Epinephelus fuscoguttatus (brown-marbled grouper): 125881640
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Entry
125881640 CDS
T08419
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125881640 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125881640 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125881640 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Laminin_I
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
125881640
NCBI-ProteinID:
XP_049420824
LinkDB
All DBs
Position
LG21:complement(39474433..39545696)
Genome browser
AA seq
3078 aa
AA seq
DB search
MKLLLLLLLMERVAAQQRGLFPAIFNLASNAKISSNATCGDPEPEVYCKLVEHVPGQPIK
NPHCARCDANSVLSKERHPITNAIDGTNRWWQSPSIKNGREFHWTTITLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGVTFEPWQFYAISDSECLTRYNMAPRLGPPTYKSDTEVIC
TSFYSRLDPLEHGEIHTSLINGRPGADDLTSDLLNFTSARYIRLRLQRIRTLNADLMTLS
AHDPRDIDPIVSRRYYYSIKDVSVGGMCICYGHAQSCPLDPVTKKLQCVCEHNTCGENCD
QCCPGYHQQPWQPGTISEGNTCEKCNCHNKADDCFYNQTVSELSLSLNIHGVHEGGGVCI
DCQQNTAGINCETCAAGYYRPAEVSPDADSPCVHCNCDLRGSQSSVCTSDDTQTGVSAGQ
CVCKEGFTGRQCDRCAFGFRDFPLCVRCECNLSGSTNTDPCSPCTCKENVMGAHCDLCKP
GFYNLQERNLLGCTDCFCFGVSDVCESSAWATAQVLHTDAWLRPSQSPNTPPVLHGNDVP
IPNNSSGHTHQHVLSWSAPNSFLGNKLVSYGGFLNYSVIYDIPLDNEDHSLPAHSDIIIE
GNGRLLRLSPPLLLFLSELSVRSVAVVMTPQQFVDIQTGFHITRDDLLSVLADVTSLTVR
VHLNASADGPIRLSTVSLDVTDSGSVSGIQAVSVETCECPWGYSGTSCEACLPGFYRMGG
VLFGGNCLQCECNDHASECDIDGVCLGCTHNTTGPHCDQCLPGFYGDATEGTADDCRLCP
CPLTEPSNSFSPTCALDASGQVSCDQCEDGYTGTNCERCASGFYGNPQVVGRACVRCDCN
GNVDIRQAGYCDTVTGECLHCLGNTAGRHCEVCRPGYYGDAVHAKDCQECGCDVSGSLSS
VCDVTTAQCSCRENVTGRTCDRCQPGFFGLQSGRGCQPCDCSQSTSLSESCDEEGRCQCV
EGVAGDKCDRCSHGYYGFHANGCKACTCDDTGGNCDPDSGKCICPAHTERDSCDRCEKGY
WGHDPATGCKPCSCSATGSSAPQCDLTNGHCRCKEGFSGRSCDQCAPGYHGYPACLACGC
DMAGTDEMFCNASLGVCDCRLGGECVCKVGVSGQRCEECVSGRFALSAENPEGCSPCFCS
GLSTDCEEKGGLYRVPITLGRSPRLLSVVSQSNLQGVVSGVYQQGGDMLLDTRQLNTSRL
AGPLYWRLPPQFEGPQLMSYGGLLSYIITFYAEDGSGLSNQEPQVLIRGGNMRKLVIYTD
MIVPSNSLRTRHDIRMTEHKWKYFNSVSEKSVSHADFLSVLSDVEYVIIKASYGTQLQQS
RISNITMETAVEAGSDEEGVARLIESCICPPGYTGLSCQDCAAGYFRQPLSELSSQSQKS
LFVRPCVRCRCNNHSESCDMETGACQGCQHHTSGRSCELCAPGYYGNVSGSISDCSLCAC
PLQDNSFSPTCESDGALGDLRCTACQTGYEGRYCERCSVGYYGNPSSVGGVCSQCNCSGW
GSLQPLCDPLIGQCECKAGVTGLSCDQCDERHVLQAAECVSCDDKCSGVLLDDLEKLHNH
