Epinephelus fuscoguttatus (brown-marbled grouper): 125883851
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Entry
125883851 CDS
T08419
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125883851 (tnrc6c2)
03036 Chromosome and associated proteins [BR:
efo03036
]
125883851 (tnrc6c2)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125883851 (tnrc6c2)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125883851 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
125883851
NCBI-ProteinID:
XP_049424414
LinkDB
All DBs
Position
LG3:37363201..37427307
Genome browser
AA seq
1900 aa
AA seq
DB search
MEEKKKKKQDEKTKTDVAQKKAADQKPKVPEPAPTKPSPGPPHHLHPASPTLPLSSSSSS
GNGKRASSSSQLPTQTPPQQQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLPAGAL
SALTLSSSSSSSSSPSSSYSSCSTTTSSTSPNSATSTASKRHPDISLQSGSIAQYETSHW
GASLPVDSSSSASSWDKVIIDGSDTEAWPSISRSSDPSHPAAPECPLGSASSNADTSAVT
TTSSSSFLSMATGAAGQQAHYPSLKANNNMMTGPGSASTCGNRGWGSDGKQDGMNGGRVG
APNNWGSPNFNLNLNPNANPSAWPVLGHEGGGGCGIGANGVSNSPSLPPGINGNGNMGNG
SLGGADNGGGGWVGMISANENDQQHSSATTSLSFKMEPSNLNTDGPNHTKQQQQAQEPMS
PIHGITGWGGQSPTESSQLNGDTTGSSVWGSGETKAADSPKDSGWDSTPSGNLSAWGRQG
SGGGSSGSGGWGDWGKSSGGGETSKGWDSVDAGSTGSGQEQQLGSWGQQPRTAPASEGSG
DSSESQSGHRDRSSSTDFTPMLPRQDLDPRVLSNTGWGQTPIRQHTVWEMEEANSDDGKS
KSSSDTMGGSSSNGGPSSINGGTINPKIGPSQRPGSGEKSDSEGSSSSGWGAPPPQPIQT
GSGWGDPPQSHSKAPNGTTSGWGDPLPTSGPRNGGTPSWGSEDKSTSWDDGLTKSQPTSW
GEGPKSSHGWGNSNGGSNGSSTGDWGEAEVKNNGSSSSMWEGEGGNGEGGGWKDSPRGGN
RGGGWGKPAPTVSNSSWGETSRANGPVQGGWGSSKPQESSNSSTGSGGGGGMGSWGGPGT
VKQNTSSWGNGSKQDQGMEPTGWEEPSPPSIRRKMEIDDGTSTWGDPGTYNKTVNMWDRN
NPNNNPGNSGPPPTKNGGVIIPNNNNNNHSVGPGNNNHHHTHHMHHHPHPHPHHGQPPTH
LQHHGNNNGSPSNGTPHPGAGPQGRPPLANPGWGELPNVQPKSEPAWGEPAVPTSVDNGT
SAWGKPPGGVGGWGDGGHEPSGPYGRANGPTGSAPCKPGPKPMQDGWGNGGEEMGMSTGQ
WDAEDGDMWNSPTSQESSSSCNSWGNGPKKGPSKGKMGKPDEAWIMNRLIKQLTDMGFPR
DPAEEALKSNNMNLDQAMSALLEKKTDLDKRGMGMSDYNNGMNKPMVCRPSALSKDPSDR
TSFLDKDGVLSDDAPPSPFLPSPSLKLPLANSSLPGQGLGQGNPGLAMQNLNNRQIPSGM
FGSSGAAQTRAMQQQPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPA
LLTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQ
QIQQHQRQLYQALLMKQQQLPSHSSSSSSSSAGLHPPGGPAGGHGSGKSTLDPFTGPHQA
PGLADTLHTKEPPSSPNAYSTYPLSGLNPNMNVNCMEVGGLSVKEPLQPQSRLSQWTHSN
SMDSLSGNSSNMENNLNKHGTCKRNTGAISAASTLGPPGKPPQMEDSYSPYNLMSSSESP
TSPLVPPDSWGQGKSPNEKISNGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSG
PTINTNIHDVNRYLLRDRNGGKLSDMKSTWSPGPISQSQASLSHELWKVPQGPRSNAAPS
RPPPGLTNNKPSSTWGGNSLGLAQGWSGSYSSEGTTWSTDSSNRTSSWLVLRNLTPQIDG
STLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEE
EVNRFFAQGQSLGANTTSWQANPGTNQNRMGGAAQSHSMGQWSSSGGGGGKASGGDLLWG
GVPQYSSLWGPPSGEDARVIGSPTPINTLLPGDLLSGESM
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagacgaaaagaccaagacggacgttgctcagaaa
aaggctgctgatcagaaacccaaagtgccagagcctgctcccactaagcccagtcccggc
ccaccccaccacctccaccccgccagccctacgctgcccctctcctcctcctcttcttct
ggcaatggcaagcgcgcctcctccagtagccaactcccgactcagactccccctcagcag
