Epinephelus fuscoguttatus (brown-marbled grouper): 125886252
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Entry
125886252 CDS
T08419
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efo03041
]
125886252
Enzymes [BR:
efo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125886252
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125886252
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125886252
NCBI-ProteinID:
XP_049428249
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Position
LG3:10474360..10487051
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AA seq
651 aa
AA seq
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MRGGSSYGDRDRDRGRDRPRFGPMSSRSGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
GEHPEVQRMSQYDQEEFRRKKEITVRGSGCPKAVTAFHHAQFPQYVMDVLLQQNFKEPTA
IQAQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDHIQ
INIGALELSANHNILQIVDVCMETEKDQKLFQLMEEIMAEKENKTIIFVETKKRCDDLTK
RMRRDGWPAMCIHGDKSQPERDWVLGEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SCSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQLVESGR
GGGGGGRMRYRGSSSNNPNLMYQGECDRRMHGGGGSKDSRGGFGRDSRNSRDGDRSTSSA
SSSYRDRSRDHRNSYNSGSDQYQSYNSGGGYNTRSGGQSGGGQDQSNQQQGQFGQPPAPP
PPPPQSSGGLQPLMAQQFVPPQPGLMGFMGQPPFPFASPPPPPPGPPPPRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggttcttcctacggagacagagacagagaccgcggacgagacaggccacgg
tttgggcccatgagcagccggagtggacctccacctatgaagtttgggaatccaggtgag
cgtctccgtaaaaagaggtggaacctggatgagctgccaaaatttgagaagaacttctat
ggtgaacatccagaagtccagcgcatgagtcagtatgatcaggaagaatttcgcagaaag
aaggagatcaccgtcagaggctccggctgtccaaaggcggtcactgcctttcaccatgca
cagtttcctcagtatgtgatggatgtgctgttgcagcagaacttcaaggagccaacagca
atccaggctcagggctttcctgtggccctgagcggcagggacatggtggggattgcccag
actggctccggaaagacactggcgtatcttcttcctgctattgtacacatcaaccaccag
ccctatctggagaggggagatggcccaatttgtctggtactcgctccgaccagagagctg
gctcagcaggttcaacaggttgcatatgactacggcaagtcttcccggatcaaaagcacc
tgtgtctacggtggagcacccaaaggaccacagattcgagatctcgagaggggtgttgag
atctgtatcgccacccctggtcgccttattgacttcctggagagtgggaaaactaacctg
cggcgctgcacctacctcgtgctggatgaggctgaccgcatgctggacatgggctttgag
ccacagattcgcaagatagtggaacaaatcaggccagacagacagactctgatgtggagt
gcaacctggccgaaggaggttcggcagcttgccgaggacttcctgagggaccacattcag
attaatattggtgctctggagctcagtgccaaccacaacatcctgcagattgtcgatgtc
tgcatggagactgaaaaggaccagaaactttttcagctgatggaggagataatggctgaa
aaagagaacaaaacaatcatctttgtggagacgaagaagcgttgtgatgatcttaccaag
aggatgaggcgggacgggtggccagccatgtgtatccatggagacaagagccagccagaa
agagactgggtactcggagaatttcggagtggcaaagctccgatactgattgctacagat
gtggcctctcgtggtctggatgtggaagatgtcaagttcgtcatcaactatgattatccc
agctgctctgaggattatgtgcaccgtattggacgtacggcccgcagtaccaacaagggc
actgcctacacattcttcaccccagggaatttgcgccaggcgcgagaccttgtccgggtg
ctagcggaggcccggcaggccatcaaccctaaactgcttcagctggtggaatctgggcgt
ggtggaggaggaggtggcagaatgcgttaccgtggcagcagctccaacaaccctaacctc
atgtatcagggagagtgtgatcgccgcatgcacggtggtggcggcagcaaggatagccgc
ggtggcttcggccgtgatagccgcaacagccgtgatggagaccgctccacttcctccgcc
tcttcctcctacagggacagaagccgggatcacaggaacagctacaactcaggctcagat
cagtaccagagttacaacagcggcggaggctacaacacgcgcagcggaggccagtctggg
ggaggtcaggatcagtctaaccagcagcagggtcagtttggccagcctcctgctcctcct
cctcctcctcctcaatcatcaggggggctgcagcctctgatggctcagcagtttgtacca
ccacagccagggcttatgggcttcatgggtcaaccgcctttcccttttgcttctccaccc
cctcctcccccaggccctccacctccccggaagtag
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