FLSVNLSAVTMAPYRQLVLLENQTRVIQVAFSENSSVALHLSRVEDELRHLTSDLSTLLQ
QVPRLSDDLQKVGVSTNNSLSQCAVLLQSVGQLQENIKELQREAELLNHTTVEEFDSANQ
THQLEEVASMLETIRAVDLSAASAAANQELSLSESLVHSLQLDLLSSRMEVDNRLRLLSA
PLTVGMETLQYARTQLTKTAQQNTQTHTLLDDAHTLLLDYQSVHRNLSVDRLSVDAVMED
SQLLLDDTISLTEELTNTTSQVEVFHGHLDQWQPLLRKQVDSLVIGLEVTDALENVYRAE
SHALRFQSHAHSMHSSLSSVCNVTNASRLVQLDSDITHQVDSAQQVAVTAHISASVALNV
TVLSEQLMSEEGGAKLKVSTALLEESRQINETFEDLRLNVSTVTSRLRLVRDGIHNSTLF
LRQPTKELQSFSNISFVVLQQTHLQAAAAHSDLQEALRQLHRLRLQLQDSSSVVENTNNT
VTETNRLVTYTHTEANEVQQKLEEAEHRTERLMGRIKPLSTLGETLRRNLSDIRELINQA
RRQAASIKVAVQADRDCVRSYRPQTESSNFNTLSVILKTSRAENLLFYLGSNTTVDFLAV
EMHDGKVSLVWDVGSGSSRLEFPGLDITNNRWTRINATRFGAHVSLSVHQLESESATLPV
ITATSPGPSRVLDVDKNTVIHIGGLGSHTQRPAMLRSSTFQGCLGEASLNERNIGLWNYN
SREGECGGCFSSPQAEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLSPGGLLLYLASN
NTRDFLSMELVEGLVRLTFDLGSGSLILTSNRKYNTGVWYKITIQRNKRKGYLSIMAADQ
SSDKEVLEAESPGTASDLNRSDLDPIYIGGLPASRPIRRQVVSRSYVGCIKNVEIARSNF
DLLRDAYGVRKGCVLKAVRSVSVLAEGFVQIAPPSFRQEAELLFSFSTNNQSGVLLAAFS
DDHTQRQHFLSVHLVSGALEAELGEVGGATRRVMVMKPNGGSFSDGTKHSVIITISRKSL
SMQVDEGHIKSVSLLPGGFSRLSPASFFIGGLPSGEVSRLPIRLQNVSRWFRGCIQHLVV
GGVLVDLSGALRYEGAELDSCLLEEKVAGAVLPDDQDVEPTPDPVHPPVAPPTHLSALTP
GTLTCVSEAEPTFLPSAVQFGLSKHSHMTFIINPNTVKRSVSLRLSVRSRAADGLILLLS
DSKQMDFIVLRLTGGRLMMSADLGKGPASVTSSMVVNDGEWHTVSAEVSRRSVSVSVDGS
HPDAVSVKGNQLDVESRLYLGGLPHTLPTRRINVSSSFPGCIRSVILNGATLDLSKPTSQ
HHVASCFTKDQTGSYYNGSGYAALMRDGYKVGSDVSVSLEFRTSQSEGVFLGISSAKVDA
IGLEMIDGQVVFNVNNGAGRVSVRSVGHMLCDGRWHHLLARKTKNTLSLSVDGRSYTTPN
PYPQSTSAETNNPVYLGGFPAGVKQNCLSISTRFRGCLRNLQLIKSHLSDALDLSSAHFL
LGVTPNSCPVWEQRPAEL
NT seq
9237 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctgttgctgttgttgctgatggagcgagttgcagctcagcagagaggtctg
ttcccggccatctttaatttggccagtaacgcaaagatcagcagtaacgcaacatgtgga
gatccagaacctgaagtttactgtaaactagtggaacatgttccaggacagccaattaag
aaccctcactgcgccagatgtgacgccaactctgtcctgtccaaagaacgccatccgatc
accaacgccatcgacgggacgaatcggtggtggcagagtccgagtatcaagaacggacga
gagttccactggactactataactctggatctcaaacagatctttcaggttgcttacatc
atcatcaaggcagcaaactctcctcgaccaggtaactggatcctggagcgctctctggac
ggtgtgacctttgaaccctggcagttttatgccatcagtgactcagagtgtttaactcgt
tacaacatggcgccaagactcggaccgccgacctacaagagtgacactgaggtcatctgt
acgtccttctactccagactggacccactggaacatggagagatccacacttctctgatt
