Epinephelus fuscoguttatus (brown-marbled grouper): 125879693
Help
Entry
125879693 CDS
T08419
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
efo01001
]
125879693 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
efo04054
]
125879693 (ciita)
Enzymes [BR:
efo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125879693 (ciita)
Protein kinases [BR:
efo01001
]
Serine/threonine kinases: Other
TAF1 family
125879693 (ciita)
Pattern recognition receptors [BR:
efo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125879693 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
LRR_8
nSTAND3
nSTAND_NTPase5
AAA_16
AAA_22
NB-ARC
TsaE
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
125879693
NCBI-ProteinID:
XP_049417644
LinkDB
All DBs
Position
LG19:31173802..31200190
Genome browser
AA seq
1614 aa
AA seq
DB search
MTQFEEVLDGVRLALTWASPTEIQALLEDLVEGQIISEAYGKSLIWQQLTEGIAPAACKA
GSDLRGLTTHWHLDQGQLSQVKNLGSGNSIGRAVSSVDEHDSMRSRLKIHPLSEHQVDPK
LNQELRGGPVTDELFNLFSTPMGRDYQCSLGFDDENTELLRSAELMQKPVSDNERVFKGN
LEDEEEWLEQVEEAARRIAVPLWQHWDRGQKMLLPLVPASMTAAGCATSENTARDGEAQR
PVLNMEEETELAIACRTLDADNFDYTEMGMTDPSFTMCTDGAAKGLCVSTYDAVATTGLN
HLNISGAERNASPAQACAATVTNITDRLQGILDACRVADSTTEVDLLCLMEGAQCGTDVG
FTEDIAHLFSPCAPTDTQTDAQDDSFYSSVDQNMTLDNVENVCRAEERVDSQWGAKMQDI
SQDPFLCLGDLPDDLSEFLNDDYLGKFVDTGALFDDPCLNCEEELTTCCDLPPPMELPGF
DSLQQIQEDKVTSTTNTRRKRSRGRPKTEEPQAELTVTQDTDTGSELSSPETAAPPSTPP
RILHLHPSIQFITIPDNPGYQVVQTLSLSPPVITLPLPNTAAAPTYILVPAASPPFKRQV
PPLSPIDGAVAPVQMSSSPLGSLSETASTAMSPTCASPQSPSTEMSACKESPLPQSPTVI
DIPQVVKDYIQEAKAHMSQTCQDMEAGLSLTSHYVDVPVSQRETRSGKSTNKTLDKELII
MGDTDRQKTLLGPSQIFEGSNVDKPKRYIVLLGNAGMGKTTLIRKLCLDWSRDRIPQFDF
VFLLDGKSLSLTEATFSLKTLLLNLSSFAPSCMDPEAVYAQILAAPKRVLIIFDGFGELR
DFETLLQTQEKDIVASLQKDSKAQNFTVRHLYSGILQRMLLPGCTLLLSTRPKGTATQLL
RRTDSILEVCGFNPTDVETYLSQYFTDPDLRASALDSLKDCSYLHLLCWNPGLCRLVCLV
LEQCKSSEDLPRTLTGLCHQVLRLIMEMDRKSMHSQAESQSETSMQTEEEAQTEISSSSQ
AKTQHKNTRRKSRAQVRPGSHTQRARRTKKQDKEEDDGDGEGMRSAGEEADRTEEKELLS
QLSSLAWESVKANTCTLPTGRTISAKLKAFGHRTGLFFSCHLRAGQVVPSGETEGGGRED
SEEMGTGKNGKKGTVTEHADTSDDHILLWANPFLQSYLAGVHLSLSRTITDRAFHPTLPF
QSGQKGRRRPQREELELTQRFAVGLLFHDRTELQRLHSHTEKTFRDMVAAKQALVTKHLE
GLSYSDLSPAQVLEACHYVYEANSTHGDGNRDSGSTQLVAHLAANLPEVLTFRGVPLKPS
DVFTVQHVLEKGGTEGRRFCLDLEDSGIQISGLRALIGLNNINTYRACIADVITLWEQLE
QSGEEGLLQGTVSKFKIHPLKATQVCHIEHLAKLVNIHVHKRLSDSSSQSDSILAEGIPA
VKELRKLEFDLGPEKGPLALLKLWGLLPGLQNLQHLDLENSKIGDKGAEKLADALVSLSS
LEILNVSQNCIGDQGMKRLATTLRDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTDL
DVKYNKLTDVGAQSLAASLRNCKKMKTLRMWNQCIPYGVFERLQHQDNRIQSWQ
