Epinephelus fuscoguttatus (brown-marbled grouper): 125881072
Help
Entry
125881072 CDS
T08419
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04145
Phagosome
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125881072
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125881072
09144 Cellular community - eukaryotes
04510 Focal adhesion
125881072
09142 Cell motility
04820 Cytoskeleton in muscle cells
125881072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125881072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125881072
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125881072
Membrane trafficking [BR:
efo04131
]
Endocytosis
Phagocytosis
Opsonins
125881072
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125881072
Exosomal proteins of colorectal cancer cells
125881072
Exosomal proteins of bladder cancer cells
125881072
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125881072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CCN
EGF
TSP1_ADAMTS
TSP1_CFP_C
HEPN_MAE_28990
Motif
Other DBs
NCBI-GeneID:
125881072
NCBI-ProteinID:
XP_049419976
LinkDB
All DBs
Position
LG20:complement(26669158..26695175)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSPQRGFPLLLIFLYASAVCAGVGGAKVNNVSSEVCRHPCEELVGLLTEIQGLRIVTSNL
LEDLDRVAKENEEMRIFLAELSNSSSSSSSWSNSSNWSSNWRGSNWRSSNWRSSNWSSSS
GHGDGNDGNSDDINSRGSNWRSSNSSSSSSSSSGHGDGNDGNSDDINWRGSNWRGSNWRS
SNWRSSHWSSNSSSSSSSSGHGDGNDGNSDDINWRSSNWRSRHWSSNSSSSSSSSGHGDG
SDGNSDDINDLDRGRDEEVWCMQDGRVYEHGEDWDVDSCTSCVCKDGKVVCHQVSCPPVS
CIYPSFIDDKCCPVCLNNEDGWSPWSEWTHCSVTCGRGGQQRGRSCNGIMPSCAGPSVQT
RSCMLMKCDRKVRAEGNWGLWSPWSACTTTCGEGDITRVRLCNNPPPQKGGRGCTGSARE
TQPCNNTLCPVAGGWTSWTEWSLCSESCGGGLTSRQRECLNPAPQHGGKPCAGDAVDYEA
CNKQPCPIDICLLSNPCFPGVECTSYSDGSWYCGRCPLGLKGNGTHCEDENECEVESVCV
TECVNTDPGFYCLPCPPRYKGTQPFGLGLQEALETRQVCEPYNPCKDNTHTCHKYAECIY
LGLASEVLFKCVCAIGFAGDGFLCGEDSDLDGWPNYRLPCKQNATYHCHRDNCPMIPNSG
QEDLDKDGQGDACDPDDDNDDIIDERDNCPLVYNPRQFDSDRDGVGDRCDNCPFDSNPLQ
TDTDDDGEGDACSIDIDGDEILNDHDNCPLVYNTDQRDTDLDGVGDQCDNCPLLHNPLQL
DSDSDLVGDMCDNNEDIDEDGHQNSLDNCPYIANSNQADHDNDGRGDACDHDDDNDGIPD
DRDNCRLVPNRDQRDSDGDGSGDACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLL
DPKGTTQSDPLWVIRSQGTELLQTANSDPGIALGYDKFSAVDFSVTFYVNTNRDDDYAGI
VFAYQSSRRFYVVMWKQVSQAYWEKKPSKAFGTAGVSIKLVNSATGPGEYLRNALWHTGN
TRHQVRTLWHDPNKIGWKDYTAYRMHLIHRPKTGFIRVVVYEGREILSDSGAVYDHTLAG
GRLGLFVFSQEHVLFSDLRYECRGKISCLNICPDF
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgcagagaggtttccccttgcttttgatattcctctatgcatcagctgtgtgc
gcaggtgtgggcggtgcaaaggtcaacaatgtgtcgtcagaggtctgtcgtcatccgtgt
gaagagctggtgggcttgctgacagagatccaaggcttgcgtattgtgaccagcaacctg
ttggaagacctggatagagtagcaaaagaaaatgaagagatgcggatatttctggctgag
ctgagcaacagcagcagcagcagcagcagctggagcaacagcagcaactggagcagcaac
tggcgtggcagcaactggcgaagcagcaactggcggagcagcaactggagcagcagcagt
ggccatggcgatggcaatgatggcaacagcgatgatatcaactcgcgcggcagcaactgg
cgcagcagcaacagcagcagcagcagcagtagcagcagtggccatggcgatggcaatgat
ggcaacagtgatgatatcaactggcgtggcagcaactggcgtggcagcaactggcgcagc
