Epinephelus fuscoguttatus (brown-marbled grouper): 125880578
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Entry
125880578 CDS
T08419
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125880578 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125880578 (gspt1)
03012 Translation factors [BR:
efo03012
]
125880578 (gspt1)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125880578 (gspt1)
Translation factors [BR:
efo03012
]
Eukaryotic type
Release factors
125880578 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125880578
NCBI-ProteinID:
XP_049419120
LinkDB
All DBs
Position
LG20:13331682..13345971
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPTAAAELPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPASDGAPDPVASMEVAETAAPVENGGTDADMTTEEETWEQKEEPGGGGGGGGQEDLGSG
GACEEGAARNEDEEMMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
PECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLV
MMPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
actgccgcggcggagctccccaccgccttcgccgccctcaacgtcaacgccaagccgttt
gtccccaacgttaatgccccggtgtttgtaccgagcttccttcaagccagcgccgtggaa
atgccggcctcagacggtgcccctgacccagtggccagcatggaggtggcagaaacagct
gctccggtggagaatggaggcacagatgcagacatgaccacagaggaagagacgtgggag
cagaaggaggagccagggggaggaggaggaggcggaggacaggaggacctgggctcagga
ggagcctgtgaggagggcgctgcgaggaatgaggatgaggagatgatgatggaggaggaa
gaagaggagatgcccatgcctaaagtggctccagcaccaccagatgcccccaagaaagaa
catgtgaacgtggtctttatcggtcacgtggacgctggtaaatcaactattggaggacag
atcatgtacttaactggaatggtggacaagcgaaccctggaaaaatatgaaagagaagca
aaagaaaaaaatagggagacatggtacctgtcgtgggctctggacacaaaccaggaggag
agagacaagggaaagacggtggaggtcgggagggcttactttgaaactgagaaaaaacac
ttcaccatcctggacgcccccggacacaagagctttgttcccaacatgattggtggagct
tcacaagccgacctggcagtcctggtgatttcagcgaggaagggtgagtttgagaccggc
tttgagaagggtggacagacgcgggagcacgccatgctggctaaaacagcaggagtcaag
catctcattgtcctggtcaacaagatggatgaccccaccgtcaactggagcctagaaagg
tatgaagagtgtaaggagaagctggttccatttctaaagaaagtgggcttcaaccccaag
aaggacatccactttatgccttgctccggactcacaggtgccaacctcaaggaccccgtg
cccgagtgcccctggtacacgggtctgccatttattgcccatctggacagtttgccaaac
ttcaccagatccagcgatggaccagtcagactacctattgtcgacaagtacaaggacatg
ggcacagttatcctcgggaagctggagtctggatccatcagtaaagcccagcagttggtc
atgatgccgaacaggcacacagtggaggtattgagcttgctgagcgacgatgtggagaca
gacgatgcaagtcctggggagaacctgaagttgaggctgaagggcatcgaggaggaagaa
atccttcccggttttatcctctgtagccctgacaacctctgccactccggccgcaccttt
gacgcacagatcgtcatcattgagcacaaatcaatcatttgtcctggttacaatgcagtc
cttcacatccacacctgcattgaagaagtgcaaatctcagccttaatctgtctggtggac
aagaagacgggggagaaaagcaaaacacgaccacgctttgttaagcaggaccaggtgtgt
atcgccaggctccgggcagctggagtcatctgcttagagaccttcaaagacttccctcag
atgggacgattcacactgcgagatgaaggcaaaactatcgccatcggcaaagtgctgaag
ctggtgccagaaaaggactaa
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