Epinephelus fuscoguttatus (brown-marbled grouper): 125885909
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Entry
125885909 CDS
T08419
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo02010
ABC transporters
efo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125885909
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125885909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efo02000
]
125885909
Transporters [BR:
efo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125885909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
125885909
NCBI-ProteinID:
XP_049427686
LinkDB
All DBs
Position
LG3:complement(33055614..33094709)
Genome browser
AA seq
2270 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPAVVGNFNDSIISRLFIDAKKILLYTQNDK
SYEGYKGLLRALRKMQKNTARFKLKDFLRDNETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADHNVSRMTQEIICKSSSDWLNKAQSHFLSNLDF
LKPIRKDVRSDPKFVQEVSAATDNLLESLGALAVELASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDNEPLSAYDNSSTPYC
NNMMRNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPKVWNFMENSEEMDMVRTLLQNNASAAFFNAQLSGTEWRVSDVSAFLSKVSEDQR
PKGSAYTWRDVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDIAHSNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVIEHGIIRALTGSKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDS
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KIVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENNNISTPLSKKGNAEAVCSEEEPSH
IEPGVYIENLVKVYSHGNKLAVDGLSLKFYKGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYIHGRDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDVGLPHKRHSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYSKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVP
EARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGTD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLALDPSMYGEQFTFISNDMPEDPHTNKLQGALTENPGFGTRCMEGQPIPDTPCTAV
KDEWSVPQVPQSVKDIFDNGNWSMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMKIS
EKDTLQNLTGRNISDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSLGARNSQLMSHTGDVD
DAIAELKRRFRLERGTAADRFFHSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNG
ILRASLKPDQDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVNKAKHMQFISGVQPFLYWLANFIWDMCNYIVPATLVIIIFVCFQQDAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVIFFCITVLIQYHFCFKARSSTSHLKPIGEEDEDVARERQRILSGGGQTDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSMVTSGEAYL
AGKSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLVKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RPVMEFIERELPGSTLKEKHRNMLQYQLPTSLTSLARIFSLLSKNKETLSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDVHLNKRDAVVVDISQLNSFLTDNKTRESCV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtttactgctttggaagaacttcacctaccgacggaga
cagactatccagctgctgatagagataatctggcccttgttcatcttcttcatcctgatc
tcagtccgaatacattatccaccctacgagcaacatgaatgccatttccccaacaaggct
atgccctcagcgggtaccctgccctgggtacaaggcatcatctgtaacgccaacaacccc
tgcttccgtaatcccaccccaggcgagagtccggcggtggtgggaaacttcaatgattct
ataatctcccgtctgttcatcgatgccaagaaaatcctgctgtacacccagaatgataaa
agctacgagggctacaagggactgttgagggccctcaggaagatgcagaagaacactgct
cgtttcaagctaaaggactttttgcgagacaatgagaccctttcccacttcctgcaccac
aacgcttcacttcctcatcacgcgctgaagcagatagtggaggctgacgtcaatctggag
