Epinephelus fuscoguttatus (brown-marbled grouper): 125879708
Help
Entry
125879708 CDS
T08419
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125879708 (cacna1ia)
04020 Calcium signaling pathway
125879708 (cacna1ia)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125879708 (cacna1ia)
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125879708 (cacna1ia)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
125879708
NCBI-ProteinID:
XP_049417672
LinkDB
All DBs
Position
LG19:complement(27767605..27905914)
Genome browser
AA seq
2277 aa
AA seq
DB search
MVILLNCVTLGMYQPCENIDCTSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCYL
GDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYLEENFTLSAGMTLPAPYYQPEEDDER
PFICSLASDNGIMSCTDVPARREGGRTCCLDREDALHRQALGLSPEPLANSSAGEAMGLC
INWNQYYTRCHTGSTNPHKGAINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFI
YFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASMAEPGDCYE
EIFQLVCHVLRKAKRRSAALYYTLRGMPPPAGGGRGNRRGGGNVNGERHHSRHPKISHCP
HQNKQDNSSQPLANSISLTVPQSPEECPICALSLKEGARAVGDSNANGEEDEEDAVKETG
KEENHLEERGDGEKQRKRTCFGHCKDFWNDMRRKLWGIVESKYFSRGIMIAILINTISMG
IEHHNQPEELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYNIFDGIIVIISVCE
IIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSI
LGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTTPCA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDRSSCNFEENDKQKDSLHLS
DPKICTLTPNGHLDLSPLPHGLFPGERLTFALGSRKNSVISLGRANLEQKAMYPGRGYHN
WGRPLTNQPQALWARRSSWNSLGGCRPCSSSSPSASPAFTPTSARPFYGYGLGGLGGVVG
GSLRIRGPRASSSPHHHLQHVHPDEEESLLSPPPVAPHSLHLPHPVLPGHFAPRRDRRAL
SLELPHLLQVPGLTHPPPPPHHLPLPVTLHAHNRKKSLSGGAVITGGGGSGLDSLGGLGV
VHQDCNGKTPLSQLLQPPPRHHTEQAGEANPQSQLMADVFPQVNTRSKDREDLDDDVEYS
LCFRIQKMLEAYRPDWCESREDWSVFLFSPQNRFRQICQSIIAHKLFDYVVLAFIFSNCI
TVALERPKILQGSLERVFLTISNYIFTAIFVGEMTLKVVSMGLYVGEQAYLRSSWNILDG
FLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIG
NIVLICCAFFIIFGILGVQLFKGKFFYCFGPDVKNITNKSDCLQANYKWVHHKYNFDNLG
QALMSLFVLASKDGWVNIMYHGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFV
GVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYFASYGNVRLMIHTLCTNH
YLDLIITFIICINVITMSLEHYNQPHSLDLALKYCNYFFTSMFVLESVLKLIAFGFRRFF
KDRWNQLDLAIVLLSVMGITLEEIEISAALPINPTIIRIMRVLRIARVLKLLKMATGMRA
LLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMSRHATFENFGMA
FLTLFQVSTGDNWNGIMKDTLRECPPDNGVEADYACNPSLQFISPMYFVSFVLTAQFVLI
NVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGAPGCGGGRVDKGLVTAGPG
GTAGGKDRGCPSGERGEGVRRMRQSAGSAHPGGYNSRDSSRTLYSPAQESQWLDSVSLLI
