Epinephelus fuscoguttatus (brown-marbled grouper): 125883597
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Entry
125883597 CDS
T08419
Symbol
focad
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125883597 (focad)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125883597 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
125883597
NCBI-ProteinID:
XP_049423970
LinkDB
All DBs
Position
LG23:complement(30325779..30401471)
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AA seq
1807 aa
AA seq
DB search
MTESLKIRFDFPSPVIQAQAVRNLVAAVLKEKGPNGQITQSSTQGSAIEALWEQCCSDCA
LVRSVCCDAVVLLVDQGHADLQYVLNSVLNLLPSARNVQGLIKVIGRLLQMQADQRDRET
HFTCPYSIRSSPHPYITALENRVDCWPALLLEIDDFIQQAADRNEPAHITMLAPFLQYLY
CEPQRQPQYALLRHSLLRVLLPIRPGAGSILQNKDQTQDSAVSDSLLHCLCQLVPHMQVD
SVEAVLELCGFVDTLLQGLVPACEERWRTERAGLLLQLLCACHRCLKLNGDCRPLLSLLQ
QLLRACQQELPLDELLMGVALLLLEVPAAQQTSLLNLALRLVPEQAELSPWLSPVLVLPV
LQLLSCSGLTEPLADRRTHNLNQDLAQSLLRRISRETDKPRQSAPPLALPLSSWYSELGV
ALSTLRKVADDPAAAADWLLSVSSALSSSQSQIRSLALIVTYLIITGQEDVCQLALNASQ
AIAAADPCQVPSLVPVLLFKLGKEKNPGVAHAVLNCLPNLGTHKLCVPMVLQTLHMLASA
PKLRAVAMRLMTALWKKQDRIYPELQRLLGQQDSRVVVGRDAQWEQIVARAACLWDICRE
RPYQHGGDMLAAITLTLNQCTKPDMATPASLALQGLQELCRAEVVDIVSTWRSLGPELSC
DSRPLMVKVIAELLALVPQLTVKSEEYEKLKEEVVSFLWSYAVSKDPEVASCGYRALADF
PETVHTINLLPEAARPDTKDEDEQDEQGKEKEEEEKDLSIPGSSYVKLLALIPLSVLPAL
ELFLTSLVKQEMSQMPRGVYFSALRGGNLRSDQGKTMAGIPLFMLKTYENNKQPGLKPGL
AAGLLLCYELPVQTDRDGRPIDRFLISRSRSYQHTLAALIHEVNIQPSEWHRALFLPQAW
RGFMSRAFHAVLQGRRADLQMQQKQGKENPEELQYKQHCAWLWARDHLADAIKAATKDSP
VVQGNSILALSGLAAVLAKYESNLPADSDGSLTAGPEFVPTATWLAVVLNTLLSISSSSY
KARGQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLVQVLSALQAGLP
GSPTADDSQAVQFHSGLALGMVLSSLHHQRLSDVSVEKDADLLLSSLDALQSCSFNPNLE
YNTGCVLGLGLVLAALCSSGQTDQHVHVTQTLDKLLSSLQDSSGLGRMQQEVLAYSVACV
GVSAFSGGLIDAAKAEEIMNTLRTLTEESQQTPGFSLALGLVVHGLSMSGHGKAEDIQPR
LLAAWIKILLAEGCPTMQRLAAINGLVALVGSESYLIQQTSELELSSQQQSRLNEVIRAI
TQIITFSGAIGLQSNSACLVGHLHLAHMSTSHSHTAVPQDFSYLSERSVIRSIIDFITEA
GKKGPEHSPPALVKTALTPLASVGASFQYPPINWSAVLSPLMRLSFGEDVQHQCVVLAAC
QAQSSQSASLFLGSWLSPPLVHSLSYHTRAHLYENLGLWMKHVAEDKLQVYMESLGLQQF
QEDLRPQRLSLCHSVLQGLAQAMALPNPPNNCWSILCSTSEKIFTLLPNHIQDNEVDLYV
GITKCLSEMSDAEIDRITRVTETQMEKTCFVLAYLTSQGRVPLLGLNDVIAGVLRGWPSS
RVGWLLLQTFYQCRLATNPNTGVLKRMEWHLELMGHIRNIAYGATSVACGDTKLATDFLF
QIFSAAVVSWGDHFMPLLLGIRAQWFPWQPNSKPQTLQHSLYGEEAFTERALPQCLLGMP
HSLSLLLDKKPWSSQTDKFIDWLFSITEGPEQSLSASTISTAKAALLALKSSTEFKKKAV
WTRAYGW
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagtctgaagattcgttttgatttccccagccctgtcatacaagcacaggcg
gtgagaaatcttgttgctgctgtgttgaaggagaaagggccaaatggacaaatcacacag
tcctccacccagggttcagcaatagaggctctgtgggagcagtgctgcagtgactgtgca
ctggtgcgttcagtctgctgtgatgccgtggtgctgctggtggatcaaggccacgcagac
