Epinephelus fuscoguttatus (brown-marbled grouper): 125885729
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Entry
125885729 CDS
T08419
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125885729
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125885729
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
U-box type E3
125885729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125885729
NCBI-ProteinID:
XP_049427419
LinkDB
All DBs
Position
LG3:complement(26239018..26255921)
Genome browser
AA seq
1748 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLNELKRQIMARERLKATDCDLQITNAQTREEYTDD
EAHIPKHSSVIVRRTPLGGVKPAGRTFIVDRSDTAVVGSSRPTDSSPSLSLAQLAKTANL
VDANASEEDKIKAMMSQSNHEYDPIHYSKKAVGPPPAHYTCFRCGKAGHYIRQCPMLMVQ
DKSVEGPKPVRISKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHDQSSSEDDTDPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTALLDSEEHVCYTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKRVRKQVQNAAPPPPRPQLVRPLHSRQQDP
LMANVTQPPPSAPPAAPQAQVPPPAPAPAPTPAPAPAPAAPSAPTPPHAAATVEEQADSP
APAPVADHQSPMHSTSHGEPPPPGETDPEPSVTPESSGTSESGSQNYHLTVIGHPPPVRA
PHPPGHQSRPHHSHRGGGRPWESRFYRSRGDHPPTHLQTAPPPAPVPPVYPAPSLYPPPP
QPYPPPYTSGPSLIPPTISYQPQPVYAPGPPGLNPPWVAPGAQPPLIPLPPLSQPPLSKE
DFYRQRHHRQDKATSKLDEFTKDFHKELMKYRNAPKRRRPSYSRSRSYSRSPFSRSPYSR
SRSRSRSRSYSYSPSRSRSRSRSHGRSYPRSPYSRRNGRSYGRSRSRSRSRSRSYGYRRS
GSPRSPPPYRPGGWEGAEGAGPYRSRSRSRSPGPGGFRSRSPGGRKPPPRELPPYEPKGL
SPGGNDRWERERYRQWEKEYADWYNKYYKDYDNQHPSLHHRGRGSRDRERDRMSPLSRDY
SPQGRGRRGREERSAPPHHPPSSSSTGTKSSTKVSKTKKVKRKRTGEEPEPSHQSVDRGD
ATPVRDEPMDEIPSLTKTPPMSSKASVGAATSKAPASKSTAAPAKPSTKSTSKTQADKTK
KEKSQKVKAKVKTEGVKAKSEKVKKKTGEGVVTKKKDSSSATKPLKTIKSKPEDAPNSTA
PKKEKSKSSSGRPALLKTPPLSSQSMPLHHPSLHDGPRGSHDMRGRRDLPQGGGLLPIPH
PHGLQLLHRPPSPDSRRRMGEEGRSLLGPPPGKLRRIDGLGGGGDVMSHSHMSHQPPLHR
LPPPSDRPGLLPLPVSRDMGRGDADRGPIRPLMDLQVKPTQRRIKLNRDLGRKGSTETAP
SDRTPSGPEKTTSTSDRSTAANSSEGDRPSGTAEGGRKEPSASSERGVSRERPGSAGERL
QGSDREQNRSSGLDRERDRASGSDRDRDRDRDRGLVSDRDRDRDRVSGSQKVAATVEKDP
EGERPSRTERKNSSGGSSGGRSVSLDKMTIAEKSAISRSMTDLQEKPSTSSKERGEGSER
SAKSARSVSKDRTERSVPSGEKPAAAHREAVKDGEESVVRSRPRISRKALTSHTTSSTRS
TQEAKRDSDKDQKSVLSKPAEQPPSSPVNSRGRSPSVSPAVSPAREEPLIQPPPRSKWER
EDDEEGQENGLSAPKEPSPVPQRSRGREGQTEAPKPVKGEGRDATREERRGAVREEKKGR
APREEGKGGRTAQANSDKPTKIKLVREEGRGGGRDEGRGVTGKEERATESRGGREENRGP
EPRRQRLCSDLGRETDEAAFVPDYSEGEGSEPEGGRSGSGSLSLSHPSSPTPTNHSGSVT
TGDKKKKKHKKHKKHKKHKKHGGQEKEGEQKQHKHKHKKKKHKKNKEKDAEEEEEEKVEK
AEEEGAPC
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttttcttccaaactggactacaacacagtcactttcgat
gggctgcatatcaccctcaacgagcttaaaaggcagattatggcccgagagcgcctcaag
gccacagactgcgacctgcagatcaccaatgcgcagactcgagaagaatacacagatgat
