Epinephelus fuscoguttatus (brown-marbled grouper): 125881794
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Entry
125881794 CDS
T08419
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125881794 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efo03032
]
125881794 (topbp1)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125881794 (topbp1)
DNA replication proteins [BR:
efo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125881794 (topbp1)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125881794 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
125881794
NCBI-ProteinID:
XP_049421096
LinkDB
All DBs
Position
LG21:15537189..15554958
Genome browser
AA seq
1521 aa
AA seq
DB search
MSKGDKEGFIVKFVESNGQRTEYAAKAYEAISELQSDKYLKTIEEDAVLQMDQKDKSLFV
FSSFTSPAFLHCKRLGCRVVSPLVVLYCLQQQHCVPRAEKPVYSMAMADITISCTSLDKA
TRTEVMDLVQLMGGRVYLDLNVSVTHLIAGEVGSKKYLVAASLGKPILLPTWIKACWEKS
QDSLFRYTDLPIEDYLCPVLRGCTVCVTGLSSTERKEVQRLCEQHGATYSGQLKMNECTH
LIVSEPTGQKYECAKKWNVYCVSLHWLFDSIEKGFCQDESRYAVERNASKTTRPHTSTPT
GTNKKDEGPSLLGLSHISVNASMTINDTALTNGSISRLEAPDPIDTLDLTVCPADDILDG
CKLYLCGLPGKKLEKLKRLVNAAGGLRFNQPSEELTHVVMGELDQELKNFLSKATHRPHV
VTVQWLLDSFNKGSLPPEADYLHPDCLPLAAAAVTVPAHHTPTSRVSAGPPAASPSTPRQ
TRAEEDLLSQYMDDDPTVVDMPPPAEGSSRRSVSISVEPQPESWAPNHTRGPGPEADSTL
QEASAAGLFFKKRFLLVGFGTEAETQLSLLVMENGGRVLMGRTRIVADYAVVPLLGCSVE
ATVDEVVTDTWLAMCVEKECVLQLSSNPLFTPVPVMDGRFPLKDCVLSVSQFTGAERESL
VDLAKHLGANVQDYFVRLANQKKGMLASTHLVLQSPEGTKYQAAKKWGLPAVTMNWILES
ARTGQRAEEGRFLVDLPPSPERDDESFVGGSQRQAMPPPARSSPEIPLLGLQSGKAVTPL
DLGRFQSKVFRSVLDEKKPKEDISTPKQNQGGGKRNPLQKEAPLQLDTPSRFLSRDQLFR
PSFNVKDALGDLETPGGRSKPGERVDTPLTDVINRNLRVALANSSRNSTSDMQAISASPQ
FTKTTEKEVPEKEAGPLTGVVICVGKKLSKMQSELNAIAASLGADFRWACDDTVTHYIYQ
GRVGDNTREYRGVKERGLHVVSQCWLQACADEQRHVPESLYPFTYNPKMSLNLSQVPNSS
QRSPPLTRTQRKDATDAKDDKSEHVATEEATTLRRVSDGSVDREEMNDNADKSDISETLE
MRENLQRQLQEIMSATKLTTGRRTSVRLSRMGSGGADSGPNTPDGSRVGRCGSRRTLEAL
RVSREAAMDFNTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSEPFAPPPPPTAE
NGPQFRDSMTDSELVEMAACEVIDQHMGPRITTPLTERRENDLLTPEAPSIAFPLAKPAV
APEPQEKREEEKQPPRFQLSSLSPQERIDYSHLIEELGGVVLDKQSFDPSCSHIIVGTPL
RNEKYLAAMAAGKWILHRSYLEACRSVGRFIPEEEYEWGSSSILDALPSITSQQRRLALA
AMRWRKALQGHSEQGGAFSGWTVMLNIDQSRESGFRRLLQSGRAKVLPSPSPSLYKEATH
LFADFSRLKPGDFRVDVSEATSHGVTCLKPEYIADYLMQEPTPPIELYYLTEAPSEETPD
TPSRKRKAAPDNSRLKKTRLT
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaggagacaaggaaggcttcattgtcaagtttgtggaaagtaatggacaaagg
acagaatatgctgccaaagcttatgaggccatttcagagctccagtctgacaagtacttg
aaaaccatcgaagaagatgcagttttacagatggaccagaaggacaagtctctgtttgtc
ttcagcagcttcaccagcccagcctttctgcactgcaaaaggctcggctgccgggtggtg
agtccactggtggtgttgtactgtctgcagcagcagcattgtgttcccagagcagagaaa
cccgtctatagcatggccatggctgacatcactatttcctgcaccagtctggataaagca
acacggacagaggtgatggatctggtgcagctcatgggtggacgggtctatctggactta
aatgtatctgtcacacacctgatagcgggagaggtgggcagcaagaaatatctggtagct
gccagccttggtaaacccatcctgctgcccacatggatcaaagcctgctgggagaaatct
caggacagtcttttcaggtatacagatctgcccattgaggactatctgtgccctgtgctg
cgtggctgcactgtttgtgtgacaggcctctccagcacagagcgcaaagaggtgcagcgg
ctctgtgaacagcatggagccacctacagcggtcaactcaagatgaatgagtgtacacac
ctcatcgttagtgagccgacaggtcagaagtacgagtgtgcaaagaagtggaatgtgtat
tgtgtgtctttgcactggctgtttgacagcatagagaagggcttttgtcaagatgagagc
aggtacgctgtggagcgtaatgcatcaaagacaactcgacctcacacctcaacccccact
ggcaccaacaagaaggacgagggtccatctctgttgggtttaagtcacatatctgtcaat
gccagcatgacaataaatgacacagccctcaccaacggcagcatcagccgcctggaggct
ccagaccccatagacactctagatctcaccgtctgcccagctgatgatatactggatggc
tgtaagctgtatctgtgcggcctgccagggaagaaactggagaagctgaagcgtcttgtg
