Epinephelus fuscoguttatus (brown-marbled grouper): 125879590
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Entry
125879590 CDS
T08419
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03013
Nucleocytoplasmic transport
efo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125879590 (casc3)
03015 mRNA surveillance pathway
125879590 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125879590 (casc3)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125879590 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
125879590
NCBI-ProteinID:
XP_049417508
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All DBs
Position
LG19:complement(7938097..7957088)
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AA seq
774 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATSKGRARDPEPPVVTAARPEAKSESE
CESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEEVEQYSDEEAPAAASEPKPSADESST
KVEEVVEDGEDEEKEAEREGGGRSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGGKP
GQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGSGDRPYRQRRPRQNTSPNRDKRWRDGGGERPVRSWQSG
GGGLNRGGTPPSSNHPSSTSPSSVPLSSAQRGSNPSRPPPSRSRPSHQNQMHLPPQSQYR
NNESNIPQMHPRERQGPKAQSDPTGDRGGVSRGGRGGGGGGGRGPSVVIEDIAVSQGGVR
EQDLSVVTTAASSQPGGYQSTSPRRQQQEQRGSADRSAAGSTAPSSTSDPSLQTSATNRE
ASPPTERPVERKSYSLARRTRSRPADLGSKQPSMEESAAGGNTSSPGGVVGKSWAGASDG
PSQAGGGGGGLTELDQDVARLSLVGQSWSQSPSSYMRSEMRGLPSTMHIPSGPPQFSGME
EMGVGSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYGDGPAPIPPQGML
VQPEMHIPHPGLHPHQSGGPIANPALYGGPTVSLSPGQPQQLLPPPFYPPPGVMTFPYPT
MYPSPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPELHFASE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggggtccccggcgaccagtaagggccgagca
agggatcccgagccgccggtggtgacagcggcccggcccgaggcgaagagcgagtccgag
tgtgagagtgaagatggtgtaggagaagctgtcctctctgactacgacagtgccgatcca
gaagaaaatggctcccattcagagggagttgaggaggaagaggaggttgaacagtacagt
gatgaagaagctccagcagcagccagcgagcccaaaccctcggcagacgaaagctcaaca
aaggtagaagaggtggtggaggatggggaggatgaagagaaggaggcagagagagaggga
ggtggaaggagtaaagaggagagcaaggcagaggagaaaggaaaccttgctggagagaga
cagagcggtgacggacaggagtctacagacgaccctgagacaaaggcgggaggaaaacca
ggtcagaagctcgacgatgacgaggacagaaagaaccctgcctacatcccaaggaagggt
ctgttcttcgagcacgatgtcagagggcatgctcaggaagaggagagacctaaaggtcga
aacaggaagttgtggaaggatgagggtcgctgggagcatgacaagttcagggaggaggaa
caggcgccgaagagccgcgaggagcttattgcaatctacggctatgacatcagaaatggt
ggtggctccggagaccgaccataccggcagcgcaggccgagacaaaatacatctcccaac
agagacaagcggtggagagatggaggaggagagcgaccggttcgatcatggcagagtgga
ggaggaggtctaaaccgaggaggaactccaccttcatcaaaccacccctcctctacatcc
ccctcctctgttcctctttcctctgctcagcgtggcagcaatccctccagaccacctccc
tctcgcagcagaccatcccaccagaatcaaatgcaccttccgcctcagtcacagtacagg
aataatgaatcaaacataccccagatgcaccctagggaacgacagggccctaaagctcag
tctgacccaacaggagacaggggtggggtcagcaggggaggacgtggtggtggtggtggt
gggggaagggggccttctgtggtcattgaggatattgcagtcagccaaggaggcgttagg
gaacaggacctaagtgttgtaacgacagcggcatcgtcgcagccaggcggttaccagtct
acatcaccaagacgacagcagcaagaacagcgagggagcgctgatagatctgcggcagga
tcaactgctccctcctccacctctgacccctcccttcagacatcagcgaccaatcgggaa
gcctctcctcccaccgagcggccggtggagcgtaaatcttactctctggcacgcaggact
cgctctcggcccgctgacctgggcagcaaacagccatctatggaggagtctgcagctgga
gggaacacctcctccccaggcggcgtggtgggaaagagctgggcaggagcaagcgatgga
ccgagtcaggcgggtggaggaggtggagggctgacagagctggaccaggatgtggctcga
ctcagtctggttggacagagctggagccagagcccatcatcctacatgcggtctgagatg
agaggcctccctagtaccatgcacatccccagtggcccgccccagttctccggcatggag
gagatgggtgtcggctccaatcgagccaaacgctactcatcccaacgtcagagagccgta
cctgagccagcaccaccgatgcacctgggagtgatggagggacactactatgaacccatg
tcgtaccagggaccaatctacggggacggccccgcccccatcccgccacagggcatgctg
gtccagcctgagatgcacatcccccatcctggtctccatccccatcagtcgggcggcccg
atcgctaaccccgccctctacggtggcccaactgtttctctgtctccggggcaaccgcag
cagctgctgccaccgcctttctaccctccaccgggggtcatgacctttccttaccccacc
atgtacccaagtccacagggccaggcccaggtgacctacggaggtgtgacatactacgac
acgatgcagcagcaagctcagcccaagccttcacctccccgccgcacatcccagcccgtc
actgtcaagcccccccctccggagctgcacttcgcctcagagtga
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