Epinephelus fuscoguttatus (brown-marbled grouper): 125880329
Help
Entry
125880329 CDS
T08419
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125880329 (irx5a)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125880329 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
125880329
NCBI-ProteinID:
XP_049418623
LinkDB
All DBs
Position
LG2:16129870..16133916
Genome browser
AA seq
457 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAYR
KNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLLNPGDIGCDRFKEEN
HGKDTDPLLSDSELKDQEERTTELLPDSAKPTTSSPSAVPRGNQTVAQQDKPSDLSHAPG
TVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKGSGEAPQACPGLGQSAVMGTNASPS
RSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQTV
LNRAEALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttctctagccctgtattcatgc
cctgcgtacagcaccagcgtgatatcgggacccagaaccgaggaacttgggagatcctct
tcgggatctgcttttgcgccctatgccggatctaccgcgttcaccagcgcctcgccaggc
tacaactcccacttaccatacagtgcagacgcggcagcagctgccacattcacctcgtac
gtggtgagtaaactaaagagttctccctatgaccacaccacgggtatggccggctcaata
ggataccacccttacgcagcacccttgggcacctacccttatggtgacccagcataccgt
aaaaacgcaactcgggacgccactgccaccctgaaggcctggctcaacgaacaccgcaaa
aatccctacccgaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctc
acccaggtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatg
acctggaccccccggaaccggagcgaggacgaggaggaggacgagaatattgatttggag
aaaaacgacgacgacgagccaaacaagcccacagacaagggagactccacagacacagaa
gcagatcataaactgctgaacccaggggacataggctgtgacagatttaaagaggagaac
catggcaaagacacggatccccttctgagcgactcggagttaaaagaccaggaggagcgg
actacagagttgctgccggattccgcaaaaccaaccacttcgtctccctcggcggtgccc
cgggggaaccagaccgttgcgcaacaagacaagccgtcagatttgagccatgcaccgggt
acggtgaccagcaacgtgacctctgttatccactcgcccccttcggcccctaaacccaaa
ctctggtcccttgcggagatcgccacgtcctcagacaggtgtaagggcagcggcgaggcg
ccacaggcttgccccggtttgggtcagagcgcagtaatgggcaccaacgcatctccatca
cggtcctccccacagtgcccgctccccaacagcacggtcctatccaggcctctgtactac
acctcccctttctaccccggctacacgaactatggtggcagttttggacatcttcacagt
aaccacggctcggtaaccacgggctccacggcacatttcaatggattaaaccagactgtg
ttaaatagagcagaggctttggtaagggagagccagaaagtcagaggccaaacgcaggta
gatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
DBGET
integrated database retrieval system