aatgctgcaggaggtctgcgcttcaaccagcccagtgaggaactcacacatgtggtcatg
ggagagctggaccaggagctcaagaattttctctccaaagcaacacatagaccccacgta
gtgacagtacagtggctgctggacagtttcaacaaaggcagtctacccccagaagcagat
tacctccacccggactgtctgcccctggctgcggctgctgtaactgtgcctgcccatcac
actcccacctcccgggtctcagctggtccgcctgcagccagtcccagtactcccagacaa
acaagagcagaggaagatctgctctcacagtacatggatgacgaccctacagtagtggat
atgcccccaccagcagagggcagcagcaggaggtccgtcagtatatctgtagagcctcag
cctgaatcctgggcaccaaaccacaccagaggaccaggaccagaggcggactcgaccctg
caggaagccagcgctgcaggcctgtttttcaagaaacgtttcctccttgtgggctttggc
actgaagccgagacccagctttctctactggtaatggaaaacggaggcagggtactgatg
ggtcgcacacgtattgtggcagactacgcggtggtaccactattgggctgttcagtggag
gcaacagtggacgaggtggtcacagatacctggctggccatgtgtgtggagaaggagtgt
gttctgcagctgtcctccaaccctttgttcacccctgttcctgtgatggacggacgtttt
cctctcaaagactgtgttctgtctgtcagtcagttcactggagcagagagggagtctttg
gtagacctggccaagcacctcggagccaatgtccaggattactttgtgcgcctggccaac
cagaagaaagggatgctggccagcactcatctggtgctgcagagccccgagggcacaaag
taccaggcagccaagaaatgggggcttccagccgttactatgaactggatactagagtct
gctcgaactggccagcgggcggaggaggggcgttttctagttgacctgccaccctcacca
gagagggatgatgagagttttgttggtggctcccagaggcaagccatgcctccaccagca
cgttcgtccccagagatccctctcctgggtctccagagtggcaaggctgttaccccactg
gatctaggccgcttccagagcaaagtgttccgctctgtcttggatgagaagaaaccaaaa
gaggacatcagcacccccaaacaaaaccaggggggtggcaaaaggaacccccttcagaag
gaagcacctctgcagctagacactccgtcccgtttcctcagcagagaccagctgttcagg
ccttccttcaatgtcaaggatgcacttggagatcttgagactccagggggaagatccaaa
ccaggagagagggtagatactccactgactgatgtcatcaacagaaatctgagggtagct
ctcgccaacagctcccgaaattccacctcagatatgcaagccatctctgctagcccccag
tttaccaagacgactgagaaggaggtcccagaaaaagaagccggccctctgactggtgtc
gtgatctgcgtagggaagaagctgagcaaaatgcaaagtgaactcaacgccattgctgcc
tcacttggagctgacttcaggtgggcttgtgatgacacagtgacacactacatctaccag
ggccgtgttggggacaacacccgggagtacagaggagtgaaggagagagggctgcatgtg
gtctcccagtgctggctacaggcttgtgctgacgagcagagacatgtccccgagtctctc
tatcctttcacctacaaccccaagatgagcctgaacctcagccaggtgcccaacagctct
cagagatctccacctttaacacgaacccaacgcaaagacgccactgacgcaaaggacgac
aagagtgaacatgttgccacagaagaagccacaactttacgtcgtgtaagtgatggaagc
gtcgatcgggaagagatgaatgataatgcagataaaagtgatatttcagagactctagaa
atgagagagaacctacagaggcagctccaggagatcatgtcggccaccaagctgacgaca
gggaggcgtacctcagtcagactcagcaggatgggatcaggaggggccgactcgggcccc
aacacacctgatgggagccgggtcggacgctgcgggagcagacgaactctggaagctctc
agggtttccagagaagcagccatggacttcaacacagagccatctcagagtgaacagatc
gtttgggacgaccctacagccagggaggagagagccaagctggctgataacctacagtgg
cctgggagtccctcacaacactctgagcccttcgcacctccacctcctcccaccgcagaa
aacggccctcagttcagggactccatgacggactcagagctagtggagatggctgcttgt
gaagtcattgaccagcatatgggtccgagaatcacaacgcccctgacagagaggcgagaa
aatgacctccttactcctgaagccccgagcatcgccttccctctcgccaaacctgcagta
gcaccggagccacaggagaagcgtgaggaagaaaagcagccacccagatttcagctgtcc
tccctcagccctcaggagcgcattgattacagtcacctcatagaggagcttggtggtgtt
gtcctcgacaagcagtctttcgaccccagctgttcacacatcatcgtagggactcctctg
cgcaacgagaagtacctggcagcgatggcggcgggcaaatggatcctgcaccgctcatac
ctggaggcctgccgctctgttggacgctttatcccggaggaggagtatgagtggggcagt
agctccattctggatgcgttgccctccatcacctcccagcagaggaggctggcgttagct
gccatgcgctggagaaaagcactgcagggacactctgagcaagggggagccttcagtggg
tggactgtcatgctgaacatcgaccagagcagagaatcaggcttcaggcggttactgcag
tctggcagggcgaaggtcctgccgagtccctccccgtccttgtacaaggaggccactcac
ctgtttgcagacttcagtcggctgaagcctggagacttcagagtcgatgtatctgaagct
acctctcatggagtcacgtgcctaaaaccagagtacatcgcagactacctcatgcaggag
ccgaccccgcccatcgagctgtactacctgactgaagctccctctgaagaaactccagac
actccgtcacgtaagcgcaaagcagccccagacaactccaggctgaaaaagacacgtctg
acctga
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