aacggacgacccggagccgatgatttgacctctgacctcctgaactttacatcagctcgt
tacatcagactgaggcttcagcgaatcagaacactcaatgctgatctgatgacgctaagc
gcccacgacccccgagacattgaccccattgtcagccggaggtattattactcaatcaaa
gacgtctctgtcggtggcatgtgtatctgttatggccacgcccagagctgcccactggac
cctgtcaccaagaagttgcagtgtgtatgcgaacacaacacctgtggagagaactgtgat
cagtgttgccctggttaccaccagcagccatggcaaccaggaaccatctccgagggaaac
acttgtgaaaagtgtaactgtcacaacaaagccgatgactgtttctacaatcagaccgtc
tctgaactctctctgagtttaaacattcacggtgttcatgagggaggcggagtctgtatc
gactgtcaacaaaacaccgctgggatcaactgtgagacctgtgccgctggatactacaga
cctgccgaggtgtctccagatgcagactctccctgtgtccattgtaactgtgacctgaga
ggatcacagtcttcagtttgcacttcagacgacacacagacaggtgtgtctgcaggtcag
tgtgtgtgtaaggagggttttacaggtcgacagtgtgatcgctgtgcgtttggattcaga
gattttcctctctgtgttcgatgtgagtgcaacctgtctggcagcaccaataccgacccc
tgcagcccctgcacctgcaaggaaaacgtgatgggcgctcactgcgatctgtgtaaacca
ggtttctacaaccttcaggagagaaatctgctcggttgcactgactgtttctgtttcggt
gtgtctgatgtctgtgagagctccgcctgggccacagctcaggtgcttcatacagatgct
tggctccgcccttctcagtcccccaacacaccacctgttctgcacggcaacgacgtcccc
attcccaacaactcttctggccacacccaccaacacgtgctgtcttggtcagcgcccaac
agtttcctcggaaacaagctggtgtcctacggaggtttcctgaactactcagtgatttat
gacatcccactggacaatgaagaccattctctccccgcccactctgacatcatcattgag
ggaaacggtagacttcttcgtctctcacctcctctcctcctcttcctctctgagctgtct
gtgcgctcagttgctgtggtaatgaccccgcagcaatttgtagacattcagacaggtttt
cacattacccgcgacgacctgctgtcagtcctggctgatgtgacatcactgacggtcaga
gttcaccttaacgcctctgctgatgggccgatacgcctcagcacagtgtctctggatgtt
acagactctgggtcagtttctggaattcaggcagtttctgtggagacatgtgaatgtccg
tggggttacagcggcacttcctgtgaggcatgtctcccaggtttctacaggatgggcgga
gtcttgtttggaggaaactgtctgcagtgtgaatgtaatgaccacgcctccgagtgtgac
atcgatggagtttgtctgggttgtacccacaacaccactggtcctcactgtgatcagtgt
cttcctggtttctatggtgacgccacagaggggacagcagacgactgccggttgtgtcca
tgtcctctgactgagccgtccaacagtttcagtcccacctgtgctcttgacgcatctggt
caggtgtcatgtgaccagtgtgaggatggatacacaggaaccaactgtgagaggtgcgcc
agtggtttctatggtaacccacaggtagtgggcagggcctgtgtccgttgtgactgtaac
ggtaacgtggacatcagacaggcggggtactgtgacaccgtcactggggagtgtctgcat
tgcctcggcaacactgctgggagacactgtgaggtctgtcggcctggttactatggtgac
gctgtgcatgcaaaggactgtcaagagtgtggctgtgatgtcagcggctccctctccagc
gtatgtgatgtcacaacagctcaatgttcgtgcagagaaaatgtgacaggacgcacctgt
