Epinephelus fuscoguttatus (brown-marbled grouper): 125881812
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Entry
125881812 CDS
T08419
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125881812 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125881812 (smarcd3b)
03036 Chromosome and associated proteins [BR:
efo03036
]
125881812 (smarcd3b)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125881812 (smarcd3b)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125881812 (smarcd3b)
PBAF complex
125881812 (smarcd3b)
GBAF(ncBAF) complex
125881812 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Ribosomal_uS5m_N
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
125881812
NCBI-ProteinID:
XP_049421129
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All DBs
Position
LG21:complement(16015423..16071697)
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AA seq
517 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQAVQNRARKKPVGFPGANEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLD
PRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERR
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcaaggatgccccaccaggga
gctccaatgggcccccccggcccaccgtacggagggagcccggcggtgcggcccggcctg
ccctccccggtgatggagcccagtcgcaagagacctgccccctcccagcaggtccagcag
cagcagcagcagcaacagcagcagcagcagcagcaggccgtccagaaccgggccagaaag
aagccagtcggattccccggagccaatgagatgccggcgaggcagatggacatgagagag
ccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggattcgtgagctggtacctgagtctcaggcctacatggatctgctggcg
tttgagcgcaaactggaccagaccatcatgcgcaaacgtgttgacatccaggaagcattg
aagagaccaatgaagcagcagaagcgtaaactgaggctttacatatcaaacaccttcaac
cctgccagacctgatgcagatgactcagatggcagcattgcatcgtgggagctgcgagta
gaggggaagttgctggatgacccggggaagcagaagaagaagttctcttcattttttaag
agcctggtgatcgagctggacaaagacctctacggtcctgacaaccacctggttgagtgg
caccgcacgcccaccactcaggagacggacggcttccaggtgaaaaggccgggagacgta
agcgtgcgctgcactctgctgctgatgctggactaccagcctccccagtttaagctggac
cctcgcctggctcgcctgcttggcattcacactcagactcgctcctgcatcatccaggcc
ctctggcagtacgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaac
tgtgacaagtacttccaacagatctttgactgtcctcggctgaagttctctgagatccct
cagcgtctcaccaacctcctcttaccccccgaccccatcgtcatcaaccatgtcatcagc
gtggatcccaacgaccagaagaaaacggcctgctacgacatcgacgtggaggtggaagac
cccctgaaaggtcagatgagcagcttcctcctctccaccgccaaccagcaggagattgcc
tcgcttgacaacaagatccatgagaccatcgagtccatcaaccagctgaagatccagagg
gacttcatgctcagtttctccagagatcccaagggctacatccaggactggctcaaatcc
cagagccgagaccttaagttaatgacagacgtggtggggaaccctgaggaggagaggagg
gcggcgttttaccacgagccctggtcccaggaggctgtcagccgctatttctactgcaag
atccagcagaggagacaggagctggaacaggccttagctgtccgcaacacctaa
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