Epinephelus fuscoguttatus (brown-marbled grouper): 125886829
Help
Entry
125886829 CDS
T08419
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
125886829 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125886829 (lsp1a)
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125886829 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
125886829
NCBI-ProteinID:
XP_049429118
LinkDB
All DBs
Position
LG4:46033914..46080714
Genome browser
AA seq
572 aa
AA seq
DB search
MSNALLRRNSSKQGLQNLMRLTAQRSMEDAEEVERERRRRAREASRWNNEASLAGESSQE
NETTAQESMYDGELKPHSSPSLEEDEGFSDWTQRRERRRQQRLQELSQAGEEDEEEEEHM
INKAVPVKTVQASVTSSSRLQRQEQAEEEEEEDRARVELKRRKEREEEAIRAERARREKE
REEEEEKRKREEVMTRRREIQRLNPEVEKRKEVKISYTSKVVLHQEPKHSNTNGDATKEE
VTSYKNNKTKHSTSRGAEPEEAEAILETEQRLEKIRQSLQQKECQELEHLRHRQVEAEQE
LEELKRRREERRRVRVEEERRREEEEQQRLAKEEEERRQMKEDIERRRMEAAERMKILSV
SSSDGDETFSPFSPKTSTHKITERTESLNRSLKKSNSFKKTQPLVLLAKIDDKLEQYTHA
VENSQETRAVKASPPDLHSSPEVVISKKNLFEAGEVWSQSPTKAATCKDTEGLKVGVANR
ITQWVKGPSDSSRQSLSKPADVRPGDVMQKKNMWEIIGDSTERPRQRPKGSAAGKKYKFV
VTGHGKYEKIPVDDENGGEFTNGESDLYHDNY
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctctgctgaggagaaactccagcaaacagggtttacaaaacctgatgagg
ctgacggctcagaggagcatggaggacgctgaggaggtggagagggagcgccgtcgtcga
gccagggaggcctcacgctggaacaacgaagcctcgctggccggagagtcttcacaggag
aacgagacgacggcacaggagagcatgtacgacggtgaactgaagccacacagctctcca
tctctggaggaggacgaaggcttcagtgactggactcagcgcagagagagacggaggcag
cagcgcctgcaggagctcagccaggcaggcgaggaagacgaggaagaagaagagcacatg
ataaacaaagctgtacccgtaaagaccgtccaggcttcggtcacgtcctccagccgactc
cagagacaggagcaggcagaggaagaggaagaagaggacagggccagggtggagttgaag
aggaggaaggagcgtgaggaggaggccatccgggctgagagagcaaggagagagaaggag
agggaggaggaggaggagaagaggaagagagaggaggtgatgaccaggaggagggagatc
caaaggctgaatccagaggtggagaaaagaaaagaagtcaaaatctcctacacatctaag
gtggttctccaccaggagccaaaacacagcaacaccaacggagacgcaaccaaagaggaa
gtgacatcatacaagaacaacaagacaaaacactccaccagcagaggagcggagccagag
gaggcggaggccatcctggagacggagcagcgcttggagaagatccggcagagcctccag
cagaaggagtgccaggagctggagcatctgagacacaggcaggtggaggccgagcaggag
ctggaggagctgaagaggaggagggaggagaggcgtcgagtgcgggtggaggaggagcgt
cggagggaggaggaggagcagcagcggctggccaaagaggaggaggagaggaggcagatg
aaggaggacatcgagaggaggaggatggaggcggccgagaggatgaagatcctgagtgtg
tccagctcggacggagacgagacgttcagtcccttcagccccaaaacttctacacacaag
atcacagagagaactgagtcgctgaaccgctcgctgaagaaaagtaacagcttcaagaag
acgcagcctctcgtcctgctggccaagatcgatgacaagctggagcagtacacccacgct
gtggagaactcccaggagacccgggcagtgaaggcatcaccacccgacctgcacagctca
cctgaggtcgtcatctccaagaaaaacctgtttgaggccggagaggtttggagtcagagt
cccactaaagcagccacctgcaaggacactgaggggctgaaggtgggcgtggccaacagg
atcactcagtgggtgaagggtccgtctgacagcagcagacagtcgctcagcaaaccagca
gacgtgagacctggagatgtgatgcagaaaaagaacatgtgggagattattggagactcg
acagagagacccagacagagacccaagggctcagcagctggtaaaaagtacaaatttgtg
gtcactggtcacggcaaatatgagaagatccccgtggatgatgagaacggaggagagttc
actaacggagagtccgatttatatcatgataattactga
DBGET
integrated database retrieval system
