Epinephelus fuscoguttatus (brown-marbled grouper): 125880353
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Entry
125880353 CDS
T08419
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125880353 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125880353 (smarcd2)
03036 Chromosome and associated proteins [BR:
efo03036
]
125880353 (smarcd2)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125880353 (smarcd2)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125880353 (smarcd2)
PBAF complex
125880353 (smarcd2)
GBAF(ncBAF) complex
125880353 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125880353
NCBI-ProteinID:
XP_049418659
LinkDB
All DBs
Position
LG20:19459724..19473665
Genome browser
AA seq
500 aa
AA seq
DB search
MASRGGFTPMNMNVSPMNVGHAAGMRMPGMPQAPAGYSRSMTTAPQYPQRPGMPSNRVGG
PMGSMGGQLPGPSYGGGNMSMRQGMGPPSMDASRKRFLHMHQQQQQEALGGLRRGAKRRK
MADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYIS
NTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPDNHL
VEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASI
MQALWLYIKNNKLQDCHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPIIINH
MISVDPTDQKKTACYDIDVEVDDPLKGQMTSFLSSTTNQQEIAALEMKIHETIEYINQLK
TERDFMLSFSNNPQDFIQDWLKSQCRDLKLMTDVTGNPEEERRSEFYQAPWVPEAVGRYV
YSKVQQRRQELEQVLGIRLT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagaggaggattcacaccgatgaatatgaatgtgagccccatgaatgttggg
cacgctgcgggcatgaggatgccaggtatgccgcaggctccggcgggatactcccggagc
atgaccaccgctccccagtacccccagcgcccagggatgccgtccaacagagtgggaggc
cccatgggatcaatggggggtcagctgcctggtccttcttacggtggtgggaacatgtcc
atgcggcaaggcatggggcctccgagcatggacgcctcgaggaaacggttccttcatatg
catcagcagcagcagcaagaggcactgggaggcctaagacgaggggcaaagagacgcaag
atggcggacaaggttcttcctcagcggatccgagacctggtcccagagtcccaggcctac
atggatctcttggcatttgaaaggaaactggatcagaccatcgcccgaaagcgtatggag
attcaagaagccatcaagaaacctattatgcaaaaacgcaagctcaggatctacatttcg
aacacatacactcccagcaagccggagggcgaggaggccgagaaggtgtcctcctgggaa
ctgagagtggagggaaaacttctggaggaacctggcaagcagaagaggaagttctcgtct
ttcttcaaaagcctggtgattgagctcgataaggagctctatggacctgacaaccactta
gtagagtggcacagaatgcccaccactcaggagaccgacggtttccaggtcaaaaggcct
ggcgacgtgaatgttaaatgcaccctcctgctcatgcttgaccaccagccccctcagtac
aaactggacccgcggttggctcgcctgctgggtgtgcacactcagacgcgggccagcatc
atgcaagctctctggctctacatcaagaacaacaagctgcaggactgtcatgagaaggag
tacatcaactgcaaccgctacttcagacagatctttggctgtcctcgcatgaggttctca
gagattcccatgaaactggccggcctgctgcagcaccctgaccccatcatcatcaatcac
atgattagtgtggaccccacagatcagaagaagacagcgtgctatgacattgatgtggag
gtggatgacccactgaagggccaaatgaccagtttcctgtcctctacaaccaaccagcag
gaaattgctgcactggagatgaagatccatgagacgattgagtacatcaaccagctgaag
actgagagggacttcatgctgagcttcagtaacaatccacaggacttcatccaggactgg
ctcaagtctcagtgcagagatctgaagttgatgacagacgtgacaggaaacccagaggag
gagaggaggtctgagttctaccaggcgccctgggtaccagaggcagtgggcagatacgta
tactccaaagtgcagcagaggaggcaggagctggagcaggtgttgggcatccgactcacc
taa
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integrated database retrieval system
