Epinephelus fuscoguttatus (brown-marbled grouper): 125884783
Help
Entry
125884783 CDS
T08419
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
efo01002
]
125884783
Peptidases and inhibitors [BR:
efo01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125884783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
SR-25
Motif
Other DBs
NCBI-GeneID:
125884783
NCBI-ProteinID:
XP_049425926
LinkDB
All DBs
Position
LG24:complement(13088417..13125902)
Genome browser
AA seq
1243 aa
AA seq
DB search
MVPSLHWLLLLWGLQGLLAQDYDEDYEEVVVTTKKKSKVNPSNAIPQNGKSLIDEDCSLE
LAFLIDSSESAKDNHAQEKRFVTDVMDRLQNLRLQTGRGLSARAALLQYSSHVIIEQTFK
QWRGIDDFKARITPIVYIGHGTYTTYAITNLTRIYLEESDLRSIKVAVLLFDGISHPRNP
DIFSAVADAKNQGVRFFTIGITPEANEAPNMAQLRLIASSPASRYLHNLQDRGIVDKFIK
EITSLADEGCPLAQSTCACEKGERGALGPPGKKGRPGDDGSPGTKGQKGEGGLSGLPGRE
GAEGKAGYKGEKGERGECGTPGIKGDRGPEGTIGPRGNRGLQGALGPPGDIGPEGAMGKK
GERGLPGPPGIQGETGIGLPGPKGDVGYQGPTGPPGPLGIGEPGPPGPQGPQGVQGERGP
IGEGLPGPKGERGLEGSRGPRGQPGIGIKGDKGDFGPPGLPGPLGLTGVGIQGEKGVEGP
RGPPGSRGPPGEGLPGSKGDQGLPGEVGAPGERGAGDPGAKGEPGSTGMSGLPGLPGEDG
APGQKGEPGPSGLRGPEGAPGIGTQGEKGDQGQRGIRGLTGPPGIAGPSGPKGEPGAQGR
GGLPGPPGRFVAGPKGDLGPSGPPGPIGETGYGLPGPKGDRGDSGPAGPLGPKGDGYPGP
MGPPGLPGLPGEPGQEGVGIPGPKGDVGFRGLPGLPGPPGEGLQGPPGNTGRPGPPGPIG
PQGQGVQGPKGEQGVQGVTGPRGVPGEGFPGAKGDRGSSGERGLKGIKGELGDPGTPGLP
GRAGVKGEAGLTREDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVN
ALVDRVTVGRNATRIGLVLYSLEVKLVFNLARYVTKQDIKQAIRNIPYMGEGTYTGTAIR
KATQEAFYSSRLGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIVNTSDPT
QAEFMRELNLIASDPDSEHMFLIDDFNTLPALESKLVSQFCEDENGALIYNRVTNGYNGY
GNNGYNGNNGNRNGNNGNYVVGGYGYRPVTDQQVLNGRQSGTSTGTSTQSHGGRVVTTQH
GSKGSSTVTDRHGGGGQHVFTETHFGRERGDTFNRNNSDFTPPSKEDSSSTQGSSSSSSS
SSSSSSSTRISTSSSGVTIQHERVPRPALPKETVPLDPRCGLVLDQGTCRDYNIRWYYDK
QANACAQFWYGGCNGNKNRFDTEEECKRTCVTGRSTGTLSTGG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggtcccctcactgcactggctcctgctgctgtggggacttcagggtcttttggcacag
gactatgacgaagactatgaggaagtggtggtgacaacgaagaagaagagcaaagtaaat
ccctccaatgccataccacaaaatggcaaatccctcattgatgaagattgcagtttggag
ttagcctttctgatcgacagctcagagagcgccaaagacaaccatgcccaggagaagcgc
tttgtcacagatgtgatggaccgactgcagaacctccgtctgcagaccggccggggcctc
agcgcccgggcagctctccttcagtacagcagccatgtcatcatagagcagaccttcaaa
cagtggaggggcatcgacgacttcaaggcccggatcactcccattgtgtacattggtcat
ggcacctacaccacttacgccatcaccaacctcacccgtatttacctggaggagtcggat
ctcaggagcataaaggtggccgttctgctctttgacggcatctcgcaccccaggaacccg
gacatattttcagctgtggctgatgccaagaaccagggcgtccgcttcttcaccataggc
atcacacctgaagccaatgaggcccccaatatggctcagttgcggctgattgccagctcc
ccagcatcacgctaccttcacaacctgcaggacagaggcattgtggataaattcatcaag
gagattacgtcgctggcggatgaagggtgtcctctagcccagagcacgtgtgcctgtgaa
aagggtgagaggggagccctcggccctcctggcaaaaaggggcgtcctggagatgatgga
agccccggcacaaaaggacagaagggtgagggtgggctcagtggtcttccaggtcgggaa
ggagcagagggaaaagctggatacaaaggagagaagggagagagaggggagtgtggtaca
