Epinephelus fuscoguttatus (brown-marbled grouper): 125882169
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Entry
125882169 CDS
T08419
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
efo04990
]
125882169 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
efo04990
]
Other domain-containing proteins
Patched domain-containing proteins
125882169 (ptchd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
125882169
NCBI-ProteinID:
XP_049421830
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All DBs
Position
LG21:complement(12355034..12379548)
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AA seq
989 aa
AA seq
DB search
MLGSAPGLSGRWERLEPRPRARMLRQVLHAGLRTSFHALGRFVAGHPVFFASAPVLLSIL
LGASFSRYRVEEDVESLLAPKHSLAKIEGNLVDSLFPVNRSKHALYSDLQTPGRYGRVIV
TTRKGSVLDPVHLDTILKLHRRIYQMQVTVPATGVNSFNYSFSYLCLPDDKNVCIIDDII
RAMEEIQSARTSNRSIPNLRYPITQLADGRQAYIGHQLGGVQGWGPSGAVRGPGTGARGE
GVRSARALQLTYYLQARGGLMDRVASQWEKAFCAELQHFAALHPKLGLYPSTSSSLRTDF
QFSSVLARRPLLASLGACGVLAVLCCSMRDCVRSKPWLGLLALLSITLSGLTAAGILNLT
GATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTML
HLMTLGLAASPLTNMEAVRLFCRTAALAVTISYVYTLSFYSSCLVFTGYLETGYRHGCFC
RRVPKPDRLDSKPAWYRCLMYTRYQDEAQTTNPPHGVGHSHAHTPNSNLTHTHAHPHPHP
HPPHTVNNPAAHGHSHVANSTHTHPLPHTHSTANTDPHPQDSHLLLGCVRRCYGDWITNT
YVKPFVVLLYLVYISFGLMGFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYSPVIGF
YIYESAPYWNASVQRDLLEYAKGFQRISWLEAYLNYLSDRNQSTSQPRENFTHTLRHSFL
REPQFAHFTDDIIFAERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRV
RFLIFNPSFVYLDRYAAAVSSPLRHSLLAVLFLLGLSSLAVVEPLVSVWLGLTLLSVQFG
VLGFMTLWGVELDCMSVLCLISALGHSADCSGPLLCGFASGRGDSRTRWVRVALERHGVP
SLQTLICYSAALVPVGSIRSNLTRTLFRCLTLTAGCSALHTLAFLPTLLTFLPPSKSRGH
RPDGEGQRQEVECVEMNDSTRVVDQITTV
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcagtgctccggggctttccggtcggtgggagaggctcgagccgcggccgcgc
gctaggatgctgcgccaggtgttgcacgcgggcctgaggacctccttccacgcgcttggc
cggttcgtggctggccacccggtgttcttcgcctcggcgcccgtgctcctgtccatcttg
ctaggtgccagcttcagccggtaccgcgtggaggaggacgtggagagcctgctcgcgccc
aagcacagcctggccaagatagagggcaacctggtggatagcctgttccccgtgaaccgc
tccaagcacgcgctctactccgacctgcaaacgccgggccgctacgggcgcgtgatcgtc
accacccgaaaggggagcgtgctggacccggttcatctggacaccatactaaagctccac
aggcggatctaccagatgcaggtgacggtcccagccacaggcgtcaacagcttcaactac
tccttctcctacctctgtctccctgacgacaagaatgtctgcatcatcgatgacatcatc
cgcgcaatggaggagatccagtcagctcgcacctccaaccgctccatcccaaacctgcgg
tacccgattacgcagctggctgatggacggcaggcgtacattggccaccagctaggtggc
gtgcagggctggggtcccagtggggcggtgcgaggtccggggacaggagccaggggagaa
ggtgtgcgttctgccagggcgttgcagctcacctactacctccaagcccgcggcggcctg
atggaccgggtggccagccaatgggaaaaggccttctgtgctgagttacagcactttgca
gcgttgcaccctaagctggggctgtatccctctacttcctcatctctgaggacagacttt
cagttctcttctgtgctggcacgccgccccctgttggccagcttgggggcgtgcggggtg
ctggctgtcctctgctgctccatgagggactgtgtgaggtctaaaccctggttgggactg
ctggctctgctgtcaatcacactgtcaggcctcactgctgctgggatactcaacctgacc
ggggccacctacaactctacgtacctgggcatccctttcgtcatgcttggtcatgggctc
ttcggttcctttgagatgctgtcatcatggaggcgaacccgggaggaccagcatgtcaaa
gagcgcgtggcgagcgtcttcgaagatgtcatgctgcgtttctccggctccaccatgctc
caccttatgaccctgggcttggctgcctcgccgctcaccaacatggaagctgtccggctt
ttctgccgcaccgccgccttggctgtcaccatcagctatgtttacacgttgtccttctac
agttcctgtctggtgttcactggatacttagagaccggttacagacatggctgcttctgc
cggcgggtccccaaaccggaccggctggactctaaaccagcctggtacaggtgtctcatg
tacactcgctaccaagatgaagctcagacaaccaacccgccacatggggtcggtcacagt
cacgctcacactccgaactctaacctcactcacacacatgctcacccacacccacaccca
caccccccacacacggtgaacaaccctgccgcgcatggacacagccatgtggctaactcc
acacacacacatccacttccacacacacattccacggctaacacagaccctcatcctcag
gactcgcaccttttgctggggtgtgtgaggcgttgctatggagactggatcactaacacc
tatgtcaaaccctttgtggtcctgctgtatctggtttacatctcctttggactgatgggc
ttcctgcaggtgacccagggttcagaccccagtgcactggttgccatggacacagcaaca
gtattgtatacccgtgcccagcagcgttacttcagctcatattcccctgtcattggattt
tacatctatgaaagcgccccctactggaatgcctcagtgcagcgggacctgctggaatat
gccaaaggcttccagcgaatcagctggctggaagcttacctgaactacctgtcagatcgc
aaccagtccaccagccagccacgggaaaacttcacccacacactccgccactccttcctc
cgcgagccacagtttgcccacttcactgatgacatcatatttgcagagcgcggtcagggc
gaggagccagacgtggcagcttcccgaatcttcttggtggccaagacgacggagaacaag
cgggaggagatgtcagtgctgcttgacaccctgcgacggctgtcactgacctcacgtgtc
cgctttctaatctttaacccttccttcgtctacctggaccgttacgctgcagcggtcagc
tcccccctcagacactcactgctggcggtgcttttcctgttgggtctgtcctcgctggcc
gtcgtagagccgctggtctctgtgtggctgggcctcaccctgctctccgtccagttcggg
gtgctgggcttcatgaccttgtggggcgtggagctggactgcatgtctgtgttgtgtctg
atctcagctttggggcactcagcggactgcagcggtcccctcctctgcggtttcgcctcg
ggtcggggtgacagcaggactcgctgggtgagggtggcgctggagagacacggggtgccc
tctctacagacgctcatctgctacagcgccgccttggtgcctgttggctctatacgctcc
aacctcacgcgcacactgttccgctgcctcaccctcacggccggatgctcggccctgcac
acgcttgcgttcctgcccaccctcctcaccttcctgcctccctccaagagccggggacac
cggcctgacggagaggggcagaggcaggaggtggagtgtgttgaaatgaatgacagcact
agagtggttgaccagatcaccaccgtgtga
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