Epinephelus fuscoguttatus (brown-marbled grouper): 125879566
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Entry
125879566 CDS
T08419
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04120
Ubiquitin mediated proteolysis
efo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125879566 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125879566 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125879566 (mgrn1b)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125879566 (mgrn1b)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125879566 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125879566
NCBI-ProteinID:
XP_049417471
LinkDB
All DBs
Position
LG19:complement(21509173..21521918)
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AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHEEHSSTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGLGGDSRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MHSGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLSP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccattctgagtcgcagaatcgctggcgttgaggatatcgatatccaggccaac
tcggcctatcgatttccaccgaaatctgggaattattttgcgagccacttcttcatggga
ggagagaaatttgacacaccacatccagagggatacctttttggagaaaacatggacctg
aattttcttggaaataggccagtgcagtttccatatgtgacgcctgcaccacatgagcct
gtgaagaccctgaggagcctggtgaacattaggaaggactctctgcgtttggtcaggtat
aaagatgactctgacacaccggtggaggaaggcggaaaaccaaaggtccagtatggtgtt
gagttcacctttgacgcagatgctcgggtggccatcaccctctactgccaagcgtttgag
gagttctccaatgggatggcagtgtacagcccaaagaatccatcgctggtctctgaaact
gtgcattacaagcgcggcgtgagccagcagttctccatgccgtctttcaaaatagacttc
agcgagtggaaagaggaagatctgaactttgacctcgaccgaggagtgtttcccatggta
atccaagctgtggttgacgaaggggacgattgcctcggacatgctcacgtgcttttggca
gcctttgaaagacacgttgatggcagtttctccgtcaagcctctgaagcagaagcaaatc
gtggaccgtgtgagctacctcttacaggagatctatgggattgagaacaaaaacaaccaa
gaaaccaagccatcagatgatgagaacagtgacaacagcaacgagtgtgttgtctgtctg
tctgacctgagagatacactcatcctgccctgcagacacctgtgtctctgtaactcctgc
gcagacactctgcgctaccaggccaacaactgtccgatctgcaggctgcccttcagagcc
ttgctgcagatcagagctgtgaggaaaaagcccggtgctctttcccctgtgtccttcagc
ccagtcctggctcagactatggaccatgaggagcactcaagcacagactcggttcctccc
ggctttgaacccatctcgctgttggaagctctgaatggtctgcggtcagtgtctcctgcc
atcccatctgcccccctctacgatgagatcaatttctcagggggtctgggaggtgacagc
agacagctgagctccccagaacatttaagtgatggaagtctgcagaagggcaaagtcagc
aagtcacctgacagcacccttaggtctccatcctctcccattcaagaggaagatgaggag
aagctatctgagatgtctgacgctcagccacacacactgctgtccagcagccccgccccc
actgacgccacagccaccgaggacgtggcagagtccctgtctccagatgatgaggacagg
atgcattctggaggagacatcctacaggactgcagcagtgagcacagcagcttgaccaaa
acagagagcgacccaccgggcgatttgtctctgccagggtcatccgagtcaacagaaagc
ctgaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacgagcagcctt
catatggaagatgagcacctcagcccctga
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