agcaactggcgcagcagccactggagcagcaacagcagcagcagcagtagcagcagtggc
catggtgatggcaatgatggcaacagtgatgatatcaactggcgcagcagcaactggcgc
agcagacactggagcagcaacagcagcagcagcagtagtagcagtggccatggcgacggc
agtgatggcaacagcgatgatatcaatgatcttgacagaggcagagacgaagaggtgtgg
tgtatgcaggacggacgagtgtatgagcacggggaggattgggatgttgacagctgcacc
tcctgtgtttgcaaggatggaaaggtggtgtgtcatcaggtgtcttgccctcctgtatcc
tgcatctatccatcctttatcgacgataagtgctgtcctgtgtgtctcaataatgaggat
ggctggtccccttggtctgagtggacccactgctctgtcacctgtggacgtggagggcag
cagaggggacgatcctgcaatggcatcatgccgtcctgtgctggcccgtcagtccagacc
cgcagctgcatgctgatgaaatgtgaccgcaaggtgcgtgctgaagggaactggggcctt
tggtctccctggtccgcgtgtacaaccacatgtggagaaggcgacatcacacgggtccgt
ctctgtaacaaccctccaccacagaaggggggcagagggtgcacaggcagcgccagggag
acacaaccttgcaacaatacactctgccccgttgctggaggctggacgagctggactgaa
tggtcactgtgctcggagtcgtgcggtggaggtcttacgagtcgtcagcgggagtgtttg
aaccctgcccctcagcacggtgggaagccttgtgctggagacgctgtggactatgaagca
tgtaacaaacagccatgtcctatagacatatgtttgctttcaaatccatgttttcctgga
gtggagtgcacgtcgtatagcgatggatcatggtattgtggacgttgtccgttgggttta
aaaggcaatggcactcactgtgaagatgaaaatgagtgtgaagtggagagtgtttgtgtc
acagagtgtgtaaacacagaccctggcttctactgtctgccctgtcctcctcgctataaa
ggcactcagccgtttggccttggactgcaggaagccctggaaaccagacaggtgtgtgag
ccttacaatccttgcaaagacaacacacacacctgccacaagtatgccgagtgtatctac
ctgggcctggcgtctgaggtgttgttcaagtgtgtgtgcgccatcgggtttgcgggcgat
ggcttcctgtgtggagaagactctgatctggatggctggcccaactacagattaccctgc
aagcagaatgcaacctatcactgtcatagggataattgccccatgataccaaactctgga
caggaagacctggacaaagacggacagggagacgcctgtgatcctgatgacgacaatgat
gacatcatagatgagagggacaactgcccgctggtgtacaaccctcggcagtttgattct
gacagagatggggtcggagaccgctgtgacaactgtccgtttgatagcaacccgctgcag
acagacactgatgacgacggagagggagacgcctgcagcattgacattgatggagatgag
attctgaatgaccatgacaactgtcccttagtctacaacactgaccagagggacaccgac
ctggatggtgttggagaccagtgtgacaactgtccccttctacacaaccctctgcagctc
gactctgatagtgacctagtgggggacatgtgtgacaacaatgaggacatcgatgaggat
ggccaccaaaactctctagacaactgtccgtacatcgccaatagcaaccaggctgaccat
gacaacgacgggaggggagacgcctgtgaccatgatgacgacaacgacgggatccccgac
gaccgggacaactgcagacttgtgcccaacagggaccagagggactctgatggtgatggg
agtggagatgcctgctttgatgactttgacaatgacagtattccagatgcgctggatcca
tgcccgctgaaccaggatattgggtctacagacttcaggaagtttcaggttgttttgttg
gaccctaaaggcaccacacagtctgaccctctctgggtgatccgcagccaaggcaccgag
ctgctgcagacggccaactcagaccctggcatcgctttaggatatgacaagttcagcgcg
gtggacttcagtgtgacattttatgtaaataccaaccgagatgacgactacgcaggcatt
gtgttcgcctaccagtccagtcgacgcttctacgttgtcatgtggaaacaggtgtctcag
gcctactgggagaaaaagccctccaaagcctttggcacagcgggagtctcgatcaaactg
gtcaactccgccacaggacccggggagtatctacgcaatgccctgtggcacactggaaac
acccgacaccaggtcagaacattgtggcatgatcccaataaaattggctggaaggactac
acagcttaccgcatgcaccttatccacagacccaagactgggttcatcagggtggtggtg
tacgagggcagggagattttatctgactcgggggcggtgtacgaccacaccctggctgga
ggcagactgggactgtttgtcttctctcaggaacacgtcctcttctcagacctcagatac
gagtgcagaggtaagatatcctgtctaaacatctgtcctgacttctga
DBGET
integrated database retrieval system
