KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125885411
Entry
125885411         CDS       T08419                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:efo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125885411 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:efo03021]
    125885411 (taf5)
   03036 Chromosome and associated proteins [BR:efo03036]
    125885411 (taf5)
Transcription machinery [BR:efo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125885411 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     125885411 (taf5)
Chromosome and associated proteins [BR:efo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     125885411 (taf5)
    STAGA complex
     125885411 (taf5)
    TFTC complex
     125885411 (taf5)
    SAGA complex
     125885411 (taf5)
    SLIK complex
     125885411 (taf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st TFIID_NTD2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_VPS8 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 DSE1_N Beta-prop_SCAP Beta-prop_Aladin PAC11 Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th CFAP251_N Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR19_1st ASA1 Tricorn_2nd Beta-prop_DCAF12 Beta-prop_NOL10_N WD_LRWD1 Beta-prop_Nup120_160 PEP5_VPS11_N DNAI3_WD LisH_PAC1 PROPPIN CDK5RAP3 Beta-prop_ACSF4 LisH_TPL Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 125885411
NCBI-ProteinID: XP_049426871
LinkDB
Position
LG3:complement(29206096..29211764)
AA seq 746 aa
MAAVQGGMGDAAEEKDIKTEPANDGCGNNNANEGRLLSTSPGSSAPAGGNKSPEEQQTLL
AVLQFLKKNKLTESVEILRREAGLPEDSLDLKGSDSSGAGSGAAAGSVDVESGGDTSSLL
SRVTSSSSAVAQAPTKAVGEDQPDVNVVLSAYSQQGDPALYQVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRVLSSLSKREHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQID
AMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSMGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYTFLNAYQGL
TAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTA
SESKILHGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTHF
SPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYVATGSSDRTIRL
WDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTDT
IYSLRFSRDGEILASGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELILGTY
LSKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcggccgtacagggtggtatgggcgacgcggctgaagaaaaagacataaaaacagaa
ccagcaaacgacggctgtggaaataataatgcaaacgagggaaggttgctctctacgtcc
ccgggctccagtgctccggctgggggtaacaaatccccggaggagcagcagacgctgctg
gctgtcctgcaattcctcaaaaagaacaaactgaccgagtccgtcgaaattctgcgtcgt
gaagcgggattaccggaggactcactggacctgaaggggagtgactcatccggggcaggc
tccggggctgctgcgggcagcgtggacgtggaaagtggcggggatacgagctctcttctg
agccgggtgaccagctcatcctccgctgtagcccaggcgcctactaaagctgttggggag
gatcagccagatgtcaatgtggtgctgtcagcttacagccagcagggagacccggcgctg
taccaggtttactacagcggcctgaagaagttcatagagtctgtcttggactgtcaccga
gcggagctgtcccaggtcttctacccactgtttgtacacatgtatctggaactggtgtac
aacaatcacgaaagtgaggccaaggcgttctttgaaaagttcagcggcgatcaagagtgt
tattacgaagacgacttgcgcgttctgtccagcctgtccaagagggagcacatgagaggc
aacgagaccctgctggacttccgtaccagcaagttcgtcttgcgtatctcccgggactcc
taccagctgctgaagaggcacctgcaggagcgtcagaacaaccagatttggaatatcatc
caagagcacctctacattgacatcttcgatggcatgccgcgcagcaagagccagatcgac
gccatgtctggcagtttggcgggagaggccaagcgagaggccaataaggctaaggtttat
tatggactgctgaaggaaccagaaattgagctgcctcttgatgatgaggatgaggaggcc
gagaatgaggagggtaaacccaagaagaagaaacctaaaaaggacagcatgggctccaag
agcaagaagcaggatcccaatgcaccttcacagacaaggatacctcttccagaactaaaa
gattcagacaagctggacaagatcatgtacatgaaggaggccaccaagaggatccgcctg
ggacccgataacctgccctccatctgcttctacacatttctgaatgcttaccagggtctg
actgcagttgacttcacagatgactccagcctgatcgcaggaggcttcgctgactccaca
gtgcgggtgtggagtgtcacaccgaaaaagctccgcaaggtcaagtctgcagcagacttg
aatctgattgacaaagagtcagacgatgtgctggagaggatcatggatgagaagacggca
agcgagtcaaagatcctccatggacacagtggaccggtttatggcatcagcttcagccca
gacagaaactacctgttgtcgagttctgaagatggtacagtccggctatggagtcttcaa
acatttacttgtctggtgggctacaaaggtcacaactacccagtgtgggacacccacttt
tccccccatgggtactattttgtctccgggggacatgacagagttgctcgtctgtgggca
acagatcactaccagcctctgaggattttttctggtcacctagctgatgtcacctgcacc
cgcttccaccccaactccaattatgtggccacagggtcttctgatcgcacgataagactt
tgggatgtcctgaatggaaactgtgtccggatcttcactggtcacaagggtcctatacat
gcgctggctttctctcccaatgggaagtttttggcttcaggagccactgatggcagagtt
cttctgtgggatattgggcatgggctgatgatcggagagctgaaaggccacacagatacc
atctactcactccggttcagcagagacggagagatccttgcatctggctccatggacaac
acagttcgtctgtgggatgctacgaaagcatttgatgatttagagactgatgatttcaca
gcagctacaggacacatccatctacaagataactcccaggagcttattttgggcacctac
ttgtctaaatccacacctgtcatacaccttcacttcacccgcaggaacctgctgctggct
gctggggcctacaatccatga

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