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttgaggaggtcctggacggagtgcggctagctctaacctgggcctctccc
accgagatccaagcgctcctggaggatttggtggaagggcagataatctcagaggcctat
ggcaagagcttgatttggcagcaacttactgaggggatcgcacctgcagcgtgtaaagcg
ggatctgatctgagaggattgaccacacattggcacctcgaccaaggtcagctcagccag
gtgaagaatttagggtcaggaaattctataggaagggctgtatcatcagtggatgaacat
gacagcatgaggtctaggctaaaaattcatcctcttagtgaacatcaagttgatccaaaa
ctaaatcaagaattgaggggaggaccggtgacggacgaactcttcaatctcttttctacc
ccgatgggacgtgactaccagtgcagtcttggttttgatgacgaaaatacagaactgctg
aggagtgcagaattaatgcagaagccagtaagtgataatgaaagagtgtttaaggggaat
ttggaagatgaggaggagtggttagagcaggtagaggaggcggctaggaggatagctgtt
cctctgtggcagcactgggacagaggacagaagatgctgctgccactggttcctgccagc
atgactgctgccggctgtgcaacaagtgaaaacacagcaagagacggtgaagcacaacgc
cctgttttaaatatggaagaggaaacagagcttgcaatcgcttgcaggacattagacgct
gacaactttgactacacagagatggggatgactgacccgagcttcacaatgtgtacagac
ggagcagcaaaaggcctctgtgtctcgacatatgacgctgtggcaactactggactgaat
catttgaatatctccggagcagaaagaaatgcctcacctgctcaagcctgtgcagcaaca
gtcacaaacatcacagacaggctgcagggcattctggatgcctgccgggtagctgacagt
acaacagaagtggacctgctctgcttgatggaaggcgcacaatgtggcacggatgtggga
tttacagaagatattgcacatttgttttctccatgtgcaccaacagatactcaaactgac
gcacaagatgactctttttactccagcgtggatcagaacatgacattagacaatgtagaa
aatgtttgcagggccgaggagagggtggactcacagtggggtgccaagatgcaggacatc
agtcaggacccgtttctctgtttgggagatctaccagatgatttatcggaattcctgaat
gatgattaccttgggaagtttgtggacacaggagcgctctttgacgatccctgtctcaac
tgtgaggaagaactcaccacctgctgtgatcttcccccgccaatggagctgcccggcttt
gacagccttcagcagatacaggaggacaaagttacaagcacaacaaacaccaggagaaaa
agatccagaggtcgaccaaaaaccgaagagccacaggctgagctgactgtcactcaagac
actgacacagggtcagagctgagttcaccagagacggcggcccccccatccactccccca
agaatccttcatctccatccctccattcagttcatcaccatcccagacaatccgggatat
caggttgttcagacactgagtctctctcctccagttattacacttccactccccaacaca
gctgctgcacctacttacattttagttcctgctgcttcaccacccttcaaacgtcaagtc
ccacccctctccccgattgacggtgcagttgcgccagtccagatgagttcatccccatta
ggatctctgtcggaaaccgctagcacagccatgtctcccacttgtgcctcaccccagtct
cctagcactgagatgtctgcatgtaaggagtcaccccttcctcagtctcccactgtcatt
gacattccacaagttgtaaaggactacatccaggaagccaaagcccatatgagtcaaacc
tgccaggatatggaggcaggccttagcctgacctctcattacgtggatgtgccagtgagc
cagagagagactcgctctggaaaaagcacaaacaaaaccctggataaggagcttatcatc
atgggagacacggatcggcaaaagaccttgttggggccgagtcagatcttcgaaggctca
aatgtagacaaacccaaacgctacatagtgctactcggcaatgctggtatgggaaaaacc
accctgatcaggaagctgtgtctcgactggtccagggaccgcatcccacagtttgacttt
gtcttcttattagatggaaaatcactctctttaacagaggcgacctttagccttaagacc
