Epinephelus fuscoguttatus (brown-marbled grouper): 125886397
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Entry
125886397 CDS
T08419
Symbol
dchs2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125886397 (dchs2)
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Cadherin related
125886397 (dchs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
CADH_Y-type_LIR
PepSY
Motif
Other DBs
NCBI-GeneID:
125886397
NCBI-ProteinID:
XP_049428541
LinkDB
All DBs
Position
LG3:25796748..25839098
Genome browser
AA seq
3277 aa
AA seq
DB search
MWRGAMGRKNAATWLLRTVFLSLLCAHSLGQVFNLTLSVKEGLPAKTIVGDLGAGLSRPS
TGFFISESRDSYVFRDLEIDADTGIISTAVVLDRESRDKYEFVAATLTGEMIKVKLQVED
VNDHSPVFPSKEVDLEISELSPPGSRFQLEGAKDEDEGEFGTQGYRITDSDMGQLFHLEY
RSGSENHPTLDLILTSKLDRETQDFFSFPIEAFDGGIPARTGTLQVNIHVLDENDNPPAF
NQTEYHAALPENALLMTSVCQVHATDLDLGNNGHITYEINRRQSDPNEVFSIDENSGVVY
LNKPLDYETQAFHELIISARDNGAQPEYSSTFVGVKVLNVNDNSPTINVLFLSETGDAVV
SEAAAVGDYVARISVSDPDFRDEMITVTLEEEDGKFTLKQTDDFLYALCVNAELDREEKD
LYELKVQATDFGSPPLSSEMVLLLRVADTNDCHPVFEKDVYIISISEDAPQGSSLIQIRA
RDADEGVNSGVKYSILKSNHDSLLSIDPESGLVTTAAALDRETQMEVWFLVVAADGGEPA
LSSTATVTVLVEDVNDNEPVFQQQLYNVSIPEHSDVGSCFLQVVATDADSPEFGTLLYSL
SDGFDMQDQHPLFKIHPQTGELCVSQDIDRDSGQMVHDILIKAEDPGGLSAQTYVHIEVE
DLNDNAPVFNPDEYTMSISSHAQPGTEILNVIATDRDSGRFGQVTYDVVPGDMSSLFALD
QQTGMLLLSSTLTHLGAASVKLSVTAQDGEGLTSVKPAEVTINVLQSAQAPAVFQRSRYT
FTVPEDAPPGTPVGTVVATNPADSLDSVSYRISSGDPQGLFSVHPKSGLISNIKPLDHES
QPYALLVLQSYTDTSPVYSTTQVNITIADINDNSPVFPKLSDTITVSQNTLPGTVLFIAH
AHDHDSGANGRVQYHLKSTRDGPFVVDHNLGTVTLNQSLQVDHQQRYSLEIVAKDEGDPS
QSSTLTLTVNVDRTVAEDSLAFETLVYQVEIGEGYRKDSRVIQVRAHRHRGAHTSNSGLT
YSLEAEAGFPPAPFRIHPKTGWLYLSNNLDYESESMFRFRVLATAREASLENMTATATVI
VLVLDINDNAPVFSSEVYYFTVSEGSSPQGLVGIVHATDKDSGKNAQLSYILLTDGKFFR
INAKTGEIINWVALDREQHSQHSLKVMVTDQGRPHLNATATVHILVMDINDNTPQFTHLP
ASKELNVQIWAGLSAGSFVTNMFAKDLDAGENGTVTFSMVTDDLEDEGFGHFEIDSESGD
IRTTELFTQGAASYYTLRVTAKDGGATPLEDTAVIHVQVHGLEALYGHSDHQIVRRFTVK
EDTEPATVIGSASVSYEGRFHYSISEGDGNIHFGIDGSSGDIYINQPLDYESAMQYFLMV
RAEDVGHAPGVNVSVLVSVIVEDVNDHTPWFPDKLVMFGLWEDAAVGSLAFAFHARDADG
TFANSALRYSLTFDPELSRSSSRFPFQINPHTGSLTITAPLDRETTPSFAFTVTATDQEK
RKAERKQTSVTAQVFLLDVNDNRPVFVSADTVQVMEDAEVGSLLHHFVAIDGDLVENGVV
SYVIIAGNKRGFFTLEEKTGLLFLSAPLDYETQRFHRLTIRAVDHGMPSLSSTQTLTVEV
GDVNDQTPVFSQSVYNASVAENRDPGEAVIRVSATDKDSEENAVVWYSLLPGPGYELFSI
NPYTGLITTTSYLDREQQHHFTLRVQARDSGTRPLSGTATVLCAVLDDNDNPPEFMQSSF
