Epinephelus fuscoguttatus (brown-marbled grouper): 125880530
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Entry
125880530 CDS
T08419
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04020
Calcium signaling pathway
efo04080
Neuroactive ligand-receptor interaction
efo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125880530
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125880530
04082 Neuroactive ligand signaling
125880530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125880530
Ion channels [BR:
efo04040
]
Ligand-gated channels
Glutamate (ionotropic)
125880530
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
125880530
NCBI-ProteinID:
XP_049419047
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All DBs
Position
LG20:28726593..28823800
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AA seq
1391 aa
AA seq
DB search
MAIPRGHLPPSPWPPLFLLLLFLLLLISSPLPLQARPLLLHPSINVAVVFSGSSYQNEVR
GRLSGENFVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMATEKLHGVVFEDDVGSGADAQV
AEVAQILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQIVCMFKLMEEYD
WGEFAVITSLLPGYDTFVDIVQSYTDTSYFLWNLQDILSLEMSVGANDVKTKRMLQQVDS
RVLLAYCSYEEAQYLFSQAAEVGLLGPGYIWILPSQAVGNPDSPPPVSFPVGVIGVITEQ
WRKSLRQRVREGVAIVAKGAESFKKQYGFIPEGHGDCTKLAKHSDNNTLFRHMLNVTWER
RDLSFNSQGFLSNPALVIIALDRERLWDKVGTYARGIIQVRYPVWPRYGSFLEQVSDDRH
LTVATLEEHPFVMVENVDPGTGTCVRNTVPCRRQSNLTDSIIGHSESYTKLCCKGFCIDI
LKKLSRTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSEIID
FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVG
YNRSLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLA
SYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHT
HMMKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGI
ALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYM
LLVAMGLSLLVFAWEHLLYWKLRHSLRKSHKLDFLLAISRGIYSCFNGVEDPGRSSGLAK
PDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIEHLSRHGGSLPVRIPQVATEA
VPGGFAYITENHCSLTPPLTAVTSLKQQRGVTRPTPLRYTLPTRSTSCLYDRPLPVSSLS
SPHLAVGEPLPHQHPHHYQTTGRLYVDTHPHSPFIPYTDLQLPDIYASHPLSSPQNQHLQ
AGFSRRKRRSKSFQCEDGDVGRTQREQEKNDTSPVYMSELKANHLQDNHISAPSVDNIYT
GEGMCPRVENYSSWPPEDLVLRGRRRHRRPSFLKATWGSEQMRQLDESQSSLSSQSPSTL
PDLFPCILTPTTPAKPHNPAHLRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSHSTHL
PTYGEAVRHGAGLGRGMVRRATSLLSRQYAHYLNSYPGLPLYHGPLDLQHHSQASSGHPS
PVCQLLACGGGRCGGQRALLYQDSVYGAYGVYQGSQTGSEALGGQGAGGQPVGSPCVLRP
WRRVSSLESEV
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccaggggacatcttcctccctctccttggcctcctctcttcctcctcctc
ctcttcctcctcctcctcatctcctccccgctccccctgcaggcccggccgctcctcctc
cacccgtccatcaacgtggcggtggtgttcagtggctccagctaccagaatgaggtcaga
ggtcgtctcagcggggaaaactttgtcgacctgcccgtggtggtcagcccggtgaccgtg
ctggtcaacgacaccaacccgcgcgacctgctgacacgcctctgcgacaccatggcaacg
gagaagcttcacggcgtggtgttcgaggatgatgtgggctctggtgccgacgctcaggtg
gcagaagtagcacagatcctggacttcctctccactcagacagctctaccaattgtgggc
atcagcggcggctctgcagttgtcataccgtacaaggctgaggggtcctccttcctgcag
atgggagcgtctctggagcagcagattgtctgcatgttcaagctcatggaggagtatgac
tggggcgagtttgcggtgatcaccagcctgctgccgggctacgacacctttgtggatata
gttcagtcctacacagatacctcctatttcctgtggaatctacaggatatcctgtctctg
gaaatgtctgttggggccaatgatgtgaaaaccaaacgcatgctgcagcaggtggactcc
cgagtcctgctggcgtattgctcctacgaggaggcgcagtacctgtttagtcaggcagct
gaggtgggtctgctggggccaggctacatctggatcctccccagtcaggccgtgggcaac
cccgacagccctccacctgtcagcttccccgtcggtgttattggtgtgatcacggagcag
tggaggaagagcttgcggcagagggtgagggagggcgtcgccatcgtagctaaaggggcc