ctgcaatatgtcctcaatagtgtcctcaacctcctgccctctgccaggaacgtccagggg
ctgataaaggtcattggacggctgctacagatgcaggcagaccagagagacagagagaca
cacttcacctgtccctactccatcaggagcagcccccacccatacatcaccgcgctggag
aaccgcgtggactgctggccagctctgctgctggagattgatgacttcatccagcaggct
gctgacagaaatgaaccagcccacatcaccatgctggcccccttcctgcagtacctctac
tgtgaacctcagaggcaaccccaatacgccctcctgcggcacagtctcctcagggtgctg
ctgcccatacgaccaggagctggatcaatcctccagaacaaggaccagacgcaggactcc
gcagtgtctgacagcctgctacactgcctctgtcagctggtgccacacatgcaggtggac
agtgtggaggcggtgctggagctgtgtggatttgtagatacactgcttcagggtctggtc
ccagcctgtgaggagcgctggaggactgagagagccgggctgcttctgcagctgctttgt
gcctgccatcgctgcctcaagttaaatggagactgccgacctcttctcagcttattacag
cagctcctacgtgcctgtcaacaggagctgccattggacgagctgctgatgggcgtggcc
ctgctcctgttagaggtccctgctgctcagcagaccagcctcctcaatctggcactgaga
ttagtccctgagcaggctgagctgtcgccctggttgagtccagtcctggttcttcccgtg
ctgcaacttctgtcctgctcgggcctcaccgagccgctggctgaccgacggacacacaac
ctcaaccaggacttggcccagagcttgctccgccgcatcagcagagagacagacaaaccc
cgacagtctgctccaccgctggcacttcctctcagctcctggtacagcgagctcggtgtg
gctctatccacgctgcgtaaagtggcagatgatccagcagcagcagccgattggctgctg
tcggtcagctcggccctgtcgtccagccagagccaaatccgctccctcgccctcattgtg
acctatctcatcattacgggtcaggaagacgtctgccagctggctctgaatgcgagccag
gccatcgctgcagccgacccctgccaggtcccttcccttgttcctgtgctgctgttcaaa
ctggggaaggaaaagaatccaggcgtggctcacgctgtgctcaactgcctgccaaacctc
ggcactcataagctctgtgtccccatggtgctacagactctgcacatgctggccagcgcc
cccaagctgagagcagtggcaatgcgcctcatgacagctctttggaagaaacaggatcgt
atctacccagagctgcagcgtctgctgggacagcaggatagtagggtggtggtggggagg
gatgcccagtgggagcagattgtggccagggccgcctgtctctgggacatctgtagagag
aggccttaccaacatggaggcgacatgttggctgccattacgctcactctgaaccagtgc
accaaaccagacatggcaacccctgcttccctcgcccttcaaggactacaggagctgtgc
cgggcagaggtagtagacatcgtgtcaacatggagaagtctggggcccgagctgagctgt
gactcccgtccactgatggtcaaagtcatagccgaacttctggctttggttccccagctc
actgtcaagtcagaggagtatgagaaactgaaagaggaggtggtcagcttcttgtggagt
tatgctgtgagcaaggatccagaggtcgccagctgtggctacagagctttggcagatttt
cctgaaacagtccacacaataaatcttcttccagaggcggccagaccagatacaaaggat
gaggatgagcaggatgaacaagggaaggagaaagaggaagaagaaaaggatctctctatc
ccaggttcatcttatgtgaaactgctggctctcatccccctatctgttctgccagccttg
gagctcttcctgacctcactggtgaagcaggagatgagccagatgccacggggggtgtac
ttctctgccctgaggggggggaacctgcgttcagaccaggggaaaaccatggcaggaatt
ccattattcatgctgaagacctacgagaacaacaaacagcctgggctgaagccgggacta
gcagctggactgctcctctgttacgagctgcctgtgcagacggatcgtgacggcagacca
atcgatcgtttcctcatcagccgcagtcgcagctaccagcacaccctggcagccctcatt
catgaagtgaacattcagccatctgagtggcaccgcgctctcttcctgccacaggcctgg
cgaggtttcatgagccgagctttccacgctgtcctacagggccgacgtgctgatttacag
atgcagcagaaacaaggcaaagagaacccagaggagctacagtacaaacaacactgtgcc
tggctttgggccagagatcacctggcagatgccatcaaggctgctacaaaggacagtcct
