_049417088
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Position
LG19:38461290..38475587
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AA seq
365 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDYFPVSGQKLIYAGKILQDDTPIK
EYNIDEKNFVVVMVSKAKPAAAASPPASEAPKPPVQDSGSTSTAVPATAPASAPAPTPAA
VPIPSEEAKEEPSAAATEPQQPASSSGRGQGLDASSALVTGAEYEAMLTEIMSMGYERER
VVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPASGPTEAPSLAEGENPLAFLRT
QPQFLHMRQAIQQNPGLLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEAGDAPEV
GEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQ
GLEDD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactctgaaaacactgcagcagcagacgattcagattgagatagaccccgaa
caaacggtgaaggccttgaaagagaagatagaagcagaaagaggaaaagactactttcct
gtatctgggcagaagctgatatacgccgggaaaatcctgcaagatgacacaccgattaaa
gaatacaacatcgatgagaagaactttgttgtagtgatggtttccaaggctaaacccgca
gctgccgcctcgcctccggcctcagaagcacccaaaccccccgtacaggactctggctcc
acgtcaacagctgtccccgccacagccccagcttcagccccagccccgacccccgcagct
gtccccattccctctgaggaggccaaagaggagccaagtgccgcagccacagaaccacaa
caaccagccagctccagtggcaggggtcagggtctggatgcctcctcagcgctcgtgact
ggagccgagtacgaggccatgctcacagagatcatgtccatgggctacgaaagggagcga
gtggtggcggcactacgggccagtttcaacaacccccacagagctgtggagtacctcctc
actggtatccccagcagcccggtgcaggagagtaatcccccggcgcaggcccccgcgtcc
ggacccacagaagccccgtctctagcagagggagagaacccacttgcattcctgcggact
cagcctcagttcctgcacatgagacaggccatccagcagaaccctggtctgctaccagct
ctgctccaacaactaggcagggagaaccctcagcttctacagcaaatcagtcagcatcag
gagctgttcatccagatgttgaacgagccggtgggagaggcaggagatgcgccagaagtc
ggagagatgggagcagccggggaggagggcgcacctgtcaactatatccaggttacacct
caggagaaggaagcaatcgaaaggttaaaagcgttgggtttcccagaggccctggtgatc
caggcctactttgcctgcgagaagaacgagaacctggcggccaactttctcctcaaccag
ggactggaagacgactga
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