gaccgctgccagcctggcttcttcgggctgcagagtggacggggctgtcagccctgtgac
tgtagccaatcaacatccctctctgagtcatgtgatgaggaggggcggtgccagtgtgtg
gagggcgtggctggagacaagtgtgaccgctgtagccatggttactatggtttccatgcc
aacggctgcaaagcatgcacctgtgatgacacaggaggaaactgtgaccctgacagcggc
aagtgcatctgccccgcccacacagagcgagactcctgcgacaggtgtgagaagggttac
tggggtcacgaccccgccacaggctgcaagccgtgcagctgcagtgcaacaggaagttca
gcccctcagtgtgacctgaccaatggacactgtcgatgcaaagaggggttctctggcagg
tcatgtgaccagtgtgcccctggttaccatggctacccagcatgcttggcatgtggctgt
gacatggcgggaacagacgagatgttctgcaacgcatcactcggagtgtgtgactgcaga
cttggcggcgaatgtgtgtgcaaggtgggagtttccggtcagcggtgtgaggagtgtgtc
tctggtcggttcgctctgtccgctgagaatccagaaggctgctcgccatgtttctgttca
ggactcagtacagactgtgaggagaagggcgggctctacagagtacctatcaccctgggc
cgctctcctcgtctgctctcagtggtcagtcagtccaacctgcagggtgtcgtatcagga
gtgtaccagcagggcggagacatgctgctcgacacccgacagctcaacaccagcaggttg
gctggcccgctctactggagactgcccccccagttcgaagggccacagctgatgtcatac
ggcggtctgctatcttacatcatcaccttttacgctgaggatggctcaggattgtccaat
caggagcctcaggtcctaataaggggcgggaacatgaggaagctggtgatatatactgac
atgatcgtccctagcaacagcctcaggacacgtcatgacatcaggatgacagagcacaag
tggaagtattttaactcagtttcggagaagtcggtgagtcacgctgacttcctgtccgtc
ctcagtgatgtcgagtacgtcatcatcaaggcttcgtacgggacacaattgcagcagagc
aggatctctaacatcaccatggagacagcagtggaggcggggtcagatgaagaaggcgtg
gccagactgatcgagtcctgcatctgtccacctggttacacaggactgtcctgtcaggac
tgtgctgcaggttatttccgtcagcctctgtctgagttgtcgtctcagagtcagaagtct
ctgtttgttcgaccttgtgttcgatgtcgctgcaacaaccacagtgagagctgtgacatg
gagactggagcctgtcagggctgccaacatcacaccagtgggcggagctgtgagctgtgt
gctccggggtattatgggaacgtcagcggctccatcagcgactgctcgctgtgtgcctgc
ccccttcaggacaacagtttcagtcccacgtgtgagtcagatggagccctcggtgatctc
cggtgcaccgcctgtcaaacaggatacgaggggagatactgtgagaggtgttctgttggt
tactatggtaacccctcatcagtgggcggggtgtgttcgcagtgtaactgcagtgggtgg
ggctcactgcagccgctatgtgacccactgattggacagtgtgagtgcaaggctggggtc
acaggtctgtcatgtgaccagtgtgacgagaggcacgtccttcaggcagcggagtgtgtg
tcgtgtgatgacaagtgttccggtgttctgttggacgacctggaaaaactacacaaccac
ttcctgtctgtcaacctgagtgctgtcaccatggcgccataccgccagctggtgttactg
gagaaccagaccagagtcatccaggtggcgttttcagaaaacagctcggtcgctcttcat
ctgtccagagtggaagatgagctcagacatctgacctctgacctcagcaccctgctgcag
caggtcccacgtctgtctgatgacctgcagaaagtgggcgtgtccaccaacaacagcctt
tcccagtgtgcagtgctgctgcagagcgttgggcagctgcaggaaaacattaaggagctt