gttgttcagggaaactccatcttggctctgagcggcctggctgctgtcctagctaaatat
gagagcaacctgcctgctgacagtgacggcagcctcacggcaggaccagaatttgtgccc
acagccacctggttggccgtggttctcaacaccctgctcagcatcagcagcagcagctac
aaggcccgaggacaagttttcccatggttcctacatcgttcttactcaggtgagaacaca
gccagtgccatagctcgctcctgcgccagcctggccttgtccctgcttgtccccgtgctg
gtggtgtggcagagggatggtctggtacaggtcctgtcagcgttgcaggctggcctgccg
ggttcccccaccgctgacgactcccaggctgtccagttccactctggcctggcgcttggc
atggtgctgtccagcctgcaccaccaacgcctcagtgatgtctctgttgagaaggatgct
gatctccttctcagctctctggatgctctccaaagctgctctttcaaccccaacctggaa
tacaataccggctgtgtgttaggtctgggtctggtgctcgcagctctctgcagcagcgga
cagacagaccaacatgtccacgtcacccaaacactagacaaactactgtccagcctgcag
gacagcagtgggctgggacgcatgcagcaggaggtcttggcgtactctgtggcgtgtgtg
ggtgtctcagccttcagcggaggccttatagatgctgccaaggctgaggagatcatgaac
actctgcgcaccctgactgaggagagccaacagactccaggcttctccctggctctgggg
ttggtggtccatggcctgtcaatgtccggccatggtaaagcagaggacatccagcctcgt
ctgctggctgcttggatcaagatcttattggctgagggctgtcccactatgcagcgcctg
gctgccattaacggcctggtggctttagtaggatctgagagttacctcattcagcaaaca
agtgagttggagctttcctcccagcagcagagcaggctgaatgaggttattcgagccatc
acacagatcataacattctcaggagccattggtctgcagtccaacagtgcttgtctggtt
ggtcatctgcatttggcccatatgtccaccagtcacagtcacacagcagttcctcaggat
ttcagttatctctcagagagaagtgtcatcagatccatcattgacttcatcacagaggca
ggaaaaaaaggtccagagcattcccctccagctctggttaagactgctctgaccccactg
gcatcagtcggagccagtttccagtacccacctatcaactggagcgcagtcctatctccc
ctgatgagactcagcttcggagaggatgtacagcatcagtgtgtggtgctggcagcgtgt
caagctcagtcttctcagagtgcctctctctttctgggctcctggctgtcacccccactt
gtgcacagtctcagttaccacactcgggctcacctgtatgagaacctgggcttgtggatg
aagcatgtagctgaagacaagctccaggtctacatggagagtctgggcctgcagcagttc
caggaggaccttcgaccccagcgtctgtccctgtgtcactccgtactgcagggcctcgct
caggccatggctctcccaaacccccccaacaactgctggagcatcctctgctccacctct
gagaagatctttaccctcctgcccaatcacatccaggataatgaagtggatttgtatgtg
ggaatcaccaagtgtctgtctgagatgtctgacgcagagattgaccgaatcacacgagtc
acagagactcagatggagaagacctgctttgtcctggcttacttgacctcccagggcaga
gttcctctcttgggtctcaatgatgtaatcgccggcgtgcttcgcggttggccaagcagc
agagtcggctggctcctcctgcagactttttaccagtgtcgcctggccaccaaccccaat
acaggtgtgttgaaacgaatggagtggcatcttgagttgatgggacacatccgaaacatt
gcctatggtgcaacctccgtcgcatgtggagacaccaaactggccacagacttcctgttc
cagattttttctgctgctgtagtttcctggggtgaccacttcatgcccctcctgcttggc
attagggcccagtggttcccatggcaacccaactccaagccccaaactctgcaacacagt
ctgtacggtgaggaggcattcactgagcgtgccctgccgcagtgcctgctgggaatgccc
cacagtctgagtctgctcctggacaaaaagccctggagcagccagacagacaagttcata
gactggcttttcagcatcacagaaggtcctgaacagagtctgtcggcctcgaccatcagc
acagccaaagctgccctgttggccctgaagtcctccactgaattcaagaagaaagctgtg
tggaccagagcatacggatggtag
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