QISLPENLPPGVVHTAQASDPDHGENGTIHYSILGEDYRGRFTINSHTGAVSTTQVLDRE
DKQNYTLTILAHDYGPTPLSSSTQLQLVLLDQNDNIPSFTRKSYHASISEGLPAGAEVLH
VSAFDPDEGSNGEVTYSLTEDSSQGAFSVDAFTGLIRTTRSLDRESRAQYTLRAVATDGC
TQGPLSSVASVTIQVEDVNDNVPVCEQNPMNAWVSMRTLPNQIVTTVTATDGDQGDNGTI
HFMLSDEENLFDINSASGEISLRRRVRAGFSGRKLQVVVSDRGRPALISTCLIFIHLKGE
HEGLQFTNKVYNTTVKENSRAGTWIAKVEASDQSNSRQRITYTIFSGNENHIFSINRHTG
EIRVQKDNSLDFEVSPHIQLVVLADSGLQTAHCRVSISLLDMNDNAPVFEYSNYRTAVWE
GQVHNTYIMQVFASDADSGMNGQIEYSIVSGNSNEAFVLDSVRGILATNVLLDREITPSY
KLVLQATDRGNPPLSTTTTIRVQVVDVNDNSPTIPPMEPVVIAENLPAGYMVTQVTANDV
DLSSTITYSFSDNSSTNAPFAIDRYTGVITLTRALDYEEETEYTLTVWASDSLHQTTGEV
KVQVLDVNDNAPVFTKVSYQVELSELVSADTLVLSVSATDRDSGLNGKITYRLLSSPLQG
FYMEPENGSVFTNKPLKAITNSNLIHLLVEAKDAGDPVQSTLTSIDVLILDTNDHAPLFH
QDMYTLTVPEDTPTDTSLLTLSAEDQDWSPENTHLDYSIIGGNEEKRFCLEVKMVQVENQ
MRNVGKLVLCNSLDRETTESYALTVSVSDRGTPPLNNSAVVMVTVTDCNDNAPVFSSTGY
HAQVSENSHVGAKLVQVSAQDPDLGINGLLRYDIVSGNSKGHLKLDPHSGVLVVNHSLDY
EEDSKYTLTIQASDGGESSEERKVAFTVVFITVLDVNDNTPYFMFPVVNCSVLENLPAFT
HTCSVHAVDNDLGPYGQLTYSIVSSCFMDYGSGSPEKKEAFAIDPLTGDIHTRQTFDYER
ESEYCFVVEARDKGDKAATVRVQVIIKGVDEFSPVFTQKQYHFLLPQNAKPGETVGYVMA
MDHDGGVDGVVEYSLVKSSPFFSINKTIGSIFVSGPVYRRRGSHASEDMVELVVSAGSPR
VASRTTACLVYVNISSSAEALTGVPLDAHMLSLSVSLIMFLFVLLIFVGLVLRYKIKEAA
IKKAAAIAANLNHGTGSFGRSNSQRSISLQEIKRPSILVTKRDVSHPYNHNPSDSSGRGS
AEGETAEDQEIKWINQHPCRKRDESVPGNQAAEIPDSALPGDNISCHSVDVGPQHILSIN
KRLVSGMASTESLHHFKEEGGGEGLLPAILRVRDLEESMRTNGYAPLSEAQASADSLSSL
VCLEEQLQGSYSWDYILDWEPRYQTLASVFTDIGMLPDEELQGGREDLAAEASCLMHPPP
LITGVAQPGIRTVPPRKPGRVPSLRRKPSFPKYAYSPLARNTGLTPSAMTPNFSPSLSSL
TIRTPSASPVVSETGVGGIKLDSGPLTASLLEAEIQV
NT seq
9834 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaggagcaatgggtcgcaaaaatgccgcaacttggctccttcggacggtcttc
ctgtcgctgctttgcgcgcactcgctcgggcaggtgttcaacctgacgctgtctgtcaaa
gagggtttgcctgctaaaaccatcgtcggagatctgggagcggggttaagcaggccaagc
actgggttcttcatctcagagagcagagattcttatgtgttcagagacttggaaatagac
gcggacacggggatcatctccacagctgtggtcctggacagagagagcagagataagtat
gagtttgtggcagccactctcacaggtgagatgataaaggtgaagctgcaggtggaggat
gtgaatgatcactcacctgtgtttccctcaaaggaggttgacttggaaatatcagagctg
agccccccggggagtcgatttcagcttgaaggagctaaagatgaggatgagggtgagttt
ggtacccagggatacaggatcacagacagtgacatggggcagttattccacttggagtat
cgcagtggatctgagaaccaccccaccctggatctcatcctcaccagcaaactggacaga
gagacacaggacttcttctccttccccattgaggcctttgatgggggcattccagccagg
acggggactcttcaggtgaacatccacgtcctggatgagaacgacaaccctccagcgttc