cagagggaggcagagctgctgaaccacaccacagtggaggagtttgattcagccaatcag
acgcatcagctggaggaggtggcgtccatgttggaaaccatcagagctgtcgacctctca
gccgccagtgctgcagccaatcaggagctcagcctctcagagtctctcgtccactcgctg
cagctggacctcctgtccagcaggatggaggttgacaacaggctccgactcctctcagcc
cccctcactgttggcatggaaacactgcaatatgcacgcacacagctgaccaaaaccgcg
caacaaaacacacaaacacacactctgctggacgacgcacacacattgctgctcgactac
cagtctgtccacaggaacctgagtgtggaccgtctgtctgtggacgcagtgatggaggat
agtcagctgctgctggacgataccatcagtctgacagaggagttaaccaacaccacctca
caggtggaggtgttccacggtcacctggatcagtggcaacccctgctgaggaaacaggtg
gacagtctggtcattggactggaggttactgatgctttggagaatgtttaccgtgccgaa
agccacgccctccggtttcagagtcacgcccactccatgcacagctctctgtcatcagtt
tgtaacgtaacaaatgccagccgattagttcagcttgacagtgacatcacacaccaggtt
gactccgcccagcaggttgctgtgaccgcccacatctccgcctctgtcgctctcaatgtg
accgtcctatcagagcagctgatgtcagaggagggtggagccaaactgaaagtcagcacc
gctcttttagaagaaagtcgacagatcaacgagacattcgaagacctgcggctgaatgtc
tccacagtaaccagcagactgcgactggtcagagatggcatccataactccaccctcttc
ctccgtcagccaaccaaagagctacagagcttctctaacatttcattcgtggtgctgcag
cagactcaccttcaggctgcggcagcacactccgacctgcaggaggcgctgcggcagctg
cacagactcaggctgcagctgcaggattcttcctctgtggtggaaaacaccaacaacaca
gtgactgagacaaaccggctggtgacttacacgcacaccgaagccaatgaggtgcagcaa
aagctggaggaggcagagcatcgtacagagcgtctgatgggtcggatcaaaccactgagc
acgctgggagaaacactgagaaggaatctgtcagacatcagagagctgatcaatcaggcc
agaagacaggctgcctcgatcaaggtggcggtgcaggcggacagagactgcgttcgatcc
tacagaccacagactgagtccagtaacttcaacactttgagtgtgatcctgaaaacgtct
cgtgctgagaacctgctgttctacctgggcagcaacaccacggtggacttcctggcggta
gagatgcatgacgggaaggtgtctctggtgtgggatgtgggttcaggcagcagcaggctg
gagtttcctggactggacatcaccaacaacaggtggaccaggatcaacgccacacggttc
ggggcacatgtctctctgtcagtccatcagctggagtcagagtcggctacattgcccgtg
ataacagcgacatcaccgggaccttccagagttttagatgtggacaaaaacacagtgatc
cacattggaggactgggatctcacactcagcgtccagccatgctgcggtcctccaccttc
cagggctgtctgggtgaagcatctctcaatgagagaaacatcggactctggaactacaac
agcagagagggagagtgtggaggctgcttcagcagtccacaggcggaggagacgtcgttc
cactttgatggatctggattctcattggttcagaagtctctgcgagcaacctccacctcc
atcgtcctgctgtttaaaaccctgtcgccaggcggattactgctgtacctggcctccaac
aacactagagacttcctgtccatggagctggtggaggggcttgtccgtctaacctttgac
cttggctcaggttctctgattctgacctctaacaggaagtacaacaccggagtctggtac
