Epinephelus fuscoguttatus (brown-marbled grouper): 125886035
Help
Entry
125886035 CDS
T08419
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125886035 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125886035 (fip1l1b)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125886035 (fip1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
125886035
NCBI-ProteinID:
XP_049427893
LinkDB
All DBs
Position
LG3:complement(39152142..39163089)
Genome browser
AA seq
557 aa
AA seq
DB search
MSAEEADKTTTTDASAGDEEEEWLYGDESESKDEDEEAKLNAALSAPGDASTEDAAADAA
THATGNGVASEATAEAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTPYGAPPVNLNI
KTTGSRPYGQASKMKGVDLEAPGNINGVPVLEADMESFEEKPWRKPGADLSDYFNYGFNE
DTWKAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDISSLPVHTSKPDFTSPVSL
YKPAVSQVTRISPPQWPGPPVQDMSYYTKPSGTIDVIGGGTATISRVEGRRRHNLEGNNI
QVIAEQSDAEPTPAKIPTFFPPGPLPPNIPPPPFLPPPPNVNTAPPLIPPPRLPITVPPP
GFPPPPSGPPPSIIPTMDSSHGGGYDGRSVPPYPFPQGAYPPPIAGGVPPPWPPIMDNSK
PWDYYSRRDDKREKERERPRERTHEREREREHSPSAIGYTSDEERYRYREYQERGYGERH
RDRSSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGK
EASEDISADQENQEAME
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaaccaccactgatgccagcgccggagatgaggag
gaggaatggctgtatggagatgagtcagagagcaaagatgaggacgaggaagccaaactg
aatgctgcactcagtgcacctggtgatgcctcaacagaggatgctgctgctgatgcggct
acacatgctacagggaatggagtggcctctgaggcgacagctgaagctgcaggtgaggac
gttgacagtgacagcgacagcgatgacgacgatgatgatgtccgcgtcaccattggagac
atcaaaactggagcaccacaatacacaccttatggagctccgcctgtcaacctcaacatt
aagacaacaggctctagaccctatggacaagcctccaagatgaagggagtggacctggag
gctcctggaaatattaacggggttcccgtgcttgaggcggacatggagtcctttgaagaa
aaaccctggaggaaaccaggagcggatctgtctgactactttaactacggcttcaatgaa
gacacatggaaggcttactgtgaaaaacagaagagactgcgcatgggccttgaggtctcc
actgtcggctcagtgacaagcaagatcactgttcagcaaggcaggacgggcaatgagaag
gacatatccagtttgcctgttcacacctccaaaccagacttcacatctcctgtcagtctg
tacaagcctgctgtcagtcaggtcaccaggatctctccccctcagtggcctggcccacct
gttcaggacatgtcctattatacgaagcccagtggtactatagatgtgattggcggaggg
acagccaccatcagcagggttgaagggcgacgcagacacaatctagaaggcaacaatatc
caggtgatcgctgaacaatcagacgccgagccgactccagctaaaattcctactttcttc
cctcccggaccgcttcctccaaacatacccccacctccgttcctccctccaccacccaac
gtcaacactgcacccccactcatccccccacccaggttgcccattactgtccctcctcct
ggttttcctcctccacccagcgggccccctccttcaatcatccccacaatggacagtagc
catggtggaggttatgatggacgctctgtccctccatacccattccctcaaggtgcatac
cctccacccattgctggaggtgtgcctcctccttggccccccataatggacaactctaaa
ccctgggactactattctcgtcgagacgacaagagagagaaggaaagagaaagaccccga
gagaggacacatgagagggagagagagagggaacacagtccttcagctatcggctacacc
agtgacgaggagcggtatcgttaccgtgagtaccaggagcgtggttatggagagcgtcat
cgtgaccggtcgagccgggagaaagaggaaagacacagagagagacggcaccgagagaaa
gaggagggacgccacaagtcctctcgcagcagcagtagcaggaggaggcacgacagcgag
gagggcgacagccaccggaggcacaaacacaagaagagcaagaggagcaaggagggcaag
gaggccagcgaggacatcagcgcagaccaagagaaccaggaagccatggagtag
DBGET
integrated database retrieval system
