KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125882165
Entry
125882165         CDS       T08419                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04144  Endocytosis
efo04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:efo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125882165 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    125882165 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:efo04131]
    125882165 (chmp4c)
   03400 DNA repair and recombination proteins [BR:efo03400]
    125882165 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:efo04147]
    125882165 (chmp4c)
Membrane trafficking [BR:efo04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    125882165 (chmp4c)
DNA repair and recombination proteins [BR:efo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125882165 (chmp4c)
Exosome [BR:efo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125882165 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   125882165 (chmp4c)
SSDB
Motif
Pfam: Snf7 DUF155 Olduvai Phage_TAC_15 DUF6437
Other DBs
NCBI-GeneID: 125882165
NCBI-ProteinID: XP_049421825
LinkDB
Position
LG21:17474601..17477378
AA seq 224 aa
MSGFAKLFKGSSSSKHHRSKGGPSPQEAIHKLRETEEMLTKKQDYLEKRIEQELAIAKKH
GTKNKRAALQALKRKKRLEQQLTQIDGTLSTIEFQREALENSHTNTEVLKNMGYAAKAMK
KVHDNMDINKIDDLMQDITEQQDVAREISEAISGPFGEAYDEDELLAELEELEQEDLEES
LKSVDDLPSVPSSKLPSARPSHRATTKKRVEDDDDMRMLASWGT
NT seq 675 nt   +upstreamnt  +downstreamnt
atgagcggtttcgcaaaattattcaaggggagctcgagctccaaacaccaccggtcgaag
ggaggaccctcaccccaagaggccatccacaaactccgggaaacagaggaaatgttgacg
aagaaacaggactacctggagaaaaggatagagcaggaacttgctatagccaagaagcat
ggcacgaaaaacaagcgagctgccctgcaggccttgaagaggaagaagcgcttggagcag
cagctcacgcagatcgatggcacgctctccaccatcgagttccagagggaagctttggag
aactcgcacaccaacacagaggtcctgaagaacatgggctacgctgccaaggccatgaag
aaggtccacgacaacatggacattaacaagatagacgatctgatgcaggatatcacagag
cagcaggacgtggcccgagagatcagtgaggccatctccggaccttttggcgaggcatat
gacgaggacgagctgctggcagagctggaagagctggaacaggaagacctcgaggaaagc
ttgaagagtgtggacgacctacccagcgtgcccagttccaaactgccttcagccaggccc
agtcatcgcgcaacaaccaagaaaagggttgaagacgatgacgacatgcgtatgctggct
tcatggggaacttaa

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