Epinephelus fuscoguttatus (brown-marbled grouper): 125886843
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Entry
125886843 CDS
T08419
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125886843 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125886843 (myo5c)
04131 Membrane trafficking [BR:
efo04131
]
125886843 (myo5c)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125886843 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125886843 (myo5c)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125886843 (myo5c)
mRNA cycle factors
P-body specific factors
125886843 (myo5c)
Membrane trafficking [BR:
efo04131
]
Others
Actin-binding proteins
Myosins
125886843 (myo5c)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125886843 (myo5c)
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125886843 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
AvrPto
Motif
Other DBs
NCBI-GeneID:
125886843
NCBI-ProteinID:
XP_049429133
LinkDB
All DBs
Position
LG4:complement(28525137..28543008)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWKSAEIIRDFHIGDNVLELLLEDGTEHYYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKELHVYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPVTEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVIFQADDERNYHIFYQMCSCADLPEFKNLRLLGADKFQYTCMGGEIAIEGVD
DKKDMEETRRTFSLLGLNEDFQFNVFKVLAAILHLGNAKIKDSGDGKSSVPPSDPHLAVF
CELLDVSTEQLARWLCHRRIVLVTETVVKPVPKERAVNARDALAKQIYAHLFDCIITRIN
TALKVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRASKFPFLANFFREEEQSTVS
SKGVKVRPARPGVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEADVRDKKQTCKKV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGASVTIQKHFRGWSQRRKYLRMR
QAAIILQQYIRGEKTIRKTVTAATLKQGWASVVIQKYWRGYRMRQIFQVVRLASITIQAF
TRGWMARKRYKKMMEEQKALILQKYARAWLVRRRFQTMRRLVLNVQLSYRVQTLKKKIEE
QNKENRGLMERLTSLANSHAQTVDRLQVLEVQLEKSTNQKASLEAREKKAKEDASVTTAQ
LKKEIDALNLEKQNLEKKFEASTKEAQESFDEIKRGLQEEKEYEARLRKIAENNTEIQRH
DHEREVEALKEEIKRLKEERVSLQRKIEEADRANSDLQEQNIQLTKHIKVIPELRRDLNN
LQNQRNNMDRRMKQQSEQARAKMNDITRQLLGGVVEQEVLLGLTPDDSEKIYEVEDLLTA
FDGLQKATRILESHQREQKESYETQVEGLKLKMDHLQNENSKLQNLFQEKSNVNESIRQE
VSRLSSENSVIPELKLQASELQRQKQELEVRIEEQSRELAEKVEEITNTLQRKIKEESSQ
RRHFEEKAEELEELKRELHGKVEELEEENDHLKRQLLMEMEAKSKLRQETSQLTAENMDF
EEQLDQKDRLIRKLQNQIKSLETSQKAVKQTSAPAIPKDYLGMLEYKREDESRLIQNIIL
ELKPKGVVVSMMPGLPANILFMCIRHADYLNDEVKLKSLMTAIINGVKKVIMSYHKDFEL
LSFWLSNTYQLLNCLKQYSGEEEFMKQNTPRQKKNCLKNFDLSEHRQILSDMAIQIYHQF
ISVMEKSLAPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETHTISSIIQQLSVFH
STMSQHGMEQGLIKQAVKQMFFLIGATALNNIMLRKDMCSCRKGMQIRCNISYLEEWLKE
KQMQSSNAMDTLRPLSQAAWLLQVNKSTDDDANEITEKCTELNPVQIVKILNSYTPIDDF
