Epinephelus fuscoguttatus (brown-marbled grouper): 125881709
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Entry
125881709 CDS
T08419
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125881709 (rnf6)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125881709 (rnf6)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125881709 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125881709
NCBI-ProteinID:
XP_049420958
LinkDB
All DBs
Position
LG21:complement(21102890..21110028)
Genome browser
AA seq
719 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDGNLLGTPGEVTAEELRQRLD
GAKERMSSQPRTEQRLQTADSGEQQGSSSEGEERGAGGRRGAGGTEPGAETSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDAADTAE
LPVTAPNTTSPSIRTASSFSNPRPSTTQRPVPYPTPRPALSRRMQTRRTRSSTTTLSMSP
PALPAPVAAPAAAQRRSATLHSLAPPPTVPNPSLDQTTPLQHQALNAEVEQGSDDISPSI
DCPRVSPQSGSQAPAVGHESRGSRTRSRGRARRAAAGGGVSSRLSRRSRSPLHRIPVAST
TSPSSIGVSGSSIHTVEPGSGTSSVSMETGEAVAEPAALTEPVVETIERESESHVVGAGS
SAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVA
PSHTDASVTNSSTSPASRLHTNESEAGQVGTGGVDQERVGLVGSEEDQGGQARLGGGVVS
TTEGRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQAN
LEGEMGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacggcggaggcaggcagagcgtcttcgtcgggag
gaggcatactatcacttcattaatgaattgagtgaagaggagtaccgcctaatgagagac
ggcaacctgcttggcacccctggggaggtgacagctgaggagcttcggcagcgtcttgat
ggagcgaaagagcgcatgtcatctcagccccgtactgagcagcgcttgcagactgctgat
tctggagaacagcagggcagtagcagtgagggagaggagagaggggctggagggagacga
ggagcagggggcacagagcctggagcagaaacttctaatggtgactcattactggagtgg
cttaacactttcagacgcactggcaatgctactcgcagtgggcagagtggcaaccaaaca
tggcgtgctgtcagccggaccaaccccaacagtggagaattccgctttagcctggagatc
aacattaaccatgatcagccggagccgggggagcataatgatgctgcggacactgcagag
ctgccagtgactgccccgaacacaacttcaccctctatacgcactgcttcctcgttctcc
aaccctcgcccttcaaccacgcaaaggcctgtcccgtaccccaccccccgcccagccctc
agtaggaggatgcagactcggcgtacacgcagcagcactaccactctttctatgagtccc
cctgcacttcctgcaccagtggccgccccagctgctgctcagaggagaagtgctactttg
cactctttagcaccacctcccactgtccccaacccttctctcgatcaaacgacacctttg
caacatcaagccctgaatgcagaagtagagcagggcagtgatgatatatctccttctata
gactgtccccgtgtgtcaccgcagtctgggtctcaggccccagcagtgggacacgaatcc
cgtggcagtaggactcgatcacgtggtcgtgcacgcagggctgcagcagggggtggggtg
tcatcccgcttgtcaaggcgcagccgttcccccttgcacagaatacctgttgccagtacc
acttcaccatcaagcattggtgtcagtggctctagcatccacactgttgagccaggtagt
ggcacaagctctgtttccatggagaccggggaggctgtggcagaacctgcggctctaaca
gagccagttgtagagacaatagaacgcgaaagtgaatcgcatgtagtaggagcaggaagt
tcagcggtgcgacggcacccaaccatcatgttggacctgcaggttagaaggattcgacct
ggtgaaaaccgcgatcgggacagcatcgccagtagaacgcgttctcgtgcccgtgttgct
gagaatactgtcacatttgaaagtgacagtggtggatttagacgcaccatctcccgctct
gagcgagctgggattcgtacctatgtgagcaccattcggattccactgaggcgcatcagt
gagacaggcctgggggagcccaactccaccgccctgcggtccatcttgcgccagatcatg
accggatttggggagctgagctccttaatggagacagaggctgattctgaaactgttgca
cctagccacacagatgcaagtgttacaaatagtagcaccagcccagccagtcgtctacat
acaaatgagagtgaagctggccaggttggtacaggtggagtagatcaggagagggtgggg
ctggtgggaagcgaggaggaccagggtgggcaggccaggctcggaggaggtgtagtgagc
accacagaaggacgagccaccagcagagacaccaacaacctggtagaaaacggtactcta
cccatcctgcggctggcacacttcttcttgctcaacgacgaggaggatgacgaacaccct
aggggcctgaccaaagagcagattgacaatctatccacgcgtacatatggtcaggccaac
ctggagggggagatgggtcgtgcgtgcagtgtttgcatcaatgagtatgcccagggcaac
aagctgcgccgcctgccctgcgcccatgaatttcacatccactgcatcgaccgctggctc
tctgaaaacaacacctgccccatctgcaggcagcccatactcgctgtgcatcatgactga
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