aaggtgctcaccaaaggtttcggtttccacctcagagacctctgtaacaccacgcccctg
gaggagtttgtccacattgccgaccacaacgtgtcccgtatgacccaagaaattatatgc
aagtcctccagcgactggctaaacaaggcccagagccacttcctatccaacttggacttc
ctcaaaccaattcggaaggatgtgaggtcggatcccaaattcgtccaggaagtctcggct
gcaactgacaatcttctggagagcctgggagcactggccgtggagctcgccagtatgaag
agttggaaggacatgcgtaaggagatcctgtatctaactgcgaatgccacaggctctcca
aaccagatgtaccaggctgtgtcacgtatcgtatgtggacaccctgaaggaggcggcctc
aaaatcaagtctcttaactggtatgaagacaacaactacaaggcactattcggaaaccat
ggcaacgacagcgacaatgaacctctttctgcttacgacaactcttccactccgtactgt
aacaacatgatgcggaacctggagtccagccccatatccaggatgatctggagagctctt
aagcctctgctcatggggaagatcctgtacaccccagacactccagccacacagagaatc
atccatgaggttaataagaccttccaggagctcggcgtgctgagggacctcggagggatg
tgggaggagatgaagcccaaagtttggaactttatggagaacagcgaggaaatggacatg
gtcaggaccctgctccagaataacgccagtgctgcgttttttaatgcccagctcagtggg
actgagtggcgtgtgtcagatgtgtcggccttcctgtctaaggtctcagaggaccaaagg
cctaaaggatccgcctatacctggagagatgtcttcaacgaaaccgaccaagccatacag
acaatctcacgcttcatggagtgtgtgaacctggacaagctggagccagtggccaatgag
gagagactggtcaacaagtccatgggtcttttgaacaaccagaagttctgggctggaatc
gtgttccctgacatcgcccatagcaacagcactgacctgcctcccaacgtcaactataag
atccgcatggacattgataatgtggagaggacaaacaagattaaagatggctattgggac
cccggtcccagggcagaccccttcgaggaccttcggtatgtctggggcggattttcttac
ctgcaggacgtcattgagcatggaatcatcagagccctcactggcagcaaggagaagacg
ggcatctacattcagcagatgccctacccctgctatgttgatgacattttcctgcgggtg
atgagtcggtcaatgcctctcttcatgaccttggcgtggatgtactcagtagccatcatc
atcaaaggcgtggtatacgagaaggaggcccggctcaaggagaccatgaggatcatggga
ctaaacaacggcaccttgtggctcagctggttcatcagcagtttaatcccactcctgatc
agcgctggcttgttggtgatgttattgaagatgggaaacctgctgccttacagtgactca
ggcgtggtgtttcttttcctgggatccttcggcgttgtgaccatcatgcagtgtttcctc
atcagcaccctgttctctcgcgccaatttggcagccgcctgcggtgggattatttacttc
acgctctacctgccctacgtgttgtgtgtcgcctggcaagactatgtgggctttggagca
aaaatagtagtgagtctgctgtctcctgtggcttttggttttggctgtgagtactttgcc
ctgtttgaggaacaaggggtgggcatccagtggtcgaacctgctggccagccctctggag
gaagacagctacaacctgaccacctccatctgcctgatgctgtttgacgccgtgctctac
ggaataatgacctggtacatcgaagctgtgttccctggtcagtatgggatccccaggcct
tggtatttccctttcaccagaacatactggtgtggagaaaaggagaacaacaacatctcc
actcctctgtcaaagaagggcaatgctgaagccgtgtgcagtgaggaggagccgagccac
attgagccaggtgtttacatcgagaatctggtgaaggtctacagccatggaaacaagctg
gctgtagacggactgtcactgaagttctataaggggcagataacctccttcctcggccac
aatggagcgggcaagaccactactatgtcaatcctgacgggcttgtttccacccacatcg
ggcacagcctatatccacggcagggacatccgaaccgaactcagcaccattcggcagaat
ctgggcgtctgtcctcagcacaacgtgctcttcagcatgctgactgtggaggaacacatc
tggttctacgcccgtctgaaggggctgccggaggagaaggtgaaggccgagatggaacaa
atcgtgaatgacgtgggtctgcctcacaaacgtcattcccgcaccagcacactgtccgga
gggatgcagaggaagctgtccgtggccctggcttttgttgggggctcaaaggttgtgatc
ctggatgaacctactgctggcgtcgatccctacgcacgcaggggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtctactcatcacatggacgaggcagac
atcctgggtgaccgcattgccatcatctctcacggcaagctgtgttgcgtaggctcctca
ctcttcctgaagacccacctgggcacaggctactacctgactctggttaagagagactac
gacttgacacttcagtcttgcaggaattcagccagcaccgtctcctacagcaagaagact
gagaaggaggacagtgtatcagagagcagctcagatgccggtcttggtagcgaaccagag
agtgaaaccaccactattgatgtgtccctcatctccaatgtgatattcaagcatgtccct
gaggctcgtcttgttgaagaccttggccacgaaatcacctatgtcttgccctaccagtca
gctaaagacggagcctttgtggagctcttccacgagctggatgaccgtctcaccgacctg