gagagcttcaagaagcagtacgggtttattcctgagggacatggtgactgcaccaaactg
gctaaacactcagacaacaacactctgttcaggcacatgctgaatgtgacgtgggaaagg
agagatctgtcattcaacagccaaggcttcctctccaaccctgccttggtcatcattgct
ctggaccgagagagactctgggacaaggtgggtacgtacgctcgagggatcattcaggtt
cgctacccggtctggcctcgatacggcagcttcctggagcaggtttccgatgaccgtcac
ctgaccgtggccacgctggaggagcatcccttcgtcatggtggagaacgtggacccgggc
accggcacatgtgtccgcaacacggttccctgcaggcgccagtccaatctcacagatagt
attatcggccactctgagtcctacaccaaactgtgctgcaagggcttctgtatagacatc
ctgaagaaactgtcccgcactatcaagttctcctacgacctctacctggtcaccaacggg
aaacatggcaagctggtccgtgggacttggaacggcatgattggggaggtcgtgtacaga
cgagctgacatggccattggctctctcactatcaacgaggaacgctcggaaatcatcgac
ttctccgtgccgtttgttgagacaggcatcagcgtcatggtagcccgcagcaacgggacg
gtttccccatctgcctttcttgagccctacagcccagcagtttgggtcatgatgtttgtg
atgtgcctcactgtggtggcggtgacagtttttgtgtttgaatacttcagtccagtcggc
tacaaccgcagtctagtcagcgccaaagctcctggtggtccaacgttcaccatcgggaag
tcggtgtggctgctgtggggcattgtcttcaacaactcggtccccattgaaaaccccaaa
ggaacgaccagtaagatcatggttctggtctgggccttctttgctgtcatcttcctggcc
tcgtacactgccaacctggctgccttcatgattcaggagcaatatatcgacaccgtgtct
gggctctctgacaagaagttccagaaaccacaggagcattaccctcctttccgcttcggg
acggtcccaaacgggagcacggagaggaacatccgcagcaactaccccgacatgcacaca
cacatgatgaagtacaaccagaagggggtggaagaagctctagaaagcctcaaaaccgga
aagctggatgccttcatctacgatgctgctgttttgaactacatggcggggaaggatgag
ggctgcaagctggtgaccatcggcagcgggaaagtgtttgccaccacgggatacggcatc
gctctgcagaaggactcccgctggaaacggcctattgacctggcgctgctgcagttctta
ggagacggtgacacccagcgcttggagacggtgtggctgtcgggcatctgccagaacgag
aagaacgaagtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctacatg
ctgctggtggccatgggcctcagcttgctggtctttgcctgggaacacctgctttactgg
aaactacgacactccctccgcaagtctcacaaacttgacttcctgctggccatcagtagg
ggtatttacagttgtttcaacggcgtggaggatcctgggcgttcctctggtttggccaaa
cccgacctgacctccaactacgctcaagctaacatgctgaagatgcttcgcactgccaag
gacctggtctccactgccaatgttgagacctctctggacaacgccaccaagaccatagag
catttgagtcgtcatggcggcagtttgcctgttcgtatcccgcaagtcgccacggaggcc
gtaccgggaggatttgcttacattacggagaatcactgctcgctgaccccacctctgact
gctgttacttctctgaaacagcagaggggtgtaaccaggcccacgccactgcgctacacg
ctcccgacacgctccacttcatgtctgtatgacaggccacttcctgtgtccagcctcagc
agcccccacctggccgtgggcgaaccgctccctcatcagcacccacaccactaccagacg
actgggagactttacgtagacacccatcctcactcacccttcatcccctacactgacctc
caactacctgacatctacgcctctcacccgctctcctcgcctcaaaaccagcacctccaa
gcgggcttctcccgacggaaaaggaggtccaagagcttccagtgtgaggatggggacgta
gggagaacacagagggagcaggaaaagaatgacacaagtcccgtctatatgagcgagctc
aaagccaaccacctccaagacaaccacatctccgccccaagcgttgacaacatctacaca
ggggaggggatgtgtcctcgggtggagaactacagctcctggcccccagaggatctggtg
ctgagagggagacgcaggcaccgccgcccctctttccttaaagcgacatggggcagtgag
cagatgcgccagctcgacgaatcccagtcatccctgtccagccaatcaccttccaccctg
ccggacttgttcccatgcattcttacaccgaccacacccgcaaagccccacaaccccgcc
caccttcgaaacaacctgtgcctcccgcggaaccaggcctacctccacatacgggaggac
cagaggaggcccaatgggcgtaagggccagaggctgcgctactcccactccacccacctc
cccacgtacggagaagcagtgcgacacggagctgggttagggcgggggatggtacgcaga
gccaccagcttgctcagcagacagtacgcccactacctgaactcataccctggactaccc
ctctaccacggccccctggacctgcagcaccacagccaggcctccagcggccacccgagc
ccagtgtgccagctgctggcttgtggtggcgggagatgtggaggccagcgggctctgctg
taccaggacagtgtgtatggggcctatggggtctatcagggatcccagactggttcagag
gccctgggaggtcagggagcagggggccagcctgtggggagcccctgcgtactccgtccc
tggcgacgggtgtccagtctggagtctgaggtgtga
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