aaccagactgagtatcacgccgcgctgcctgagaatgctctgctcatgacctctgtgtgt
caggtccacgccactgacctcgacctgggcaacaacggccacatcacttatgagatcaac
aggcggcagagtgacccaaatgaggtcttctcgatcgatgaaaacagcggggtagtgtat
ctcaacaagccccttgattatgagactcaggcttttcatgagttgatcatcagtgcgaga
gataatggggctcagcctgagtacagcagcacgtttgtgggtgtgaaggtgcttaatgtc
aacgataacagtcccaccatcaatgtgctgtttctcagtgagacaggagatgcagtggtg
tcagaggcagcagcagttggggactacgttgcccggatttcagtgtcagaccccgacttc
agggatgagatgattactgtcacacttgaggaggaggatgggaagttcaccctgaagcag
acggatgattttctgtatgctttatgtgtcaatgcagagttagacagggaggaaaaggat
ctctatgagttaaaggtgcaagccacagattttgggagcccacccctgagcagcgagatg
gtcctcctcctgagggtggctgacaccaacgactgccacccagtctttgagaaggacgtg
tacatcatcagtatatctgaggacgctcctcaggggagttccctcatccagatacgggcc
cgagacgcagatgaaggcgtcaactcaggtgttaaatactctatcctcaagtccaaccat
gacagcctgctcagcatcgaccctgagtcgggcctggtcacaacagctgcggctctggac
agagagacacagatggaggtttggttcctggtggtggcggctgatggaggggagccggct
ctgtcatccacggctacagtcactgtgctggtggaggatgtcaatgacaacgagcctgtg
ttccagcagcagctgtacaatgtgtccataccggagcacagtgatgttgggagctgcttt
ttacaagttgttgccacagacgcagacagccctgagttcggcacactgctctactctctg
tctgacggctttgacatgcaggaccagcaccctctcttcaaaatccaccctcagaccgga
gagctgtgtgtctcccaggatatcgatcgagactcggggcagatggtccacgacattctc
atcaaagctgaagatccaggaggcctgagcgctcaaacgtatgtgcacatcgaggtagaa
gacctgaatgataacgctccagtgtttaaccccgatgagtacaccatgagcatcagcagc
cacgcacagcccggcaccgagatcctcaatgttatcgccactgaccgagattctggcagg
tttggacaggtcacgtatgacgtcgtccctggtgacatgtccagtttgttcgcactggat
caacaaacagggatgctcctcctgagctccactctgacccacctgggtgcagccagtgtg
aagctgtcagtaacagcacaggatggggagggtttgacctcagtcaagcctgcagaggtc
accatcaatgttttacagagcgcccaggctccagctgtgttccagaggtcacgctacacc
ttcacagtgcctgaggacgcaccgcccgggactcctgtggggacagtggtggccacaaac
ccagcagactctctggattcagtctcctaccgaatctcctctggagatcctcagggtttg
ttctctgttcacccaaagtccggcctgatcagcaacatcaaacccctggaccatgagtca
cagccgtacgccctgctggttcttcagtcctacactgacacctctccagtttatagcacc
acccaggtcaacatcactatcgctgacatcaatgacaactcacctgttttccccaaactc
agcgacaccatcacagtgtcccaaaacacgctcccagggacagtgttgtttatcgctcat
gcacatgatcatgacagtggcgccaacgggagggtgcagtatcacctgaaaagtaccaga
gatggtccgtttgttgttgaccacaacctcgggacagttacgttaaatcagagtttacag
gtggatcatcagcagaggtacagcctggaaatcgtggctaaagatgaaggagacccttcc
cagagctccacactgaccctcacagtcaacgtggaccgcaccgttgctgaagacagcctc
gccttcgagacattggtctaccaggtggagataggtgagggctacaggaaagattcgaga