EKRVSSSFVRKVQSLLHDRDGSTQLMLDSDYRFQVTFPFCPSSQALELLQVPSSLHLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggagctgtacaccgagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgagattatcagagactttcatattggggataatgtccttgaactg
cttcttgaagatggcactgagcactactaccctgttgacccatcaaagccacagctccct
ccactccgcaaccctgacatcttggtgggggagaatgacctcactgccctcagctacctg
catgaacctgcagtcctgcataatcttaaagttagatttgtggagtccagaatcatctac
acctactgtggtattatactagtggctgtaaatccatacaaagagcttcatgtctatgga
gatgcagtcattcatgcctactcaggccaaaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatt
gtcagtggtgaatctggagccggtaaaactgtgtctgctcgatacgccatgagatacttt
gctgttgtgagcaagtctggaagtaagactcgtgttgaagacaaagtcttggcttccaac
cccgtaacagaggcaattggaaatgcaaagaccaccaggaacgacaacagcagccgtttt
gggaaatacacagagatcagctttgacaggaggtaccggatcatcggagcgaacatgagg
acgtatctccttgagaaatccagagtcatttttcaggcagacgacgagcgaaactatcac
atattctaccagatgtgttcctgtgctgacctgccagagttcaagaatctgagactgttg
ggtgcagataagttccagtacacctgcatgggcggtgagatcgctattgaaggtgtagat
gacaagaaagacatggaggagactcgacgcaccttctcactgctggggctgaacgaggac
tttcagttcaatgtgttcaaagttctggcggccattctgcatttgggaaatgcgaaaatc
aaagactctggagatggcaaatcatcagtccctcccagtgatccacacctggcagtcttc
tgcgagctgctggatgtgagcacggagcagttggcacgctggctgtgccatcggaggatc
gttctggtgactgagacggtggtgaagccggtgcccaaagagcgggcggtaaatgccaga
gatgccctagccaagcagatctacgcccatctgttcgactgcattattaccaggataaac
acagcattgaaggttccaggaaagcaacatgctttcattggtgttctggatatttatggc
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactacgcaaatgagaag
cttcaacaacagtttaacttgcatgtgttcaagctggagcaagaggaatacatgaaagag
gacatcccatggacgctgatagatttctatgacaaccagccagtcattgacctgattgag
gcaaagatggggatcctggacctgcttgatgaagaatgtttgtttcctcagggcactgac
caaagctggctgcaaaagctgttcaactacctcgatgccaatcctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtggaatatcaatgc
aaaggttttcttgaaaagaacagagacactctctatgaagagctggttgatatcatgaga
gccagtaagtttccctttctggccaactttttccgagaggaggagcaaagcactgtgagc
agtaaaggtgtcaaagtgaggccggccaggcccggagtgaaaccagccaataaacagctg
aggacctcagtgggagataagttctgcagctccctgtctttactgatggaaacactgaat
gccaccacccctcattatgtgcgctgcattaagcccaatgatgaaaagctcccatttgaa
tatgactccaggagggtggtgcagcagctgcgagcctgtggagtccttgaaactattcgc
atcagtgcacagagttatccatccaggtggacctacattgagttttacagccgatacagt
atcctaatgtcacatcaggaggctgacgtcagggacaagaaacagacctgcaagaaagtg
ctgcagaggttgattcaggaccccaaccagtacaagtttggccggacaaagatcttcttc
cgagccggtcaggtagcttatctagagaagctgcgtctggaccgactgagaggagcctcc
gtgaccatccagaaacactttcgtgggtggagccagaggaggaagtacctgcgcatgaga
caggcggccatcatcctccaacagtacatccgtggagagaagacaatccgtaaaacagtg
actgctgcaacactgaagcagggctgggcatcagtggtgatccagaaatactggaggggt
taccgcatgagacagatcttccaggtagtccgtctggcctccatcaccattcaggctttc
acacgaggttggatggcccgaaaacggtacaaaaagatgatggaggagcagaaagctctg
attctacagaagtacgccagagcatggctggtacggcggcgttttcaaaccatgcgtcgg