aagatcactatacagaggaacaaacgcaaaggttacctgtccatcatggcagccgaccaa
tcatcagacaaggaggtgttggaggcggagtcacctggaactgcctctgacttgaaccgc
tccgacctggaccccatctacatcgggggacttcctgcctccagaccaataaggcgacag
gtagtctccagatcgtatgtgggctgcataaagaacgtggagatcgctcggtcgaacttt
gacctactgagagacgcatacggagtcaggaagggctgcgtcttgaaggcggtacgcagc
gtgtcggtgttggccgaaggcttcgttcagatcgctcctccatcattccgtcaggaagcg
gagctcctcttctccttctctaccaacaaccaatcaggagtcctgctggctgcctttagt
gacgaccatacacagagacagcacttcctgtctgtccacctggtctcaggcgcattagag
gcggagcttggtgaggtaggcggggctactcggagggtgatggtgatgaaacctaatgga
ggatccttcagtgatgggacaaaacactctgtgattatcaccatcagcaggaagtctctg
tccatgcaggtggacgagggacacatcaagtctgtctctctgttgccaggcggattttct
cgtttgtcaccggcctctttcttcattggtgggctgccatcaggggaggtgtctcgtctg
ccaatcagattacagaatgtgtccaggtggttcagaggctgcatccaacacctggtggtg
ggcggagtgctggtcgacctatcaggagctttgaggtatgagggggcggagcttgacagc
tgcctattggaagaaaaggtcgcgggggcagtactacctgatgaccaggatgtagaacca
actcctgaccccgtccacccgcctgtggccccacccacacacctgagcgccctgacacct
ggaacattaacatgtgtgtcggaggcggagccgaccttcctgccgtcagcagttcagttt
ggtttgtccaaacacagtcacatgaccttcatcattaatcccaacactgtcaaaaggagt
gtgtcgctgaggttgtcagttcggagcagagctgcagacgggctgatcctcctcctctct
gactccaaacagatggacttcatcgtcctcagactgacaggggggagactgatgatgtca
gctgacctggggaaaggccctgcctccgtcacctcatccatggttgttaatgacggagag
tggcacactgtgagcgccgaggtcagccggcggtctgtgtcggtgtctgttgacgggtcg
catccagacgctgtgtctgttaaaggaaaccagctggacgtggagagcagactctacctg
ggaggactgccgcacacgctgcccaccaggaggattaacgtgagcagcagttttccaggt
tgtattcgctctgtcattctgaacggagccacattggatctgtccaagcccacctcgcag
caccatgtcgcttcctgtttcaccaaagaccagacaggaagttactataacggcagtgga
tacgccgccctcatgcgtgatgggtacaaggtgggctcagacgtgtctgtgtctctggag
tttcgaacaagccaatcagagggagtatttttgggaatcagtagtgcaaaggtggatgcc
atcggactggagatgattgatggacaggtggtgtttaacgtgaataacggggcggggcga
gtgtcggttcgttctgttggtcacatgttgtgtgacggacggtggcaccacctgctggcc
agaaaaaccaaaaacaccctgagtctgagtgtcgacgggcggagttacactacccccaac
ccttacccacaatccacctctgctgagaccaacaacccagtttacctgggtgggtttcca
gctggagtcaaacagaactgcttgtccatcagcaccaggttcagaggttgtctgaggaac
ctgcagcttattaagtctcacctgagtgatgctctggacctgagctccgcccacttcctg
ttgggtgtcactcctaactcgtgtcctgtatgggagcagcgcccagccgagctctga
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integrated database retrieval system