gaagctcacatcccgaaacactcgtccgtgatcgtccgccgcactccgcttggtggagta
aaacctgctggcaggacgttcattgtagatcgttctgacacagctgtggtgggatcttct
agacccactgattcttctccatctttgtcactcgcccaactcgccaagactgctaacttg
gttgacgctaatgcatcagaggaggacaagattaaagccatgatgtctcagtccaatcat
gaatatgacccgatacattactccaagaaggcagtcggtcctccaccggctcactatacc
tgctttcgttgtggaaaagctggtcattacattcggcaatgccccatgctgatggtccag
gataagagtgtcgagggtcccaagccagtgaggattagtaagggtattcctcagagcttc
atggtgaaagcagagccaggcaccaagggagccatgttaactagcactggagaatacgcc
atacctgctatagatgcggaggcatatgcacaaggaaagaaggagcgccctccgtttgtt
ccacatgaccagtcatcatctgaggacgatacagacccaatcccagatgaactcttgtgt
ccaatttgcaatgacctgatgacagatgccgtagttataccctgctgtggaaacagttac
tgcgatgactgtatcaggactgccttgttggactcagaggagcatgtctgctacacatgc
aaacagtcggacgtttcacctgacaatctcattgctaacaagtttctccgacaggctgtg
aacaacttcaagaacgagacagggtacaccaaacgcgtgcgtaagcaggtccaaaatgca
gctccgcctccaccacgccctcagttggtcaggcctctgcactcaagacagcaggaccca
ctgatggccaatgttactcaacctcctccaagtgcaccccctgctgctcctcaagctcag
gtcccacctcctgctcctgcacctgcacctacaccggctcctgctcctgctcctgctgct
ccctctgctcctactcctcctcatgctgctgctactgttgaagaacaagctgattcacca
gctcctgcacctgttgctgaccaccagtcacctatgcactccaccagccacggtgaacca
cccccaccgggtgagacagatccagaaccttctgtgacaccagagtcatcaggaacctct
gaaagtggatcacagaactaccatttaactgttattggccacccgccacctgtaagggcg
cctcatccaccaggtcaccaatcaaggccacatcactctcacagagggggaggcaggccc
tgggagagcaggttttacagaagcagaggagatcacccccccactcacctccagacagca
ccacctcctgcacctgttcccccagtgtacccagctccgtccctctacccacccccacca
cagccctacccccctccatacacctctggccctagccttatccctcctaccatcagttac
caacctcagcctgtttatgcccctggaccaccggggctcaaccctccctgggttgcccct
ggtgcccagccccctcttatccctcttccccccttgtctcagccacctctctctaaggaa
gatttctacagacagcggcatcacagacaggacaaagctacatccaaactggatgagttt
actaaagacttccacaaagagcttatgaagtacagaaatgcaccaaagagacggagacca
tcttattcaagatcccggtcatacagtcgctctccatttagccgttctccttactctcgc
tctagatccagatcaagatccaggtcctactcttattcccccagtcgatcccgctcccgt
tcacgctcccatggcaggtcttatccccgctccccttattctagacgaaatggacgtagt
tatggacgctcacggtcaaggtcccgctctcgctcaaggtcttacgggtatcggcggtct
ggctcgccacgttctcctcccccctaccgcccaggaggctgggagggagcagaaggagca
ggaccctacaggtctagatcacggtctcgttcccctggccctggtggcttccggagccgc
agccctggtggacgaaagccgcctcctcgggagctaccaccatatgaaccgaagggttta
agtcccggtggcaatgatcgctgggaaagagaaaggtatcgacagtgggagaaggaatat
gcagactggtacaacaaatactataaagactatgataaccaacatccctcactgcatcac
agaggtcgtggaagcagagacagggagagagacagaatgtccccattatctagagattac
tcccctcaagggagaggaagaagagggcgagaagagcgaagtgctccccctcaccatcct
ccatcatcttcgtcaacagggaccaagtccagcactaaagtctcgaagacaaagaaggta
aaaaggaagaggactggggaggaaccagagccatcgcatcagtcagtagacagaggtgat
gctactcctgtcagagacgaaccaatggacgaaatcccttcactcactaaaacgcctccc