KDTLEGEMLMIDNLSGSVFHHYSSPPPICKDCKGHPQEIRMAEIEQASLKSEQLSDKSSS
PALPDDLSLDEHTAYQLLAREGKGRCSSDSRSSEEAGGGGSHAGGRQTQTVVQSQVQGLG
QPCRALSSGIEVETALQEMEMQTYQTHMCTPHCSPGGVSSSSNKERNQEGGGGASGMSSP
FHLSAEFFHPAGAAIPAPPRSRSLRLSRGLRLTSPASWASLRSPGAHSKMLCTQYPSHSD
SSLATGSSEGSLQTTLEEGLSFSISPPQNLELPLPTAPLPLVCPIPLPEDGTAISSPVQT
LKPRPSPSSALTLQATRGHQRSQSSGRGSTSPGYTRDDSIDPSDEDLGIGIGSSIGGCGS
SQAGNSEHLSETLSSLSLTSLLSPSSLVYPGAAVKKCNSTGSLDQGGMMLSSRGREGRRE
ILGLELMDPQGFLANPWTGVLVDTRRGEGRGEIGDGEQGLKGKSSSQTTVGPCRKNR
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcctgctcaactgtgtgacactgggcatgtaccagccctgtgagaacatcgac
tgcacctcggaccgctgccagatactgcaggctttcgatgcatttatctacatcttcttt
gcattggagatggtggtaaagatggtggctcttgggatctttggccgacgctgttacctg
ggagacacctggaacagattggacttcttcatcgtcatggctgggatggtagagtactct
ctggacctgcagaacatcaacctgtcggccattcggacagtgcgggtccttcggcccctt
aaagcgatcaacagagtgccaagtatgcgtatcctggtgaacctgctgctagacactttg
ccaatgcttggcaacgtgctgctgctctgcttcttcgtcttcttcatctttggcatcatc
ggcgtgcagctgtgggcggggctactgaggaaccgctgctacctggaggagaacttcacc
ctctctgcaggtatgaccctgccggctccgtactaccagccggaggaggatgacgaacgc
cccttcatttgctccctggcatctgataatggcatcatgtcatgtaccgatgtcccggcg
aggcgcgaaggaggacgcacatgctgcctggacagggaggacgcactccacaggcaggct
ctgggcttgagtcccgagccgctggccaacagtagtgctggtgaagcgatgggtctgtgc
atcaactggaaccagtattacactcggtgccacacaggaagtactaacccccacaaaggt
gccatcaactttgacaacatcgtctacgcctggattgttatttttcaggtgatcactctg
gagggctgggtggagatcatgtattatgtaatggatgcccactctttctacaacttcatc
tacttcatcttactcatcattatcggttcattcttcatgatcaacctgtgcctggtggtt
atcgccacccagttctcggagaccaaacagcgggaacaccagctgatgcaggagcaaagg
gcgcagtgcctgtcctcgtcaaccctggccagcatggccgagcccggggattgctacgag
gagatcttccagctggtctgccacgtcctccgcaaagctaagaggagatcggcagctctc
tactacacgctgaggggcatgcccccgccagctggtggaggcaggggtaacaggcgcggt
ggagggaatgtgaatggagagcggcaccattccagacacccgaaaatatcccactgcccg
caccagaacaagcaagacaacagctctcagcccttagccaactccataagtctgactgtc
cctcagagtccagaggagtgccctatatgtgcactgtcactgaaagagggggcaagggcc
gtgggagattccaacgccaacggggaggaagatgaggaagacgcggtaaaagagacgggc
aaggaggagaaccatttagaggagaggggagatggagagaagcagaggaagaggacatgc
tttggacattgtaaagacttttggaatgatatgaggaggaaactttggggcattgtggag
agcaagtacttcagcaggggcattatgatcgctattctcatcaacaccatcagcatgggc
atcgagcatcataaccagcctgaggagctgaccaatgtcctggagatctgcaacatcgtc
ttcaccagtatgttcacgctggagatgatcctgaagctgactgcttttggcttctttgag
tacctgaggaacccctataacatctttgatggcatcatcgtcatcatcagtgtgtgtgag
atcatcggccaggcagacggcggcctgtcagtgctcaggacgttcaggctgctgagggtc
attaagctggtgaggttcatgcctgcgctgaggcgacagctggtggtgctgatgaagact
atggacaacgtggccactttctgtatgctgcttatgctcttcatcttcatcttcagtatc
