Epinephelus fuscoguttatus (brown-marbled grouper): 125881076
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Entry
125881076 CDS
T08419
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125881076 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efo03400
]
125881076 (msh2)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125881076 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
125881076
NCBI-ProteinID:
XP_049419987
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Position
LG20:complement(26931845..26941255)
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AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVKDLLLVRQYRVEVYKNHSKSSKEHDWKIEFKA
SPGNLTQFEEVLFGGGTGAVGCAGVVAVRFATGGDGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGSADGSKLREVVERGGVLVSDRKRAEFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPALITAL
ERYSGSYQVLLEAVFLSPLQDLNTDFLKYQEMIDTTLDMNQIDHHEFLVKASFDPVLSEL
REKMDTLEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTRNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
LDAVVSFATASVSAPVPFVRPQLLADGCRRMELQQARHPCMETDADTAFIPNDITFIQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGSFCLFA
THFHELTALAAQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGDKMEQEEEPEAKRRRTDKQVGEKLIQDFLEKAKSLPAATMSE
EEVKAALRRMKEELVAKNNTYITDILSHCVPVRTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacagaacctgtccatggacagtgcagccgagcatggcttcctc
aacttcattttctccatgccggagaaaccagacactactttcaggatattcgaccgtaac
gactactacaccgttcacggaaaagacgccatcttcgctgcgaaggaggttttcaagacg
aacggggtcatcaaatatttgggctcaggcagtcgcaagctggagagcgtggtcctgagc
aagctgaactttgaggcctttgtgaaggacttgctgctggtgaggcagtacagagtggag
gtgtacaagaaccacagcaagagcagcaaggagcacgactggaagatcgagttcaaggcc
tctccaggaaacttgactcagtttgaggaggtcttgttcggcggtggaaccggtgcagtg
ggttgtgcaggagtcgtagccgtgcggtttgccacaggaggtgatggacagcgggtggtc
ggcgtcggctacgtggacgcggcccagagaacgatgggagtgtgcgagtttccggacaac
gagatcttctccaacctggagtccctccttgtccagatcagccccaaagagtgtctcctg
gcccagggcgaaggcagcgctgacggcagtaaactacgagaggtggtggagcgtggcggc
gtgctggtctctgacaggaagagagcagagtttagcagcaaggacatggtccaggatctc
aacaggctgctgagggccaagagaggagagactgtggcgagcaacacgctgcccgagctg
gacaaacaggtggccatgtcgtgcttggctgcagtggtgcgattccttgagctgctctct
gacgagtccaacttcaactccttcagtctgaccactctggacctgggtcagtacatgagg
ctggacaacgctgccgtgagggctcttaaccttttccagggatcacctgacgacaccagt
ggagctcactcattggctggtctgttgaacaaatgccgcacaccgcagggtcagcggctg
gtcaaccagtggatcaaacaaccactcatggacaaaaccaaaatagaggaaaggctggac
ctggtggagagcttcgtgtgcgactctgagctcaggcagacctgtcaggaggatttactg
cggcggtttcctgatcttcaccgcctggccaagaagttccaccgtcactctgcgacgctg
caggactgctaccgcgtctaccaggctgtgagccagatccctgcactcatcacggccttg
gagagatactcaggtagctaccaggttctgttggaggcggtgttcctctctcctctccaa
gacttgaacactgacttcctgaagtaccaggagatgattgacaccacgctggacatgaac
cagatcgaccaccatgagttcctggtgaaggcgtcgtttgatccggtgctgagtgagctc
agagagaagatggacacgctggagaagagcatgcaggcggtgctcaacagtgcagcgagg
gaactaggtctggacgccggaaagacggtgaagctggagtcaaatgccatgctgggtttt
tacctgagagtcacctgcaaagaggagaagagcctgaggaacaacaagaaattcaccacg
ctggacgtgcagaagaacggagtgcgcttcacaaacagtaagctgagctctctgaatgag
gagtacaccaggaacagggaggagtacgaggaggctcagaatgccatcgtcaaagagatc
atcaacatcgcctcaggttatgtggatcccctccagacactgagcgacgtgatagcgcag
ctggacgcggtggtgagtttcgccacggcgtccgtctcggctcccgtgccgttcgttcgg
ccccagctgttggcagacggctgcaggcgtatggagctgcagcaggccagacacccctgc
atggagacggacgcagacaccgccttcatacccaatgacatcaccttcatccagggggag
aagaacttctatattattacaggaccaaatatgggcggcaagtcgacgttcatccgtcag
gtgggcgttatcgctctgatggcccagatcggctgctttgtcccatgtgagaaggcggag
cttagtgtgattgacagcatcctggccagggtgggagcgggagacagccaggtaaaagga
gtgtccacctttatgtcggagatgctggagacggctgccatcctgcgctcggccacggag
aactcgctcatcataatcgacgagctcggcagaggcacgtctacgtacgacggcttcggc
ctggcctgggccatcagcgagcacatcgcctccaaaatcggctccttctgtctgtttgcc
acccacttccacgagctgacggcgcttgcagcgcagcagcccaccgtccacaacctgcac
gtcacagccctgacctcccacaacacactcaccatgctgtacagagtcaaaccaggtgtg
tgtgaccaaagctttggaatccacgttgctgagttggcttgcttcccgccatcggtggtt
gccatggctaaggagaaggcggaggagctggaggagttccaggaacctgcgggggataag
atggagcaggaggaagagcccgaggccaagagacgacggacagacaaacaagtgggggag
aaactgatccaagacttcctggagaaggcgaagtcgctccctgctgccaccatgagtgaa
gaggaggtgaaggcggcactcaggagaatgaaggaggagctcgtcgccaaaaataacacg
tatatcacggacatcctttcacactgtgtcccagtaagaacagcttaa
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