Epinephelus fuscoguttatus (brown-marbled grouper): 125885102
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Entry
125885102 CDS
T08419
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04140
Autophagy - animal
efo04148
Efferocytosis
efo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125885102 (vps16)
04148 Efferocytosis
125885102 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125885102 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125885102 (vps16)
Membrane trafficking [BR:
efo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125885102 (vps16)
Hops complex
125885102 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
125885102
NCBI-ProteinID:
XP_049426497
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Position
LG24:complement(631861..640455)
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AA seq
834 aa
AA seq
DB search
MAFITANWNPLGEAFYRKTELYEMCWNLRDGLRDSLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVSIASFPWKSGPVVHLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEIPGLQGKPSCWVVL
TQDRQTKVLLSNGPDLYILDNTSCTAVCPPGLSPQAGSIVHMSVSFSYKYLALFTDTGHL
WTGSSHLQDKLSEVDTKKSTPPKQMVWCRRPKSQQPSVVLMWDRLLMVAGVCHDTIQFPI
EDHCVLVGELDGIRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDANTQKSLLRAASFGKCFLTDFSSDPFVTICR
ELRVLNAVRESTVGLPLTHTQFKQMTIQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLESRLSLLQSAVDEYNKAKNE
FSAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKYEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERKSDAEMGAVLSRCPASDRLLIDRLNRARATAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccaactggaacccgctgggagaagctttttatcgtaagacagag
ctgtatgagatgtgctggaacctgagggacggactcagagactctctggtggctgcagct
ccatacggaggacccatcgcactcctcagagaacctcacagacgttctcccagttctcgt
cctcagttagagatttattctgcatctggagtcagcattgccagcttcccgtggaagagt
ggtcctgtggtccacctgggttggacagtcagtgatgaactgttgtgtattcaggaggat
ggatcagttctgatctacgacctgtttggatccttcaagagacacttcagcatgggacag
gaagtggtccagagtcaggtgttagaagccaaagtgttccactctccttatggaacaggt
gtggccatagtaacgggctcctcccgcttcaccctggcaaccaacattgatgacctgaaa
ctccggaggttacctgagatcccaggtcttcaggggaagccgtcctgctgggtcgtcctc
actcaggacagacagactaaagtcctgctgtcaaacggacctgacctctacatcctggac
aacacgtcttgcactgctgtgtgtcccccaggtcttagtccgcaggccggcagtattgtc
cacatgtctgtgtcctttagttataagtacctggctctcttcactgataccgggcacctg
tggacaggctcctcccaccttcaggacaaactgagtgaagtggacactaaaaagtccacg
cctcccaaacagatggtctggtgtcgcagaccaaagagtcagcagccctctgtggtgttg
atgtgggacagactgctcatggtggccggagtgtgtcacgataccatccagttccccata
gaggatcactgtgttttggtcggagagctggatggaattcggatcatcagctcgaccaat
caggagctgcttcaggaggtgcctctggtctgtcaggacatctttaagattgcttccatg
gctcctggagctctgctgctggaggcccacagggagtacgagaagtcgagtcagaaggct
gatgagtacctgagggagataaaggagcagagcatgctgggagaagcagtccgacagtgt
gtggaggcggcaggacacgaatatgacgccaacacccagaaatccctgctgagggcggcg
tccttcgggaagtgtttcctgacagacttcagttcggacccgttcgtgacgatctgcaga
gaactccgagtcctgaacgccgtcagggagagcaccgtggggctgccgctcactcacact
caattcaaacagatgactatacaggtgctgatcgacaggctggtgtatcgacagttttat
ccgttagcgatagaagtctgccgttacctgaagattccagattatcagggagtcagcaga
gtcctcaaacactgggcctcatgcaaggtgcagcagaaggacctatcagacgaggccata
gcccgagcggtgtgtgtgaaggtgggagactcacctggtgtgtcttactcacacatcgca
gccaaagcgtacgaatgtggacgcactgagctcgccatcaagttgttggactttgaggct
cggtctggagaacaagtccctctgctgttgaagatgaagaggagtcagctggctctcagt
aaagctgtggagagtggagatactgacctagtttacacggtggtgacgtacctgaagaac
gagatgaacagaggagacttcttcatgactctgaggaaccaaccggtcgcactgagtctc
tacagacagttctgtaagctgcaggaacaggagactctaaaggatctttataaccaggac
gatgatcaccaggaacttgccaactactacgtcactgccagctacagagaaaagaggtta
gaaagccgcctgtctctcctgcagagcgctgtcgatgaatacaacaaggccaagaatgag
ttctctgcaaaggccacagaggacgagatgcgtcttcttcgcttccaacgcaaactggac
gatgagaaaggggcggggctactgggactgtccctgcaggccaccatggaggctctgctg
gctttaggactccacaaacaagcagaacaactttacagagacttcagagtacctgacaaa
agatattggtggttgaagctgaagtctctggcagagaaggaggagtgggaggagttagag
aagttctcaaagagcaagaagtctcctattggctacctggcgtttgttgaagtctgcatg
aagagtaacaacaagtacgaggccaagaagtacgtttccaaggtgacgcctgagcagaag
gtcaaagctcacctggctgtcggtgatctggagggtgcggcggacgctgcaatcgaacgc
aagagcgacgcagagatgggggcggtcctctccagatgccccgcctccgaccgcctcttg
attgacaggttgaaccgagccagagccaccgctgccaaaaagtga
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