gtcatccaggtgagggcgcaccggcaccggggagcacacacgtcgaactcaggcctcacc
tactccttagaggcagaagccggatttcctccagctccgtttcggattcacccaaagacg
ggatggttgtatctctccaacaatctggactatgaatcagaatccatgtttcgattccga
gtgttggccacagccagggaggcctcgctggagaacatgactgctacggccacagtgata
gtgctggtgctggacatcaatgacaatgctccggtgtttagcagcgaggtctactacttc
actgtgtcagaggggtcgtcgcctcaaggcctggtgggaatagtccatgccacggataag
gattctgggaaaaacgcccagctgtcctacatcctgctcacagatgggaagttctttcgc
atcaacgctaaaacaggtgaaattataaattgggtggcgttggatcgagagcagcacagc
cagcacagtctgaaggtgatggtgacagaccagggccgccctcatctcaatgccaccgcc
accgttcacatcctggtcatggacatcaatgacaacactccacagtttacacacctgcct
gccagcaaggagctgaatgttcagatatgggccggtctgtcagcaggatcctttgtgacc
aacatgtttgccaaagatttagatgcaggagaaaatggaaccgtcaccttctcaatggtc
acagatgatttagaggatgaggggttcggacactttgagattgacagtgaaagtggagac
atcagaacaacggagctgtttacccaaggcgccgcatcgtactacactctgagagtaact
gccaaggatggtggagccacacctctggaggacactgcagtcattcatgtacaggttcat
ggattagaggctctgtacggccactctgaccaccagattgtgaggcgttttacggtgaaa
gaggacacggagccagccactgttatcggctctgccagtgtttcatatgaagggagattc
cactactccatctctgagggcgacggcaacatccactttggcatcgacggctcctctggt
gacatatatatcaaccagccgctggactatgagtccgccatgcagtacttcctcatggtc
cgagctgaagatgtaggacacgctcctggtgtgaacgtgtctgtgctggtcagtgtgata
gtggaggatgttaatgaccacacgccctggttccctgacaagctggtgatgttcggcctg
tgggaggacgctgcggtcggatcgctggcgtttgcttttcatgccagggacgccgatggg
acctttgcaaacagtgccctccgctactctttgacctttgaccctgagctcagcaggtct
tcatcacgcttcccttttcagatcaaccctcacacagggagcctgactataacagctcct
ttagatcgggagaccacccccagctttgccttcactgtgacagccaccgaccaggagaag
aggaaggccgagcgtaagcagacgtcagtgacggctcaggtcttcctgctggacgtgaat
gataaccggccggtgtttgtatcagccgacacagttcaggtgatggaggacgcagaggtg
gggagtctgctgcatcattttgtggccatagatggagatctggttgaaaacggggttgtg
tcctacgtcatcatagctggaaacaaaagaggattcttcacactggaggagaagacaggt
cttctgtttctctcggcccctctggactatgagacacagcgtttccaccgtctaaccatc
cgtgcagtcgaccatggcatgccctcgctctcctccacccagactctgacggtggaggtg
ggggacgtgaacgaccagacgcctgtcttcagtcagagtgtctacaatgccagtgtagca
gagaacagagaccctggagaagctgtgatcagggtctctgccactgataaagattcagag
gagaatgctgtggtgtggtacagtcttttgcccggccctggctacgagctcttcagcatc
aacccttacaccggtctgatcaccaccacctcctacctggacagagagcagcagcatcac
ttcactctcagagtccaggctcgcgacagtgggacacggcctctgtcgggtacggccacg
gtgctgtgcgctgtgcttgatgacaatgacaaccctccggagttcatgcagtcgtccttc
cagatcagcctgccagagaacctgcctcctggggtggtccacactgctcaggcctctgat
