Epinephelus fuscoguttatus (brown-marbled grouper): 125881574
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Entry
125881574 CDS
T08419
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03271
Virion - Rotavirus
efo04145
Phagosome
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04514
Cell adhesion molecules
efo04530
Tight junction
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
efo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
125881574 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125881574 (itgb1a)
04514 Cell adhesion molecules
125881574 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125881574 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125881574 (itgb1a)
04530 Tight junction
125881574 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125881574 (itgb1a)
04810 Regulation of actin cytoskeleton
125881574 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125881574 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125881574 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125881574 (itgb1a)
04515 Cell adhesion molecules [BR:
efo04515
]
125881574 (itgb1a)
04090 CD molecules [BR:
efo04090
]
125881574 (itgb1a)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125881574 (itgb1a)
Exosome [BR:
efo04147
]
Exosomal proteins
Proteins found in most exosomes
125881574 (itgb1a)
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin beta subunits
125881574 (itgb1a)
CD molecules [BR:
efo04090
]
Proteins
125881574 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
125881574
NCBI-ProteinID:
XP_049420702
LinkDB
All DBs
Position
LG21:32040900..32077619
Genome browser
AA seq
803 aa
AA seq
DB search
MDLKLLLISTLLGVFCFSSAQKEGNECINANAKYCGECIQAGAKCGWCKDPDFLKQGETV
STRCDEMQSLIKRGCDEGMIENPTGEQMVLRNKTVTNRKKGAEKLKPEEITQIQPQKLTL
TLRSGQPQSFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSDGKKFNTLVGQQHI
SGNLDSPEGGFDAIMQVAVCGDHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSHCKNGVVSEGESGRKCSNISIG
DEVMFTISVTSKGCPKQGKPETIKIKPLGFTEEVEITLNFICECECNKEGVKNSPLCHFG
NGTYECGACKCNEGRVGRQCECSSNDVATEDMDRTCRKDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGQYCECDNFNCDRSGNKLCGGHGRCECRVCVCDPMWTGSACDCSLDNSTCM
ASNKQVCNGRGMCECGICKCTDAKFQGPTCETCPTCPGVCTEHKECVQCRAFGTGEKKDT
CEKDCMYFNLIKVKDREKLPQPNDAVYPVMHCKERDANDCWFYYTYAVNNNTEKEVHVVD
TLDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQD
NPIYKSPVNQFQNPNYGRRAAVL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctgctcttgatctccacgttgttaggagtcttctgtttcagcagtgct
cagaaagaggggaacgagtgcatcaatgccaacgccaaatactgcggggagtgcatccag
gctggagccaaatgtggctggtgtaaagacccagacttcttgaaacagggtgagactgtg
tcgacccgctgtgacgagatgcagtctctgataaaaaggggctgtgatgaagggatgatc
gagaacccaactggggaacagatggtcctcaggaacaaaacggtgacaaatcgcaaaaag
ggagccgagaaactgaagccagaagaaatcactcagatccagcctcagaaactcaccctc
accctccgatctggtcagccccagtcttttgacttgaagttcaaacgagcagaagactat
cctatcgacctgtactacttgatggacctgtcctactccatgaaggacgatttggagaat
gtcaaaaacctgggaacaagtctaatgctggagatgtcaaagatcacctctgacttcagg
ataggttttggctccttcgtggaaaagacagtcatgccatacatcagcaccaccccagcc
aagctgcttaacccatgcacaggcgaccagaactgcaccagcccgttcagctacaagaac
gtcctaaagctgaccagcgatggcaagaagttcaacaccctggtgggccagcagcacatc
tctggaaacctggactctcccgagggggggtttgatgccatcatgcaagtggctgtgtgt
ggggatcatatcggctggaggaatgtgactcgtctgctagtgttctccactgacgctggc
ttccactttgctggcgatggcaaactgggcggcatcgttctgcccaatgatggaaaatgt
cacctggagaacaacgtgtacaccatgagccactactatgactatccctccatcgctcac
ctggttcagaagctgagtgacaacaacattcaaaccatctttgcggtcacagaagagttc
cagcctgtttaccaggagctgaagaatctgatcccaaagtccgcagtgggcactctgtct
gccaactcaagtaatgtaatcaacctgattatagacgcttacaactctctgtcgtcggag
gtcatcctggagaacagcaagcttccagagggagtgaccatagcctacacatcccactgt
aagaacggagtggttagtgagggtgagagtggaaggaagtgctccaacatctcaatcgga
gacgaggtcatgttcaccatcagcgtgacatctaagggctgtcccaaacaaggcaagccc
gagaccatcaagataaagcccctgggattcacagaggaggtggagatcacgctcaacttc
atctgtgagtgtgaatgcaacaaggagggtgtcaagaacagtccgctctgccactttggt
aacgggacctacgagtgcggagcctgcaagtgtaatgaaggccgtgtgggcagacagtgt
gagtgcagcagcaacgacgtggccacagaggacatggaccggacctgccgtaaagacaac
gggaccgacatctgcagcaacaacggagactgcgtgtgcggcacatgtgagtgcaagaag
agagacaaccctgaggagaggtacagcggccagtactgcgagtgtgacaacttcaactgt
gaccgttctggaaacaaactgtgtggcgggcatggacgctgtgagtgccgagtgtgtgtc
tgtgacccaatgtggaccggaagtgcttgtgactgttctctggacaacagcacgtgtatg
gccagcaacaagcaggtctgtaacggcagaggaatgtgtgaatgtggcatttgcaagtgc
accgacgccaaattccagggtcccacctgtgagacttgtcctacctgtccaggagtctgt
actgaacacaaagagtgcgtccagtgccgggcgtttggcaccggtgagaagaaggacacg
tgtgagaaagactgcatgtacttcaacctgatcaaagtgaaggacagggagaagctgccc
cagcccaacgacgccgtttaccccgtgatgcactgcaaggagagggacgccaacgactgc
tggttttactacacctacgccgtcaacaacaacacggagaaggaggtccatgtggtcgac
acgctggactgccccgccggtcctgacatcatccccattgtcgcgggcgtggtcgccggc
attgtcctgattggcttagccctgctgctcatctggaagctgctgatgatcatccacgac
aggagagagttcgccaagtttgagaaggagaagatgaacgccaaatgggacacgcaagac
aaccccatatacaagagtcctgtcaatcagttccagaatccaaactatggacgtagagct
gctgtcctttaa
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