ctcctcctaaacctctcctcctttgctccttcctgcatggaccccgaggcagtgtacgct
cagatcctcgcagcccctaagcgcgtgctgatcatttttgatgggtttggcgagttgcgg
gactttgaaactcttctccagactcaggaaaaagacattgtagcatcattgcagaaagac
agtaaagcacagaacttcacagtaagacatttatactctggcatccttcagaggatgctc
cttccaggctgcactcttctgctctcgacacgaccaaaaggcactgccacccagctactc
cggcggacagacagcattttggaggtgtgtggcttcaatcccacagacgtagagacatat
ttgtctcagtacttcactgatcctgacctcagagcatctgctttggactccttaaaagac
tgcagctatctccacctcctctgctggaaccctggactgtgtcggttagtctgcttggtt
ttagaacagtgcaaaagttcagaggacctcccgagaactttaactggactctgccatcaa
gtgcttcgtctgataatggaaatggacagaaagagcatgcactcacaggctgaatctcag
tcagaaacatctatgcaaacagaagaagaagcccagacagaaatctcaagtagttctcaa
gcaaaaacgcagcacaaaaacactcggagaaagtccagagcacaagttcgccctggctcg
cacacccaacgagcaaggaggacaaaaaaacaggacaaagaggaagatgatggcgatggg
gaggggatgaggagtgctggagaggaagcagacagaacagaggagaaagagttgctgtcc
cagctgagttctttggcctgggagtcagtcaaagcaaacacctgcaccctccccacagga
cgaaccatatcagccaaactcaaggcatttggccacaggacaggacttttcttctcttgc
cacctgagggcggggcaggttgtcccaagtggtgagacagagggagggggaagagaggat
agtgaagaaatgggaactggaaagaatggaaaaaaggggacagtcactgaacatgctgac
actagtgatgaccacatcctgttgtgggccaatccttttcttcagagttacctggcaggg
gtccatttgtctctatcaaggactataacagaccgtgcctttcatccaaccctccctttc
cagtcaggccagaaggggcgtcggagaccccaaagggaggagcttgaactcactcagcga
tttgcagtcggactcctgttccacgacagaacagagctgcagaggcttcactcacacaca
gagaaaaccttcagagatatggttgctgccaagcaggctttagtaacaaaacaccttgag
ggtctttcctacagtgacctgagccccgcccaggtcctggaggcgtgtcactatgtgtat
gaggcaaactccacgcatggtgatggtaacagagacagtggcagcacacaattagttgcc
cacctggcagcaaatcttccggaagttctaacatttcgtggagttccacttaagccgtcg
gacgtgttcactgtgcagcatgttctcgaaaagggtggaactgaaggtagaaggttctgt
ttggatctggaggattcggggatacagatttctggactcagagctctcattgggctcaac
aacatcaacacatacagggcatgcattgctgatgtcatcaccttatgggagcagttagag
cagagtggtgaagaaggtctcctacaggggacggtgtccaaattcaagatccaccctctg
aaagccacacaggtgtgtcacatagagcacctggcaaagctggtgaacatacatgtgcac
aagaggctgtcagacagttccagccaatcagattcaatcctggcagagggaataccagcc
gtcaaagagctacgcaagctggagtttgaccttggtccagagaaaggtccacttgctctt
ctcaagctgtgggggctcctgcctggtctacaaaacctccagcacttagatctggaaaac
agtaagataggtgacaaaggagcagagaaactggccgatgctttagtctcactctcttcc
ctggagatactcaatgtgtcacagaactgtatcggagatcaggggatgaagagactggca
accacactgagggatctgcccaaactgcactgtttaagtctctacagtaacgtgatttct
gatgaaggggcagagagtttagcagctgtcctcccacacatggcttcgctcactgacctg
gatgtgaagtacaacaagctaacagacgttggcgcacaaagcttggcagccagtctgaga
aactgcaagaaaatgaaaacactgaggatgtggaaccagtgtattccatacggagtgttt
gagaggcttcaacaccaggacaaccggatccagtcctggcagtag
DBGET
integrated database retrieval system