cagtgccagttgtcctctgccagtgctcgctacccgcccagagaggtgcccccacgcttc
cgccagcaggagcacaagcagctactgaagagaggccagccactgcctgcaggagccctc
agcgctctcaccctctcctcctcctcttcctcctcctcttcgccctcatcatcttactct
tcttgttctacgactaccagcagcacttccccaaactctgccacgtccactgcgagcaaa
cgtcacccagacatatctctccagagtggctccattgcccagtatgagacctctcattgg
ggagcctctttgccagttgacagctcctccagtgccagcagctgggacaaagtgattatt
gacggaagtgacacagaagcttggccctccatcagccgcagcagtgaccccagccaccct
gcagcaccagaatgccccttgggctcagctagctctaacgcagacaccagtgctgtcact
accaccagtagtagtagttttctgagtatggccacaggtgccgcaggccagcaggcccac
tacccctctctcaaagctaacaataacatgatgacgggacctgggtcagccagcacatgc
ggtaatagaggctggggctccgatgggaaacaggatggtatgaatggcggccgagtaggg
gcacccaataactggggctctcccaattttaacttgaacctcaatcccaatgccaaccca
tcagcctggcctgttctgggccatgagggtggtggaggttgtggtattggcgccaatggc
gtgtcaaactccccatccctcccaccaggtattaatggcaatggaaacatgggaaatggg
agccttggaggagcagataatggtgggggaggttgggttggcatgataagtgctaacgaa
aatgatcaacagcactcttcagccaccacaagcttgtcttttaaaatggaaccttctaac
cttaacactgacggaccaaaccacactaagcagcagcagcaagctcaggagcctatgagt
cctatccatgggataactggctggggaggccagtcacccactgaatcatcccagctcaat
ggggacacaacaggcagctctgtatggggtagtggagaaaccaaggcagctgactctccc
aaggactcaggctgggactcaactccctctggaaacctttctgcctggggccgccaaggc
agtggtggaggaagtagtggaagtggtggctggggggactggggaaaatcctctggtggt
ggagaaacatctaaaggttgggactctgtagatgctggtagtactggatcaggccaagag
cagcaacttggctcatggggacagcagcctagaacagccccagcaagtgagggtagtggg
gatagcagtgaaagtcaatctggccacagagacaggtcctccagcacggattttaccccc
atgttaccccggcaggacctggaccctagggtgctgagtaacactggctggggacaaacc
cccatccggcagcacactgtatgggagatggaagaagcaaactctgatgatgggaagagc
aaaagcagctcagacaccatgggaggctccagctctaatggtggaccctcatccatcaat
ggaggtaccatcaacccgaaaattggccccagtcagaggcctgggtctggagaaaaaagt
gacagtgaaggatcatcatcctctggctggggagcccctccacctcagcctatccagact
ggatcaggatggggagaccccccacagtcacacagcaaagcgccaaatggcactaccagt
ggctggggtgaccctttacctaccagtggtcctagaaatggaggcacaccatcctggggc
tctgaggacaagtcaaccagttgggacgatggcctgacgaaaagtcagcctactagctgg
ggagagggtcccaaaagctcccatggatggggcaacagtaatgggggctctaatggttcc
agcacaggggattggggagaggcggaggtcaagaacaatggatcctccagcagcatgtgg
gaaggagaaggagggaatggagaaggtggtggatggaaggacagcccaaggggaggaaat
agaggaggaggctggggtaaacccgctcctactgtgagtaacagcagctggggggagacc
tcacgtgccaatggcccagtgcagggaggctggggctcttccaagcctcaggaaagcagc
aacagcagcactggcagcggaggaggtggcggcatgggttcatggggtggtcccggtact
gttaagcagaacacatctagctggggcaatggcagcaaacaggaccagggcatggagccc
actggctgggaagagccctcccctccctccatccgcaggaagatggagattgacgacgga
acgtccacctggggcgatcctggcacctacaacaagactgtcaacatgtgggatcgcaac
aatcccaataataacccaggcaacagcggcccacctcccactaagaatggtggagtgatt
atccccaacaataacaacaacaatcactctgtcggccctggcaacaacaatcaccatcac
actcaccacatgcaccaccatccccatccccatccccatcatggccagcccccaactcac
ctgcaacaccatggtaacaacaatgggtcacccagcaatggcaccccacatccaggcgcg
ggcccccagggtagaccccccctcgccaacccaggttggggagagcttcccaatgttcaa