cttgtgctcaacgttcagctctcctacagggtgcagacgctcaagaagaagattgaagag
cagaacaaagagaaccgtggattgatggaaagactgacaagcttggccaactctcacgct
cagacggtggacaggcttcaagttcttgaagtacagctggaaaaatcaaccaaccagaag
gcgtctttggaggcgagggagaagaaagcgaaagaagatgccagtgtgacaactgcacag
cttaaaaaggaaatagatgctctaaaccttgaaaagcagaacctggagaagaagtttgaa
gcttccaccaaagaagcccaagaaagctttgatgagataaagaggggccttcaggaagag
aaagaatatgaagcaaggctgagaaaaattgcagagaacaacactgagatccagcgacat
gaccatgagagagaggtggaagccctgaaagaggagattaagagactgaaagaggagaga
gtcagtctgcagagaaagatcgaggaggcggacagggcgaactctgacctgcaggagcag
aatatccagctcaccaaacatatcaaggtcattcctgagctgcgcagggatctcaacaac
ctgcaaaaccagaggaataacatggacaggaggatgaagcaacagtcggaacaagcacga
gctaaaatgaacgatattacgagacaacttctgggtggtgttgtcgaacaggaggttctt
ttggggctaaccccagacgactctgagaagatttatgaagttgaagacttgctaacagcc
tttgatggactgcagaaagcaaccagaatactggaaagccaccagagggagcagaaggag
agctatgagacccaagtggagggcttgaagttgaaaatggaccacctccaaaatgagaac
agcaagttgcaaaacctgttccaggagaaaagtaatgtcaacgagagcattcgccaagaa
gtgtccaggctcagcagcgagaactcagtgataccagagctgaaactacaggcttcagag
ctgcagaggcaaaagcaagaattggaggtccgcatagaggagcagagcagagaactagca
gaaaaagttgaggagatcacgaacactctccagaggaagattaaagaggagagctcacaa
cgcaggcactttgaggagaaagctgaagagctggaggagctgaagagggagcttcatggc
aaagtagaggagctggaagaggagaatgatcacttgaagagacagctgctgatggagatg
gaggccaagagcaaactgagacaggagacatcacagttaactgctgagaacatggacttt
gaggagcagcttgaccagaaagacagattaataaggaaactccagaatcaaataaagagc
cttgaaacatcacagaaagcagtgaagcaaacgtctgcgcccgcaattcccaaagattac
ctcggcatgttggagtacaagagagaggacgaatccaggctcattcagaacatcattctg
gagctgaagcccaaaggtgtggtggtcagtatgatgcccggcctgccggctaacatcctc
tttatgtgcatccgccacgctgactacctgaacgatgaagtcaaactcaagtctctcatg
actgccatcatcaacggtgtcaaaaaggtcatcatgagttaccacaaagactttgagttg
ctgtcgttctggctctcaaacacatatcagctgctcaactgtctgaagcagtacagcggg
gaggaggagttcatgaaacaaaacactcctcgccagaagaagaactgcttgaagaatttt
gatttgtctgaacatagacagattctcagcgacatggccattcagatctaccaccagttt
atctcagtcatggagaagagcctcgctcctgcaattgtgcccggcatgttggagcacgag
agtttacagggaatctccagcatgaagccgacgggcttcaggaagcgttccaacagcatc
tatgaggactcggagacacacaccatctcctccatcattcagcagctcagtgtcttccac
tccaccatgagccagcatggcatggagcagggcctcatcaaacaggctgtcaagcaaatg
ttcttcctcattggtgcgactgccctcaacaacatcatgctccgcaaagacatgtgctcc
tgcaggaagggaatgcaaatcaggtgtaacatcagttatctggaggaatggctgaaggag
aagcaaatgcaaagctctaacgccatggatactcttaggccgctgtcacaggccgcctgg
ctgctgcaggtcaacaagtccactgatgatgacgccaacgaaatcactgaaaaatgcact
gagctcaaccctgttcagattgtcaagatcttgaactcgtacacacccattgatgatttt
gagaaaagggtgtcgtcgtcatttgtccgcaaagttcagtcgttactacatgaccgtgac
ggatccacacagctgatgctcgactcggactatcgtttccaggtcacgtttcctttctgc
ccgtcctcacaggctctggagctgctgcaggtccccagcagccttcatcttggctttcta
accaggatctga
DBGET
integrated database retrieval system
