Epinephelus fuscoguttatus (brown-marbled grouper): 125882782
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Entry
125882782 CDS
T08419
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125882782 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125882782 (exosc1)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125882782 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125882782 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
125882782
NCBI-ProteinID:
XP_049422596
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All DBs
Position
LG3:complement(30592778..30597835)
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AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCSVEDCIPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHSKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaagctatgcagtgtagaagactgcatt
cctggcacaggagtgtatctgcggcatggatacatttactcctcactagcaggatacgtg
ctcaggaaaaacgagggagaggagttgccagtgatctctgtggtgagggaaacagaaaca
caactactaccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaaccccagg
ttcgccaaggtccatatactgtatgtaggctccacaccgctgaaggaccgcttcagagga
acaatcaggaaagaagatgtgcgcgcaacagagaaagacaaggtggagacatacaaaagc
ttcagaccaggtgacatcgtcttggcgaaagttatatcgcttggtgacgtgcagtctaac
tacctgttgacaacagcagagaatgagctgggggtggtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgtgagatgcagtgcccacggacgcacagcaaagag
ttccgtaaagtggcgcgagtgcagccggagtatctacaggcatga
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integrated database retrieval system