cccaagtcggagcctgcttggggagagccagcagttccaacatcagtggacaatggtacc
tctgcctggggcaagcccccaggtggagttggaggatggggagacggtggccacgagccc
tctggaccctatggcagggccaacggacccacaggttctgcaccctgcaagccaggcccc
aaacctatgcaagatggctggggaaatggaggagaggagatgggcatgtctaccggccag
tgggacgctgaggatggggacatgtggaacagccccacctcccaggagagcagctcctcc
tgcaactcctggggcaatggacccaagaagggcccgagcaaggggaagatgggcaagcca
gatgaggcttggatcatgaaccgtctcatcaaacagctcactgacatgggctttccgaga
gatcctgctgaggaggctttgaagagcaacaacatgaaccttgaccaggccatgagcgct
ctgttggagaagaagacagacctggacaagcggggcatgggcatgtctgattataacaac
ggcatgaacaagcccatggtgtgtcggccctctgcactctccaaagacccctccgaccgc
acctcctttcttgacaaggatggtgttctgtcagatgatgcccccccatcaccgtttctg
ccttcccccagcctgaagctccccctggccaacagtagccttcctgggcagggtctggga
cagggcaacccggggctggccatgcaaaacttgaacaatagacagatacccagtggaatg
tttggcagtagtggagcagcacaaacccgggccatgcagcagcagcctcctcagccacca
gtgccacctctcagctcctcccagcctagtctacgtgctcaagtgcctcagtttctctcc
cctcaggtccaagcacagctcttgcagtttgcagcaaaaaacattggtctgaaccctgca
cttttaacctcaccaataaaccctcaacaaatgaccctcttgtaccaacttcagcaactg
caaatggcgtaccagcgtttacaaatccagcagcagatgatgcaggcgcaacgcaatgtt
tccggccccattagacaacaagagcagcaagttgcacgtacaatcaccaacatgcagcag
cagatccagcagcaccagcgtcagctgtaccaagcgctgctgatgaagcagcagcaactt
ccctctcattcctcctcttcttcctcctcctccgctggtctgcatccccccggtggcccc
gccggaggccatggttccggcaaatcaaccctggaccccttcacaggcccacaccaggct
ccgggcctcgccgacacactgcacaccaaagagccgccgtcttcgcccaacgcctacagc
acctaccctctctctggactgaatccaaacatgaatgtaaactgcatggaggttgggggt
ttgtccgtgaaggagccccttcagccccaatcccgcctgtcccagtggacacactccaac
tccatggacagcctctctggcaactcctcaaacatggagaacaacctcaataagcacggt
acgtgcaagagaaacacaggtgccatatctgctgcctctaccctgggcccccctgggaag
cccccccagatggaggactcatacagcccttacaatctaatgtccagctctgagtccccc
accagccccctggtgcccccagacagctggggtcagggcaagagccctaatgaaaagatc
tccaatgggaccaacattaactggcccccagagttctgcccaggtgtgccatggaagggc
cttcagaacatcgaccctgagaatgaccccaacatgacccctggcagcgtccccagcggt
cccaccatcaataccaacatccacgacgtcaatcgatacctgctacgggacaggaatgga
gggaaactgtctgacatgaagtccacctggtccccagggcccatctcccagagccaagcc
tctctgtcccatgagctgtggaaagtccctcaggggccacgcagtaatgcagccccctcc
cggcccccaccaggcctcaccaacaacaagccctcttctacctggggcggcaactcactg
ggcctggcccaaggctggagcggctcctactcctctgagggaaccacctggagtactgac
agctccaacaggaccagcagctggctcgtgctgaggaatctcaccccacaaattgatggt
tcgactctgcggaccctgtgcatgcagcacggccccctgatcacattccacctcaacctg
acgcaggggaatgctgtggtgcgctacagctccaaggacgaggccgcaaaggcccagaag
tctctgcacatgtgtgtgcttggaaacaccaccatcctggcggagtttgccggcgaggag
gaggtgaaccgcttctttgcacaaggccagtcgctgggggctaacaccactagctggcag
gccaacccgggaaccaatcaaaaccggatgggcggggcagcacagtcccactctatgggc
cagtggagcagcagcggcggcggtggaggcaaggccagcggaggcgacctgctgtggggt
ggtgtgccccagtactccagcctgtggggaccgccgagcggagaggatgcccgcgtgatt
gggagccccactcccattaacaccctgctgcctggagatctgctgagtggggagtccatg
tag
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integrated database retrieval system
