Epinephelus fuscoguttatus (brown-marbled grouper): 125885467
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Entry
125885467 CDS
T08419
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125885467 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125885467 (taf5l)
03036 Chromosome and associated proteins [BR:
efo03036
]
125885467 (taf5l)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125885467 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
125885467 (taf5l)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125885467 (taf5l)
STAGA complex
125885467 (taf5l)
TFTC complex
125885467 (taf5l)
SAGA complex
125885467 (taf5l)
SLIK complex
125885467 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
PROPPIN
Nbas_N
Beta-prop_IP5PC_F
WD_LRWD1
Lysis_col
Motif
Other DBs
NCBI-GeneID:
125885467
NCBI-ProteinID:
XP_049426977
LinkDB
All DBs
Position
LG3:complement(4029401..4040877)
Genome browser
AA seq
600 aa
AA seq
DB search
MKRVRTEQIQYTVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYETQYSRLRSFLSETEISWAKEVSSILYPLFVYLHLDMVHCGLKGAVDGFYS
RFHSAFLQDSEQRAIIEQLRHVLTTQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRAFSKHLQVEVTASRRTDYQLYGAAGGATTAPNSTSSWAGVDGAEGGEGVEVP
AGIPQSEAALDALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSLIRLACDVLEEEVDEEDSCGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYQGHVYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLSDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
IDNSVRVWDIRNSHGGTPADGSSSELVGMYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgttcgcactgagcagatccagtataccgtggctcagtacctgaagcggagg
cagtatgtggacactgatggctccctgaaaggagccaagctcttccagtcagcagaggag
atggcggccagcctcacagtgcagactgagtcggggtgtgccaacattgtctctgctgcg
ccctgtcaatcagacccacagcagtacgagactcagtactccaggctgcgctcctttctg
tcagaaacagaaatatcctgggcgaaggaggtgagcagcatcctctacccactcttcgtc
tacctccacctagacatggtgcactgtggcctgaagggggcagtagatggtttttacagt
cgtttccacagtgcttttcttcaggacagcgagcagcgcgccatcatagagcagctccgc
catgttctcaccactcaggacgttgcagccaaccccaagctgagtgctttcctggagcac
aagtacgtggtgcacctgaccgagccggcctacagctacctgctgcgctacctgcagagt
gaggacaacagcgccctctgcagggcctttagtaaacacctgcaggtggaggtcactgcc
tcgagacgcacagactaccagctatatggagctgctggcggagcgaccacagccccaaac
tccacctcctcctgggcaggagtggatggggcagagggtggggagggggtggaggtccct
gcagggattccacaaagtgaggcggccctggatgctctgcaggactgcatcaagaaagtc
cgcgagggcccccctacgctcaccaccgtgtgtttctacgccttccaccacacggagcag
atgttaaacaccgcagaggtctcggctgacagccggctgctggccgccggtttcgacagc
tccacggtgaaactgtggagcctccgagccagaaaactgaaggccaaaccgcatcaggct
gacgtgtcgctcatccgcctggcctgtgacgtactagaggaggaagtggatgaagaggac
agctgcggcagtgagataaagacactacgaggtcacagcggccccgtgtttcgaaccgcc
ttcctgacagacagctccggcctgctctcctgctctgaggacacaaccatccgctactgg
gacctgggtagcttcaccaacacggcgctctaccagggccacgtctacccggtgtgggat
gtggacgtcagcccctgcagcctttacttcgccagcggctcccatgaccggactgctcgc
ctgtggacgttctcccgcacctatccgctgcgactttacgccggacacctttctgatgtt
gactgtgtgaaattccacccaaactccaactacctggccaccggctccacagacaagact
gtccggctgtggagcacccagcagggggcgtctgttcgcctcttcactggccaccgtggc
cctgtgctgtcactcgctttctcacctaatgggaagtacttggcgtccgccggcgaggat
caaagggtgaagctgtgggacttagcatcagggacgttattcaaagacctgcggggacac
acggacagcgtcaccagcctgtctttcagcccggacagcagcctggtggcgtcgtcgtct
atagacaactcagtgcgggtgtgggacattcggaactcccacggcgggacgccagctgac
ggctcatctagcgaactggtgggaatgtacactggaaacaccagcaatgtgctgaacgtc
cagttcatggcctgcaacctgctgctggtgacgggaactgcacaggagaaagcagaacag
tag
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integrated database retrieval system