ccagaccacggagaaaatggaaccatacactactccattttgggggaggactacagaggc
cgcttcaccatcaacagccacacaggtgctgtcagcaccacacaggtccttgaccgtgag
gacaagcaaaattacacactcaccatattggcccatgactatggccccaccccactcagc
tcctccacccaactccagctggtgctgctggaccagaatgacaacatcccctccttcacc
cgtaagagctaccacgcctccatcagtgagggcctacctgcaggagcagaggtcctgcat
gtaagcgcctttgatcctgacgaggggtccaatggagaggtgacctactctctgacagag
gacagcagccagggggccttctcagtggacgctttcacaggactgatccgcactacaagg
tctctggatagagagagcagagcccaatacaccctcagagctgtggctactgacggctgc
actcaaggaccactgagctctgtggcatcggtgaccatacaggtggaggatgtgaatgac
aacgtaccagtctgtgagcagaatccaatgaacgcatgggtttctatgaggactctacca
aaccagatagttaccacggtgacagcaacagacggtgaccagggtgacaatgggacgata
cattttatgttgtctgatgaggaaaacctgtttgacatcaacagtgcgtcgggggagatt
tcactgagaagacgagtgagagcaggtttctctgggaggaagctgcaggtggtggtttca
gaccgaggacgacctgctttaatctccacctgcctgatcttcatccatctgaagggagaa
cacgaaggactacagttcacaaacaaagtgtacaacactactgtcaaggagaacagtaga
gctggtacttggattgcaaaagtggaggccagtgaccaaagcaacagcagacaaagaatc
acatacaccatatttagtggcaacgagaatcatattttctccatcaaccgtcacacgggt
gagatccgtgtacagaaagataactctttggactttgaggtgagccctcacatccaactg
gtggtgctggctgacagtgggctgcagacagctcactgcagggtctccatcagcctgctg
gatatgaatgacaacgcaccagtgtttgagtacagcaactacaggacagctgtctgggag
gggcaagtgcacaacacatacatcatgcaggtgtttgcgtctgatgctgacagcgggatg
aacgggcagatcgagtactccattgtatccggtaactctaacgaagcattcgtgttggac
tctgttcgtgggattcttgctacaaatgtcttactggaccgtgagatcaccccctcatac
aagctggttctgcaggccacagacagggggaaccctccgctcagcaccaccaccaccatc
agggtccaagtggtggacgtcaatgacaacagccctaccatcccccccatggagcctgtg
gttatagcagagaatctgccagcaggttacatggtcacccaggtgactgcaaacgacgtg
gacctgagttcaaccatcacctacagcttctcagataacagcagcaccaatgctccattt
gctattgaccgatacactggtgtgatcaccctgactcgagccctggactatgaagaggag
acagagtacacgctgacagtctgggcatctgattccctccaccagaccacaggagaggtc
aaagttcaagtgcttgacgtcaatgacaacgctccagtcttcaccaaggtctcctaccag
gtggagttgtcagagttggtttcagcagacacgttagttttgtctgtgtccgctaccgac
agagactctggactcaatggaaagatcacctacagactgctttcatctcctttacaaggc
ttttacatggagccagagaacgggtctgttttcactaataagcccttgaaggccatcaca
aacagcaacctgatccaccttctggttgaggccaaagacgcaggcgatcctgtgcagtct
acactcacctctatagacgtgctgattctggacaccaacgaccatgcacctttgtttcac
caggacatgtacacactcaccgtcccagaggacacgcccacagacaccagcctactgaca
ctgtctgcagaggaccaagactggagccctgagaatacccatttggactacagcataatc
gggggaaatgaggagaagcgattctgtctggaagtaaaaatggttcaagttgagaatcag
