Epinephelus fuscoguttatus (brown-marbled grouper): 125882562
Help
Entry
125882562 CDS
T08419
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125882562 (pdzrn4)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125882562 (pdzrn4)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
125882562 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
125882562
NCBI-ProteinID:
XP_049422292
LinkDB
All DBs
Position
LG22:19007376..19058137
Genome browser
AA seq
816 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRNFSKVDHEEAVVEAIRRDPIVVQVLRRTPTRAT
AAVAHNHSGTPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNTPAEVERTEEYEYEEVELCRQNSQEKLGLTLCYRTDDEEDTGIYVS
QVEPNSIAARDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSIVLLVTRPEIQLEEE
VWLDDEQQELVEELKMEILEERRRQKERNFDRGDEYLAEEEMTTDTATCSSNNQDKDSGF
GRSTDSPEHQPLLARLHRRTPAHCLRERWRAEHPHTRRGTVVPQDTQSPRTLSKGQGHEG
VSIRNGGGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSVTEQGVDGDSVDSVG
GGNGVEQELRMLNEELRSIELECQSIMQAHQLRQSHQMEPSEPVSSSPGRSPKDGHKRHG
RLADIHEYPERSDSDRIREKDSSSAYNTAESARSTPLGMERSPDHSLQRQISITNQKNLR
LASSTPSSPIPIPKPQGRSRPADPGPVISSSPDQSNPSRSESDPALPADDERCEKKGRAR
DSRRGLSYGSYQTTPYQGQGASRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPAHRSGR
PGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRY
WSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGAEGRKEVNILELSHKKMMKKRN
KKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtatgag
attgcacaggtgaacgggcgcaacttctccaaagtcgaccatgaggaggcagtggtggag
gccatcaggcgagacccaatcgttgtccaggttctgcggcgaacccccaccagagccaca
gccgctgttgcacacaaccacagtggcacaccacaggacgtgtgtgtggtggatgtttgc
acgcaaacggacatcaccttcgagcacatcatggcactggcgaagcttcggcctgctact
ccgcccgtccctgacatctgtcccttccttttgtctgacagttgtcattccatccacacc
atggagcatgagttttatgaatgtccagagtacctgtccaatactccagcagaggtggag
agaactgaagagtatgagtatgaggaagtggagctgtgcaggcagaacagccaggagaag
cttggcttgacgctgtgctacaggaccgacgatgaggaggacaccggcatttatgtcagc
caggtggagccaaacagcatagcagcgagagacggacgcatcaaggaaggagatcgtatt
ctacagataaatggctgtgaagtgcaagacagagagaaagctgttgccttgttgtcaagt
gaagaagcgaggagcatcgtgctactggtgacaagaccagaaatccagctggaggaggag
gtatggctggatgatgagcaacaggagctggtggaggagctgaagatggagattctggag
gagaggaggaggcagaaggaacgtaactttgacaggggggatgagtatctagctgaagaa
gagatgacgacagacaccgctacctgttcctcaaacaatcaagacaaagacagtgggttt
ggacgcagtacagacagtccagagcaccaacccctgctggctagactgcacaggaggacc
ccagcccattgcctgagggagcgatggagggcagagcatccacacacaagacgagggact
gtagtgccacaggacacgcagagtccgaggacattgtcaaaaggccaaggccatgaaggg
gtcagtattcgcaatggcggaggcgggatcctaggtttagaaaatcgcttccagcaactc
ttggagctcaagtgccaaatccggaatggaggcgagtgtggggtgtactccatccgacac
agtatagagtgtagtgtcactgagcaaggagtggatggagatagcgtagatagtgttgga
ggagggaatggagtggagcaggagttgaggatgctaaatgaggaactgcgcagcattgag
ctcgagtgccagagcatcatgcaggcgcatcagctccgccagagccaccagatggaacct
tcagaacctgtatccagctcaccaggacggagccccaaagatggacacaagcggcacggc
aggttggccgacatccacgaataccctgagcggtcggacagcgataggatccgagagaag
gacagctccagtgcctacaacacggcagagagtgcacggtcgacaccgctaggtatggag
agatctcctgatcattctctgcagagacaaatcagcatcaccaaccagaaaaacctcaga
ctggcttcctcaacaccctccagccccatcccaatccccaagccccagggtcgtagcaga
ccagcagacccaggccctgttatctccagcagcccagatcagagcaacccttcacggtcc
gagtcagaccctgccctgcctgcagacgatgaaaggtgtgagaagaaagggagggccaga
gactccaggagggggctgtcctatggttcgtatcagacaactccctatcaaggccaggga
gcatccaggcaactgcagagttacatgcagctgctacaacagcactcatccctggagtat
tcccagagccagctgagtctgctcagtgtctgtcgagatcccgcgcaccggagtggacgc
cctggggaaccccgtctggagtggaaggtcaaagttcgggctgacggcacacgctatgtg
gcccggaggcctgctcgtgaccgaatcctgagggagcgggcgctaaggatcagagaggag
aggagcggaggcatgactacagatgacgatgctatgagtgagatgaaaatgggccgctac
tggagcaaagaggagcggaagcagcatttggcgcgggctagggagcaaaggaagagaagg
gagttcatgcaaaagagccgccttgaatgtttaaaggaggggccagctagcggagcagag
ggcaggaaggaggtcaatatcttggagctcagtcacaaaaagatgatgaagaaacgaaac
aaaaagatcctggataactggatgaccatccaggagctgatgagccatggggcaagagtc
ccagagggctccaaagtacataacgccttcctgtctgtcacaactgtctag
DBGET
integrated database retrieval system
