Epinephelus fuscoguttatus (brown-marbled grouper): 125881019
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Entry
125881019 CDS
T08419
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efo03016
]
125881019 (trub1)
Enzymes [BR:
efo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
125881019 (trub1)
Transfer RNA biogenesis [BR:
efo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125881019 (trub1)
Prokaryotic type
125881019 (trub1)
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
125881019
NCBI-ProteinID:
XP_049419891
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Position
LG20:4261641..4270803
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AA seq
278 aa
AA seq
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MAGNISNTATPITSSLSKLQSLNGMFAIYKKQGPTSADVLNKLKEVLLKEAGVKNPNPRK
RKKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLAGSKKYIAVGQLGKATDTLDATG
SVTLEKDFGHITRLDIEEKLKAFTGDIMQVPPLYSALKKDGQRLSVLLMKGHKVEAKPAR
PVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLE
EHALHEEQWTLEHILRSLQPCSQSEQDGHCGEPPEADT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaacattagcaacactgcaactccgataactagctctctatctaaactacag
tctttaaatggaatgttcgcgatatataaaaaacaagggccgacatctgcagacgtgtta
aataaactcaaagaagttttactcaaagaggctggtgtaaaaaacccaaacccgcgaaag
aggaagaagcagagcctgaagatgggacacggagggacactggacagtgctgccagcggg
gtgttggttgttggtgttggaaatggcacaaagatgctcagtacaatgttggctggttct
aagaaatatattgctgtggggcaactgggaaaagcaacagatactctcgatgccactggc
agtgtgactctggagaaagactttggacacataaccaggttagacattgaggagaaactg
aaagctttcactggtgacatcatgcaagttcctccactctactctgcactaaagaaagat
ggccagcgtctatctgtcttgctgatgaaaggtcataaggttgaggccaaaccagctaga
ccagtcactgtgtacaacctgaccctgcaagagttcaaacctcctctcttcactctggat
atagagtgtggtggtggattttatgtcagaagcttggtggatgacctgggaaaagctctg
tcgtcttgtgctcatgtgaaggaactgacccgaaccaagcagggtcagttcaccctggag
gagcacgccttacatgaggagcagtggacactggaacacatcctgcgctctctgcagccc
tgctcacaatcagagcaggacggccactgcggagagccaccagaggctgacacctga
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