Epinephelus fuscoguttatus (brown-marbled grouper): 125885411
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Entry
125885411 CDS
T08419
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125885411 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125885411 (taf5)
03036 Chromosome and associated proteins [BR:
efo03036
]
125885411 (taf5)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125885411 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
125885411 (taf5)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125885411 (taf5)
STAGA complex
125885411 (taf5)
TFTC complex
125885411 (taf5)
SAGA complex
125885411 (taf5)
SLIK complex
125885411 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
PROPPIN
VPS8_N
CDK5RAP3
LisH_TPL
LisH_PAC1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
125885411
NCBI-ProteinID:
XP_049426871
LinkDB
All DBs
Position
LG3:complement(29206096..29211764)
Genome browser
AA seq
746 aa
AA seq
DB search
MAAVQGGMGDAAEEKDIKTEPANDGCGNNNANEGRLLSTSPGSSAPAGGNKSPEEQQTLL
AVLQFLKKNKLTESVEILRREAGLPEDSLDLKGSDSSGAGSGAAAGSVDVESGGDTSSLL
SRVTSSSSAVAQAPTKAVGEDQPDVNVVLSAYSQQGDPALYQVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRVLSSLSKREHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQID
AMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSMGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYTFLNAYQGL
TAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTA
SESKILHGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTHF
SPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYVATGSSDRTIRL
WDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTDT
IYSLRFSRDGEILASGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELILGTY
LSKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtggtatgggcgacgcggctgaagaaaaagacataaaaacagaa
ccagcaaacgacggctgtggaaataataatgcaaacgagggaaggttgctctctacgtcc
ccgggctccagtgctccggctgggggtaacaaatccccggaggagcagcagacgctgctg
gctgtcctgcaattcctcaaaaagaacaaactgaccgagtccgtcgaaattctgcgtcgt
gaagcgggattaccggaggactcactggacctgaaggggagtgactcatccggggcaggc
tccggggctgctgcgggcagcgtggacgtggaaagtggcggggatacgagctctcttctg
agccgggtgaccagctcatcctccgctgtagcccaggcgcctactaaagctgttggggag
gatcagccagatgtcaatgtggtgctgtcagcttacagccagcagggagacccggcgctg
taccaggtttactacagcggcctgaagaagttcatagagtctgtcttggactgtcaccga
gcggagctgtcccaggtcttctacccactgtttgtacacatgtatctggaactggtgtac
aacaatcacgaaagtgaggccaaggcgttctttgaaaagttcagcggcgatcaagagtgt
tattacgaagacgacttgcgcgttctgtccagcctgtccaagagggagcacatgagaggc
aacgagaccctgctggacttccgtaccagcaagttcgtcttgcgtatctcccgggactcc
taccagctgctgaagaggcacctgcaggagcgtcagaacaaccagatttggaatatcatc
caagagcacctctacattgacatcttcgatggcatgccgcgcagcaagagccagatcgac
gccatgtctggcagtttggcgggagaggccaagcgagaggccaataaggctaaggtttat
tatggactgctgaaggaaccagaaattgagctgcctcttgatgatgaggatgaggaggcc
gagaatgaggagggtaaacccaagaagaagaaacctaaaaaggacagcatgggctccaag
agcaagaagcaggatcccaatgcaccttcacagacaaggatacctcttccagaactaaaa
gattcagacaagctggacaagatcatgtacatgaaggaggccaccaagaggatccgcctg
ggacccgataacctgccctccatctgcttctacacatttctgaatgcttaccagggtctg
actgcagttgacttcacagatgactccagcctgatcgcaggaggcttcgctgactccaca
gtgcgggtgtggagtgtcacaccgaaaaagctccgcaaggtcaagtctgcagcagacttg
aatctgattgacaaagagtcagacgatgtgctggagaggatcatggatgagaagacggca
agcgagtcaaagatcctccatggacacagtggaccggtttatggcatcagcttcagccca
gacagaaactacctgttgtcgagttctgaagatggtacagtccggctatggagtcttcaa
acatttacttgtctggtgggctacaaaggtcacaactacccagtgtgggacacccacttt
tccccccatgggtactattttgtctccgggggacatgacagagttgctcgtctgtgggca
acagatcactaccagcctctgaggattttttctggtcacctagctgatgtcacctgcacc
cgcttccaccccaactccaattatgtggccacagggtcttctgatcgcacgataagactt
tgggatgtcctgaatggaaactgtgtccggatcttcactggtcacaagggtcctatacat
gcgctggctttctctcccaatgggaagtttttggcttcaggagccactgatggcagagtt
cttctgtgggatattgggcatgggctgatgatcggagagctgaaaggccacacagatacc
atctactcactccggttcagcagagacggagagatccttgcatctggctccatggacaac
acagttcgtctgtgggatgctacgaaagcatttgatgatttagagactgatgatttcaca
gcagctacaggacacatccatctacaagataactcccaggagcttattttgggcacctac
ttgtctaaatccacacctgtcatacaccttcacttcacccgcaggaacctgctgctggct
gctggggcctacaatccatga
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integrated database retrieval system