atgagaaatgtaggaaaactcgttctgtgtaactctttagaccgtgagaccacagagagc
tacgcactaacagtgagcgtgtctgatcgaggaacgcctccactgaacaactctgctgtc
gtcatggtgactgtgacagactgcaatgacaacgccccagtcttttccagcacaggatac
catgcacaggtgagtgaaaacagccatgtcggtgccaagctggtccaggtcagtgctcag
gatcctgacctgggaatcaacggcctgttgcggtatgacattgtctcagggaacagcaaa
ggtcacctcaagctggaccctcattctggtgttctggtggtcaaccactcgcttgactat
gaggaagactcaaaatacaccctcaccatccaagcatctgatggaggtgaatcatctgag
gaacgtaaagtggcttttacagtggtcttcatcacagtgttggatgtaaatgacaacact
ccgtactttatgtttcctgttgttaactgttctgtgctggagaacctcccggcatttacc
cacacctgttctgtccatgctgttgacaatgacttaggcccctacggccagctcacctac
tctattgtgtcctcctgcttcatggactatggcagtggcagccctgagaagaaggaagcc
tttgccattgaccctctaacaggcgacattcacaccagacagacctttgactacgaacgt
gagagcgagtactgctttgtcgtggaagccagggacaaaggcgacaaagcagctacagtg
agagtgcaggtgatcatcaagggagtggatgagttcagtcctgtcttcacccaaaagcag
taccatttcctgctgccacaaaacgccaagcctggagagacagtcggatacgtgatggcg
atggaccatgatggaggggtggacggagtggtggagtactcacttgtgaagtcatcgccg
tttttctcaataaacaaaacaattggttccatttttgtgtcaggacctgtatatcgcaga
agaggcagccatgccagtgaggacatggtggagctagtagtgtccgcaggtagtcccaga
gtggcatccaggaccaccgcttgcctagtttacgtcaacatctctagctcagcagaggca
ctcactggggtgcctcttgatgcacacatgctcagtttgagtgtctcactaattatgttc
ctttttgtcctcctcatttttgtgggcttggttctcagatacaagatcaaggaggcggca
atcaaaaaggccgctgccattgctgcgaacttaaaccacggcacaggctcgtttggtaga
tccaatagccaaagatccatttctctgcaggagattaaacggccaagcatcttggtgacc
aagagggacgtatcgcacccatacaatcacaatccttcagactcaagtggccgtggatca
gcagaaggtgaaacagctgaggaccaggagatcaagtggataaatcagcacccctgccgt
aaaagggacgaatctgtgccaggcaaccaggccgcagagatcccggactctgctctgcct
ggagacaatatctcctgccactctgtcgatgtagggccgcagcatattttatccatcaat
aaacgtttagtgtcagggatggccagcactgaaagcctccaccactttaaagaggaggga
ggaggtgagggactacttcctgcaatacttagggtgagagatttggaggagagcatgagg
acaaatgggtatgctcccctctcggaagcccaggcctctgcagattccctctcttcactg
gtgtgtctggaggagcagctgcagggcagctacagctgggactacattttggactgggag
ccacgctaccagactctggcctccgtcttcaccgatattgggatgctccctgacgaggag
cttcaaggcggccgtgaggacttagcagcagaggcaagctgtctcatgcacccaccacct
ctaataacgggggtagctcagcccggcattaggactgtacctccacgaaagccagggcgg
gtcccaagcctgagaaggaagccctctttccccaaatatgcatattcccccttagccagg
aatacaggacttaccccttcagccatgacacccaatttctccccatccctttcttctctc
accattaggacccccagtgcctcaccagttgtctcggagacaggggtggggggaatcaaa
cttgactcagggcctctaactgcaagcctattggaggctgaaatccaggtgtag
DBGET
integrated database retrieval system
