Epinephelus fuscoguttatus (brown-marbled grouper): 125882712
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Entry
125882712 CDS
T08419
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04150
mTOR signaling pathway
efo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125882712 (lrp6)
04150 mTOR signaling pathway
125882712 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125882712 (lrp6)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125882712 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
125882712
NCBI-ProteinID:
XP_049422504
LinkDB
All DBs
Position
LG22:4194080..4258127
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AA seq
1622 aa
AA seq
DB search
MGVVLRSLLLCSFCFLIRGVPLLLYANRRDLRLVDAAHEKTNATIVVGGLEDAAAVDYVY
SQGLIYWSDVSEEAIKRTVFNLSGASAVQTVVPGLASPDGLACDWLGSKLYWTDSETNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGYMYWTDWGEIPKIERAGMDGTNRSMIINK
EIYWPNGLTLDYSQEKLYWADAKHNFIHRSNLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKETGAEQRIVHSDIFSPMDIHVFSAKRQNILASSPCSVKNGGCSHLCL
LSPLKPFFQCACPTGVQLLEDGKTCRDGATQMLLLARRTDLRRISLDMPDFTDIILQVDD
IRHAIAIDYDPVEGYIYWTDDDVKAIRRSLLDGSDAQFVVTSQVNHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDG
MERQVMVNTSLGWPNGLALDYEERKLYWGDAKTDKIEVMNMDGTGRRVLVETNLPHIFGF
TLLGDFIYWTDWQRRSIERVHKRTAEREVIIDQLPDLMGLKATNVHKSFGTNLCAENNGG
CSHLCLYKPQGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPL
TGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGSGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHPFGL
TQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNG
HCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKTAINRMVIDEQQSPDII
LPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSSSLGGPSQGLQLYD
LSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLE
RSPKIERAALDGTEREVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLSGANRIV
IADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHELD
MREYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCTS
GEVDCIPQAWRCDGYPECDDSSDEEDCPVCSETEFQCDSRQCIDQSLRCNGEINCQDRSD
ENKCEVRCPPDQFTCSNGQCIGKHKKCDHNMDCTDNSDEIGCYPTEEPPPPSNNTIGSIV
GVVMALFVVGAVYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSLPG
MSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQY
TMEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSSAAASAT
AGKGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTD
SS
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgtgctgcggagcctgttgttgtgtagtttttgttttctcatacgaggcgtg
ccgctgctgctatatgcaaaccggcgagaccttcggctcgtggatgcggcacacgagaag
accaacgccacgatagtggtgggggggctggaggatgctgctgccgtggactacgtttac
tcccagggcctcatctactggagcgatgtgagcgaggaggccatcaaacgcaccgtcttc
aacctgtcgggggccagcgcggtccagacggtggtcccaggtctggcctccccagatgga
ctggcctgtgattggttagggagcaaactttattggacggactcggaaaccaatcggatc
gaggtggcggagctcgatgggtccttgaggaaagttttgttttggcaggagctggaccag
ccgagggccatcgctctggatccagaacgagggtacatgtactggacagactggggtgag
atcccaaagattgagcgggcagggatggacgggacgaatcgctccatgatcatcaataaa
gagatctactggcccaacggtctgacactggactacagccaggagaaactgtactgggcc
gacgccaaacacaactttatccaccgatccaacctggacggatcctccagggaggttgtg
gttaaaggggagctgcctcacccgttcgccctcaccctgtacgaggacacactgttctgg
accgactggaacacccactccatccactcctgcaggaaagagaccggagccgagcaacgc
atcgtccactccgacatcttctcaccaatggacatccacgtcttcagcgccaagagacaa
aacatcttagcgagcagtccgtgctcggtgaagaacggaggatgttcccacctctgtctc
ctctctccgctgaagcccttctttcagtgtgcatgtcccacaggagtccagctgctggag
gacgggaagacctgcagagacggtgccactcagatgctgctgttagctcggcgaacggac
ctgcggcgcatctctctggacatgccggacttcaccgacatcatcctgcaggtggacgac
atccgccacgccatcgccatcgactacgaccctgtggagggatacatctactggacggac
gacgacgtgaaggccatccgccgctccctgctggacggcagcgacgcccagtttgtggtc
acgtctcaggtgaaccaccctgatggcattgctgtggactggatcgccagaaacctgtac