ctggggatgcatatctttggctgtaagttcagtctgaagaccgaggcaggagacacagtg
cccgacaggaagaactttgactccctgctctgggccatcgttactgtcttccagattctg
actcaggaggactggaacatggtgctgtacaatgggatggcatccaccacgccctgtgct
gctctctacttcgtagctcttatgacctttggaaactatgtgctcttcaatttattagtt
gccatccttgttgagggtttccaggctgagggcgatgcaaaccgctcttactccgacgat
gacaggtcttcctgtaattttgaggagaatgacaaacagaaagattctctgcatctctca
gacccaaagatctgcactctaactcctaatgggcacctggatctgtccccactgccccat
ggtctgtttccaggagagaggctgacctttgccctcggctccaggaagaacagtgttatt
tctcttggcagggccaacttggagcagaaggctatgtatccaggtcgaggttaccacaac
tggggccgcccactgaccaaccagcctcaggccttgtgggcccgccgctccagctggaac
agtctgggaggatgccgcccctgctcctcctcgtctccctccgctagtccagccttcacc
cctacctctgcacggcccttctatggctacggccttgggggtctcggcggagtggtcgga
ggaagcctccgcatccgtggtccccgtgcctcctcatccccgcaccaccacctccaacat
gtccacccagatgaggaagagtctctcctgtctcctccccctgttgctccacactctctt
caccttccccatcctgtgctcccgggtcactttgcacccaggagggaccgcagagctctc
tcactagagctgccccacctgctgcaggtcccaggactaacgcaccctccaccgccacca
caccacctgccactccccgtgacactccatgctcacaacaggaagaagagcctctctggg
ggggcggtaatcactggaggtggtggcagtggactggacagtctgggtggcttgggagtg
gtacaccaagactgtaatgggaagactcctctgtctcagcttctccagcctcctcctaga
caccacactgagcaggctggagaggcaaaccctcagagccagctgatggccgacgtcttc
ccacaggttaacacacgcagcaaggaccgggaggacctggacgatgatgttgaatatagc
ttgtgcttccgcatccagaagatgttagaggcgtacagaccagactggtgtgagagcaga
gaagattggtctgtcttcctattctccccgcagaacaggttcagacagatatgccagtcc
atcatagcccataagctgttcgactatgtggttttggccttcatcttctccaactgcatt
acagtagctctggagaggccaaagatcctccagggcagcttggaacgagtctttctcacc
atctccaactacatctttactgccatctttgtgggcgagatgacactcaaggtggtttcc
atgggtctgtatgtgggcgagcaggcttatctgcggagcagctggaacattctggatggc
ttcctagtttttgtgtctttgattgacattgtcgtgtccatggcgggtggggctaagatc
ctgggtgtgctaagagtgctcaggcttctcagaacattgcgtcccctcagggtgattagc
agagctccaggtctgaagctggtggtggagaccctcatcacctcccttaaacccattggc
aacattgtcctcatctgttgtgcattcttcatcatctttggcattcttggggtgcagctg
tttaaaggcaagttcttctactgcttcggccccgacgtcaaaaacatcaccaacaagtct
gactgtctgcaagccaactacaagtgggtccaccataagtacaacttcgacaacctaggg
caggctctgatgtccctgtttgtcctcgcctctaaagacggctgggtcaacatcatgtat
cacggcctggatgctgtggccgtggaccaacagccggtgaccaacaacaacccatggatg
ctgctgtacttcatctccttcctccttattgttagcttcttcgtcctcaacatgtttgtt
ggcgtggtggtggagaatttccacaagtgccgccagcaccaggaggtggaggaggccaag
aggcgggaggagaagcgtcagcggcgcatggaaaagaagaggagaaaagcccagaagctg
ccctactttgccagctatggcaacgtccgcctgatgatccacacactatgcacaaaccac
tacctggacctcatcatcaccttcatcatctgtatcaacgtcatcactatgtcattagag
cactacaatcaacctcattctctggatctcgccctgaagtactgcaactatttcttcacc