atgtcttcaaaggcctcagttggagccgcaacctctaaagctccagcctcaaaaagcact
gctgcacctgctaaaccctcaaccaagtcaacatccaagactcaggctgataagacgaag
aaagagaagagccaaaaggtaaaagctaaagttaagacagagggtgtgaaggctaagagt
gaaaaggtgaagaaaaagactggggaaggagtggtgactaaaaagaaagactcctcttct
gccacaaaaccattaaagaccattaaatccaaaccagaagatgcccccaactcaaccgcc
cctaaaaaggaaaagagtaaaagctcttcagggaggcctgcgctgcttaagactcctcca
ctgtcctcccagagcatgcctctacatcatccctctcttcatgacggcccaagaggcagc
cacgacatgagggggagaagagatcttccacagggcggtggtctcctccccatcccccat
ccacatggactccaacttctccaccgacctccctcccctgacagtcggaggcggatggga
gaggagggccgctctttactcggacctcctcctggaaagctgaggagaatagatgggcta
gggggtggaggtgatgtcatgtcccactctcacatgtctcatcagcccccgctccacaga
ctcccacccccctcagacagacctggtcttcttcccctgccagtgagccgtgacatgggc
cggggagatgcagatcggggacccatcagacctctaatggaccttcaggtgaagccgacc
cagaggaggataaagctaaaccgagatctgggaagaaaaggcagcactgagacggcaccc
tcggacagaacaccgtcgggtcctgaaaagacgacctccacctcagaccgatcgactgct
gctaacagctctgaaggagaccgacctagcggtacagcagaaggtggaagaaaggagccg
tctgcatcttctgagagaggagtctccagagagagaccaggaagtgctggagaaagactg
cagggctcggacagggagcagaacagaagctcaggattggacagagagcgagacagagct
tcaggatcagatcgagatagagaccgagacagagacaggggcttggtatctgacagagac
agggacagggacagagtctctggctcccagaaggtagcggctacagtggagaaagaccct
gaaggagagaggccatcaaggacagagcgcaagaactccagtggtggaagttcaggaggg
aggtctgtctctctggataaaatgaccatcgctgagaaatcagccatctccaggagcatg
acggaccttcaggagaagccaagcacatcctcgaaggagagaggggaggggtcagagcga
tctgccaaatctgccaggagtgtgtccaaggacagaacagagaggagtgtcccctcagga
gagaaaccagctgctgctcacagagaagcagtgaaagatggtgaggagtcagttgtgagg
agcagacccaggatcagccgaaaggctttgacgagccacaccacgagctctactaggtca
actcaagaagcaaagcgggactcggacaaagatcagaagagcgtattgtctaaacctgct
gagcagcctccatctagccctgtgaacagccgaggccgcagcccaagtgtcagcccagca
gtcagcccagccagggaggagccgctcattcagccgcctcctcgctcaaagtgggagagg
gaagatgacgaagaaggccaggaaaatggactcagtgcacccaaggagccctcaccggtg
ccacagaggagcagaggcagagaagggcaaacagaagcacctaaacctgtgaagggcgag
ggacgggacgccacaagggaggagagaagaggagcggtgagagaagagaagaaagggaga
gcaccaagggaagagggtaaaggtggcaggacggcacaggcgaattctgacaaaccaact
aaaataaaactcgtgagggaggaggggagaggcggaggaagagatgaggggcgaggagtg
acggggaaggaggagagagccacagaaagcagaggaggacgagaggagaatcgtggccca
gagcccaggagacagcgtttgtgttctgacctgggtcgcgagacagacgaggcggccttt
gtgcctgactacagcgaaggcgagggctccgagccagagggaggaaggagcggcagcggc
agtctgtccctcagccacccctccagccccaccccgaccaaccacagcggctcagtgacc
acaggggacaagaagaagaagaaacacaagaaacataaaaaacacaagaagcacaagaaa
cacggcggccaggaaaaagaaggagaacagaagcagcataagcacaagcacaagaaaaag
aaacacaaaaagaacaaggagaaagacgcggaggaagaagaggaggagaaagtggagaaa
gcagaggaagaaggggctccgtgctaa
DBGET
integrated database retrieval system
