Epinephelus fuscoguttatus (brown-marbled grouper): 125879905
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Entry
125879905 CDS
T08419
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efo03041
]
125879905
Enzymes [BR:
efo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125879905
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125879905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125879905
NCBI-ProteinID:
XP_049418020
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Position
LG19:complement(33461512..33471198)
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AA seq
648 aa
AA seq
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MRGSYGDRDRDRGRDRGSPRFGSSRGGPPPGRKFGNPGDRLRKKRWDLDELPKFEKNFYN
EHLEVQRMSQYDVEEYCRKKEITVRGSGCPKPITNFHQAQFPQYVMDVLMQQNFKEPTAI
QAQGFPLALSGRDLVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDTGRG
GGGGGGRPRFRGNSNSNNPNLMYQDECDRRMRSVGGGGSSKDSRGSSSYGRDSRDSRGGS
SRDGDRSSSSSSSSYRDRSSRDGGRSYGSSSNSYDQYQNNNSSSSQYSSSRGSSGSGGGG
VGQAPPSSSGPQPLMAQQFNPPQPMMGLMGHSPFQFAPPPPPPSAGRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcatacggagacagagatcgagaccgtggccgtgacagaggaagccctcgt
ttcgggtccagcagaggcggccccccaccgggtagaaagtttggaaaccccggggatcgt
ttacgaaagaagagatgggatctggatgagcttcccaagtttgagaagaacttttataat
gaacacctggaagtgcagcgaatgagccagtatgatgttgaggagtattgcaggaagaaa
gaaatcactgttcgaggttcaggctgcccaaagcctatcaccaacttccaccaggcacag
tttccccaatatgtaatggacgtcctgatgcagcagaatttcaaggagcccacagccatc
caggctcaaggtttccctctggccctgagtgggagagaccttgtgggcattgctcagact
ggctctgggaagaccttatcgtacctcctgcctgccattgtgcatatcaatcatcagccc
tacttggagcgtggagatggacccatttgcttggttctggcccccacaagagaactggcg
cagcaggtccagcaggtggcatacgactacggaaaatcctctcgcatcaaaagcacttgt
gtgtatggaggtgctcccaagggacctcagatcagagacttggagagaggtgttgagatc
tgcatcgctactccgggccgtctgattgatttccttgaggctggaaagaccaacctgcga
cgctgcacatacttggttctggatgaagctgaccgcatgctggacatgggttttgagcca
cagattcgcaagattgtggaccaaatcaggcccgacagacagaccctgatgtggagcgcc
acctggccgaaagaggttcgccagctggccgaggactttttaaaagactatgtccaaatc
aatgtcggagcactggaactcagcgccaaccacaacatccttcagatagttgatgtctgt
atggagagtgaaaaggaccacaagttgatccaactgatggaggaaatcatggctgagaag
gagaacaagaccattatctttgtggagaccaagaaacgatgtgacgatctcacacgcaga
atgagacgtgatgggtggccagcgatgtgcattcatggtgacaagagccaaccagagaga
gactgggtgttaacggagttccgtagcggcaaagctcccatcctcatcgctactgacgtg
gcctcacgtggtctggatgtggaggatgtcaagtttgtcatcaattatgactatcccaac
tcatcggaggactacatccatcgcatcggccgcacggcccgcagcaccaacaaaggcaca
gcttacaccttcttcactccggggaacctccgccaggcccgcgagctgatccgggtgctg
gaggaggcccgacaggccatcaatcccaaactgctgcagctggttgacactggacgtgga
ggagggggaggaggtggccgtccccgtttccgtggcaactccaattctaacaaccccaac
ctcatgtaccaggacgagtgtgacaggcggatgcgctctgtgggtgggggtggcagctcc
aaggacagccgcggcagcagcagctatggccgcgacagccgagacagccgcggaggaagc
agccgggatggggaccgctcctcctcctcgtcctcctcatcttacagagatcgcagcagc
agggatggaggacgcagctacggctccagctccaactcatacgaccagtaccagaataac
aacagcagcagcagccagtacagcagctccaggggcagctctgggtcggggggtggagga
gtggggcaggccccgccttcttcatcgggtcctcagcctttaatggctcagcagttcaac
ccaccccagcccatgatgggcctgatggggcactcgccgttccagtttgctcctccaccg
ccaccgccttcagcaggcagaaagtga
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