tccatgtttgtgctggaatcagtactcaaactcatcgccttcggctttcgccgcttcttc
aaagacaggtggaaccagctggacctcgccattgtgcttctgtcagtgatgggcatcacc
ctggaggagattgagatcagcgctgccctgcccatcaaccccactatcatcaggatcatg
agagtactgaggatagcacgagtgctgaagctgctgaagatggcgacaggaatgagagcc
ctgttggatacggtggtccaagccctgcctcaggtgggtaacctgggcctgctctttatg
ctgctgtttttcatctacgccgccttaggagtagagctatttggagaacttgtttgcaat
gaagactacccttgtgagggaatgagtcgtcacgctacctttgaaaactttggcatggcc
ttccttaccttgttccaagtctccacgggcgacaactggaatggcatcatgaaggacaca
ttgcgggagtgcccaccagacaatggcgtcgaagcggactatgcctgcaatcccagcctt
cagtttatctcgcccatgtactttgtctccttcgtgctcaccgcccagttcgtgctcatc
aatgtggtggtggccgtgctgatgaagcacctggacgactccaacaaggaggcccaagag
gaggcggagatggatgcagaaattgagctggagctggcccagggcaccctctgttgcatg
ggcgcccccggctgcgggggtgggagggtggacaaaggactagtcactgctggacctgga
ggaacagcagggggaaaggacagaggatgtccgagcggagagaggggagaaggagtgagg
aggatgcgacagtcagcaggcagtgcacacccaggagggtacaactcccgtgactccagc
cggacactgtactcaccagcacaagagagccaatggctggacagcgtttctctcctcatc
aaggatacactggagggggagatgctgatgatcgacaacctctccggttctgtcttccac
cactattcctctcctccacccatctgcaaagattgcaagggccacccacaagagatcagg
atggcagagattgagcaggcatcactgaagtcagagcaactgtcagacaagtcctcatcc
cctgccctgccagatgacctcagcctggatgaacatactgcctaccagctgctagcgcga
gaaggcaagggaaggtgcagcagtgattcccgcagctctgaggaggctggaggcggaggg
agtcacgcgggaggccggcagactcagaccgtggtgcagagccaggtgcaggggttgggc
cagccctgcagagccctcagctctggcatcgaggtggagactgcactacaggagatggag
atgcaaacgtaccagacacatatgtgcacacctcactgtagcccgggtggcgtttccagc
agcagcaacaaggaaagaaaccaagaaggaggaggaggagccagcggcatgtcttctcct
ttccatctgtctgcagagttcttccaccctgcaggagcagccatcccagcacctccccgc
agtaggagcctacgattgtcgaggggccttaggctgacctccccagcatcatgggcttca
ctacgctccccgggagcccacagcaagatgctctgtacacagtacccgtcccacagtgat
tcatccctagctacaggcagctctgagggcagcctccagaccaccctggaagaaggactg
agcttcagcatctctccgccacagaacttggaactgcctttgccgacagctcccttacct
ttggtttgcccgattccgctgcccgaagacggcactgccatttcctccccagtccagacc
ctgaaaccgaggccgagcccctcatcagccctcaccctccaggccaccaggggccaccag
cggagccaaagcagcggccgaggtagcaccagcccgggttacacccgcgatgattcaatt
gacccttccgatgaggatctgggcataggtatcggatcgtcgattggtggttgtggctcc
agccaagcgggcaacagtgaacacttgtcagagacactgagcagcttgtcgctgacatca
ctgctatcgcccagctccctggtgtacccgggagcagcggtgaagaagtgcaacagcaca
ggcagcctggaccaaggggggatgatgctgtcatcacggggcagggagggccgcagggag
attctgggcttggagcttatggacccccaaggcttcttggccaacccttggacgggggta
ttagttgatacaagaagaggagaaggaagaggggaaataggagatggcgagcaagggttg
aaagggaagagctcaagccaaacaacagtagggccttgtcggaaaaacagatga
DBGET
integrated database retrieval system