ggaatatccagctatggaatatctgataccaccctggaggagattttcttgaaagtggct
gaggacagcggggtggatgttgagctctcagatggagttgtgccgacaaggactcgtcgt
catcatgcgtttggagaccaccagagctgcctgaagcctttcaccgaggacgactttgac
ttcaacgactctgaaggtgacccagaatcccgtgagaccgactggctcagtggaacagat
ggcaaaggctcataccaggtcaaaggctggagtttgaagagacagcagtttgttgcacta
ctctggaaacgatttctctatgcccggcgctccaggaaaggcttctttgctcagattgtt
ctcccagctgtgtttgtgtgtattgccctggtgttcagtctgattgtccctccatttggg
aagtacccaagtctggctctggatcccagcatgtatggagaacagtttacctttattagt
aacgacatgcctgaggaccctcacaccaacaaactccagggagctctgacagaaaaccca
ggatttggaacacgctgtatggaaggacaacccataccggacactccctgcacagcagtt
aaagatgagtggtcggtcccgcaagtccctcaaagtgtgaaggacatcttcgacaacggc
aactggtccatggagaatccctctcccctgtgtgagtgcagctgcgaaggacgcaagagg
atgcttccagagtgtcctgctggtgctgggggactcccaccaccacagatgaagatcagt
gagaaagacactcttcagaatttgaccggcagaaacatctcagattatctggtcaaaacc
tacgctcagatcattggcaagagcctaaggaacaagatttgggtcaacgagttcagatat
ggtggattctcactgggcgccaggaattctcagcttatgtcccacaccggcgatgttgat
gatgcgattgctgaactgaaaagacgtttccgtcttgagaggggaactgcagcagatcgt
ttctttcacagtctctccagttttatccaaggattggacaccaagaataacgtcaagatc
tggttcaacaacaagggctggcacagcatcggttctttcctcaatgtcatgaacaacggc
atcctgcgggcgagtctgaaacccgaccaagaccccaccaagtttggcatcactgcctac
aatcacccgctcaacctcaccaaggagcagttgtcacaggtcgcactgatgacgacatca
gtggatgtgctggtttccatctgcgtgatctttgccatgtcctttgtccctgccagtttt
gtagtcttcctcatccaggagagagtgaacaaggccaaacacatgcagttcatcagcggc
gtgcagcctttcctctactggctggccaactttatctgggatatgtgtaattacatcgtc
cctgccacactggtcatcatcatcttcgtgtgtttccaacaagacgcctacgtctcctcc
accaatctgccggtgttggcactgctgctgctgctctacggatggtcgatcacccctctg
atgtacccagcctcgttcttcttcaagatacccagcacggcctacgtggttctgacgagc
gtgaacatactgataggaatcaatggcagcgtctccacatttgtgctggagctgtttgga
agcaatgaaattggtggcatcaacgacatcctaaagaacgtgttcctcatcttccctcac
ttctgtctgggcagaggactgattgacatggtgaagaatcaggcaatggctgatgctttg
gagagattcggtgaaaaccggttccgctctcctctggcctgggacatggtgggaaagaac
ctgtttgcaatggccatagagggcgtgatcttcttctgcatcactgtcctcattcagtac
cacttctgcttcaaggccaggtcatccaccagtcatctcaagcccattggagaggaagat
gaggacgtagccagagagcgacagagaatcctgagcggaggagggcagacagacatcctg
gagctcagacagctcaccaagatttacaagaggaaacagaagccggcagtggaccgactg
tgtgtaggcatcccccctggagagtgctttggtttgctgggggtgaatggagcagggaaa
accagcacctttaaaatgctgacaggagactctatggtcaccagtggagaggcctacctg
gctggcaagagtgtaactacagagatagatgaggtgcatcagaacatgggctactgtcct
cagtttgatgccatcaacgacctgctgaccggcagagagcacctggagttttatgccatc
ctgagaggagtgcctgagaaggaagtctgtgaggtggcagagtggggcatccggaagctg
ggcttggtcaaatatgtggacaaggcagcaggcagctacagtggaggaaacatgaggaaa
ctatctactgccatcgctctcataggaggtccacctgtagtgttcctggatgaaccaaca
acaggcatggatcctaaagcacgtcgtgctctgtggaacgcaattcttagcatcatcaaa
gagggacgatctgtagtcctgacctcccacagcatggaggagtgtgaagcactttgcacc
agaatggccatcatggtcaacggcaggttccgctgtctgggcagtgtgcagcatctcaaa
aacaggtttggtgatggttacaccatcatcctgcgggtggctggcccagacccagatctg
cggccggtgatggaattcatcgagcgggagctgcctggcagcacactaaaagaaaaacac
cgcaacatgctgcagtaccagctgcccacctccctcacatccctcgcacgcatcttctcc
ctgctctcaaaaaacaaggagaccctcagcatagaagactactccgtctcacagacaacg
ttagaccaagtgtttgtaaatttcgccaaggaccaaagtgacgaggaccatttgaaagat
gtccatctgaacaaacgggacgctgtggtagtggacatttcccagctaaactctttcctc
acagacaacaagaccagggagagctgtgtctga
DBGET
integrated database retrieval system