cctggaataaagggagacagaggtcctgaaggtaccattggtccaagaggaaatcgtggc
ctgcagggtgcgcttggtccacctggcgatatcggacctgaaggtgcaatgggtaaaaaa
ggggaaaggggacttcctgggccacctggaatccaaggggaaacagggattggccttccg
ggacccaagggtgatgttggctaccaggggccaacagggcctcctggtcctctaggaatt
ggcgagcctggaccaccggggcctcaagggccacagggagtccaaggagagagaggacca
ataggagagggtctccctggaccaaagggagagcgaggcttggaggggtcgcgggggccc
agaggacagccgggcattggaatcaaaggagacaagggggattttggccctccaggtctt
ccagggccactcggcctcacaggagttggcatacagggcgagaagggcgtggagggacca
agagggccaccaggaagcagaggtccaccaggagagggcttgcctggatccaagggggac
caaggtttaccgggggaggtaggcgccccaggtgagagaggggctggagaccctggagct
aagggtgagccagggtcaacagggatgtcaggtttgcccggcctgccaggggaggacgga
gcccctggacagaagggtgagccgggaccttcaggtctcagagggccagagggggcacct
ggaattggcacccagggtgaaaagggtgaccaaggccaaagaggaataaggggcttgact
ggtccacctggcattgctggaccctcgggaccaaagggagaaccaggggcacaaggcagg
gggggtttacctggtccaccaggacgtttcgtcgccgggccaaagggtgatcttggccca
agtggtcctccaggtccgattggggagactggctacggacttcctggtccaaagggtgac
cgtggagattcaggtcctgcaggtcctttaggtcccaaaggagacggctatcccggccct
atgggccctcctggtctgcctggacttccaggagaacctggccaggaaggagtgggcatc
cctggaccaaagggggatgttggtttccgagggttgcctggtttaccaggacctccaggc
gaaggcctccaaggacctccgggtaacactgggcggcctggccctccagggccaataggg
ccacaaggacaaggagttcaagggccaaagggtgaacagggggtccagggcgtgacaggg
ccaaggggggtacctggagaaggctttcctggagctaaaggtgaccgtggctcgtcaggg
gagagggggctgaagggaatcaaaggagaactgggagaccctggaaccccaggactacct
ggccgcgctggtgtcaaaggtgaagcaggcctcactagagaggacatcattcggatgatc
aaagagatctgtggatgtgggatcaagtgtaaggagaggcccatggagctggtgtttgtc
attgacagctcagagagtgtgggcccagagaactttgagatcatcaaggactttgtgaac
gccctggtggaccgagtcacagtgggccgcaacgccaccaggatcggcctggtgctgtac
agcctggaggtgaagttggtgttcaacttggcccgctacgtcaccaaacaggacataaag
caggccatcaggaacatcccatacatgggagagggcacctataccggcacagccatccgt
aaagccacccaggaggccttctactcttcacgtctgggagtcagcaaagtggccattgtg
atcactgatggacagacggacaagcgagagccagtgaagctggatatagctgtacgagaa
gcacatgctgccaatattgagatgtttgcactggggattgtgaacacctcggaccctacg
caggctgagttcatgagagagctcaatctgatcgcttctgacccagacagcgagcacatg
ttcctcattgatgacttcaacacactgccagcgctggaatccaagctggtcagccagttc
tgcgaggatgagaatggagccctgatttataacagagtaactaacggctacaacggctat
ggaaacaatggctacaacggcaacaacggcaacaggaacggcaacaatgggaactatgtt
gtcggtggctatgggtaccgacctgtgactgaccagcaagttctgaacggccgtcagagt
ggcaccagcactggcaccagcactcagagccacggaggccgcgtagtgaccacccagcat
ggcagcaaaggctccagcacagtcacagacagacatggtggaggagggcagcatgtgttc
actgagacacactttggaagagagcgcggggatacatttaaccgcaacaactcagacttc
acacctccgtccaaagaggactcctccagcacccaaggctcctcctcatcttcatcttca
tcatcatcatcttcttcttctacaagaatatccacatcctcctcaggtgtaaccattcag
catgagcgtgtaccaaggccagctcttcccaaagagaccgttcccttggaccctcgctgt
ggcctggttctggaccagggcacatgtcgggactataatatccgctggtactacgacaag
caggccaatgcctgcgcccagttctggtacggaggctgtaacggcaacaagaaccgcttc
gacacagaggaggagtgcaagaggacgtgtgtgaccggcagatccactggtacactctcc
actggaggctga
DBGET
integrated database retrieval system