tggaccgacacggggactgatcgtatcgaggtgacccgactcaacgggaccatgcgcaag
atcctgatctctgaagacctggacgagcccagagccatcgtcctggacccagtggctggt
tacatgtactggaccgactggggcgaggtgccaaagatcgagcgggctgacctggacggt
atggagcggcaggtgatggtcaacacatctctgggctggcccaacggcctcgccctcgac
tacgaagaacgcaaactctactggggagacgccaagacggataagatcgaggtgatgaac
atggacgggacggggcgacgggtgctggtggagaccaacctcccccacatcttcggcttc
actctgctgggcgacttcatctactggaccgactggcagcgccgcagtatcgagcgcgtc
cacaaacgcactgcggagagagaggtcatcatcgaccagctgcctgacctcatgggcctc
aaggccacaaatgtgcacaagtccttcggtacgaacctgtgtgcggagaacaacggcggc
tgcagtcacctgtgtctctacaagcctcagggcgtccagtgtggctgtcccatcggcctg
gagctcatcgccgacatgaggacctgcatcgtccccgaggccttcctgctcttctcccgc
cacaccgacatccgccgcatctccctggagaccaacaacaacaacgtggccatcccgctc
accggcgtcaaggaggcctcggcgctcgacttcgacgtcaccgacaaccggatctactgg
accgacatcactctgaagaccatcagtcgggcgtttatgaacggcagcgctctggagcac
gtggtggagttcggtctggactaccctgaggggatggcggtggactggctggggaagaac
ctgtactgggccgacaccggcaccaaccgcatcgaggtggccaaactagacgggcagcac
cggcaggtcctagtctggaaggatctggacagtccgcgagctctggctctggatcccgct
gaagggtacatgtactggaccgagtggggcgggaagccaaagatcgaccgagcagcgatg
gacgggtcgggtcggatcactctggtggcggacgtgggccgagccaacggactcaccatc
gactacgcagagcgccgcctctactggactgacctcgacaccacgctcatcgaatcctcc
aacatgctcggtcaggaccgtgaggtgatagccgacgacctcccccaccccttcggcctc
acccagtaccaggactacatctactggaccgactggagccagcgcagcatcgagcgagcc
aacaagaccagcggtcagaaccgcaccgtcatccagggccacctggactacgtcatggac
atcctggtgtttcactcgtccagacagggcggctggaacgcctgcgcctctaccaatggg
cactgttcacacctctgcctcgccgtccccgtcagcagcttcgtctgtggctgccccgcc
cacttctctctcaactacgacaacaagacgtgcagcgctccaacttccttcctgctgttc
agccagaaaacagccatcaaccgtatggtgatcgacgagcagcagagtccagacatcatc
ctgccgatccacagcctgaggaacgtccgagccatcgactacgacccgctggacaaacag
ctttactggatcgactccaagcagaacgtcatccgccgcgctcaggaggacggcaaccag
agtatgacagtggtgtcgagctctctgggcggacccagccagggtctgcagctgtacgac
ctgagcatcgacatctacagccgcttcatctactggaccagcgaggtcaccaacgtcatc
aacgtcacccggacggacggcagcagggtcggtgtggtgctgagaggagagcacgacaaa
cccagagccatcgtggtcaacccagagagagggtacatgtacttcacgaacctgctggag
cgctctccgaagatcgagcgggcggcgctggacgggacggagcgtgaggtgttgttcttc
agcggtttggggaaacctgtcgctctggccatcgataacgaggtggggaagctgttctgg
gtcgactcggacctgcggcgcattgagagcagcgacctctccggagccaatcggatcgtg
atcgccgactccaacatcctgcagccggtgggtctgacagtgttcgggaaccacctgtac
tggatcgacaagcagcagcagatgatcgaacgcatcgacaagacgacgagggagggacgc
accaagatccaggctcgcatcgcctacctgagcgacatccacgccgtacacgagctggac
atgagggaatacagtaaacacccgtgtacctgggacaacggcggctgctcccacatctgc
atcgtgaagggagacgggacgactcgctgctcgtgtcccgtccacctggtgctgctgcag
gacgagctctcctgtggagagcctcccacctgctccccggagcagttctcctgtacctcc
ggtgaggtggactgcatccctcaggcctggaggtgcgacggttaccccgagtgtgacgac
agcagcgatgaggaggactgtcccgtctgctccgagaccgagttccagtgcgacagccgg
cagtgcatcgaccagagcctgcgctgcaacggagagatcaactgtcaggaccgctccgac
gagaacaagtgtgaagtacgttgtcctccagaccagttcacctgctctaatggtcagtgc
atcggtaaacacaagaagtgcgaccacaacatggactgtactgacaactctgacgagatc
ggctgctatcctacagaggagcctcctcctccgtccaacaacaccatcggctccatcgtg
ggcgtcgtcatggcgctgttcgtggtgggcgccgtgtacttcgtgtgtcagcgcgtcctc
tgcccgcagatgaaagacgacggcgagacggtcaccaacgactttgtggtccacgggccg
tcgtcagtgccgctgggatacgtgccacatccgagctcgctgtccagctcgctgccaggt
atgtccagagggaagtctgtgattggctccctcagcatcatgggtgggagcagcggacct
ccgtacgaccgagctcacgtgacgggagcttcgtccagcagctcatccagcaccaagggg
acgtacttccctccgatcctgaaccctcctccgtctcctgctacagtccgctctcagtac
actatggagtttggttattcttcaaacagtccctcgacacacagatcctacagctaccgg
ccctacacctaccgccacttcgcccctcccaccaccccctgcagcaccgacgtgtgcgac
agcgactacacgccgggacgccgggcgccgctcaagtccagcgccgctgcctccgccacc
gccggcaagggctacaccagcgacctcaactacgactcggagcctttcccgccgccgccg
acgccccgcagccagtacctgtcggcggaggagaactgcgagagctgcccgccgtcgcct
tacaccgagcgcagctactcccaccacctctacccgccaccaccctcgccctgcacggac
tcctcgtga
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