Epinephelus fuscoguttatus (brown-marbled grouper): 125886885
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Entry
125886885 CDS
T08419
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
efo04054
]
125886885 (nlrc5)
Pattern recognition receptors [BR:
efo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125886885 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_NXF1-5
Atypical_Card
NOD2_WH
AAA_30
AAA_22
ABC_tran
AAA_25
LRR_8
Motif
Other DBs
NCBI-GeneID:
125886885
NCBI-ProteinID:
XP_049429201
LinkDB
All DBs
Position
LG4:13058874..13116937
Genome browser
AA seq
1909 aa
AA seq
DB search
MDKEVDPDDENVNLVLAQESSELLHIISSQSPAIIMELCQMMPSDARWNINQAPTTEQIK
AMLEYFRVASATDCCSFLQSMCMLCENIPMHLESRLMSIAGYANNISENSSPSLTEGKST
SPPSEQQPIKRPRIDHWEQYIAAVVSLLQRRWEILSEHLVREVQLENVWVSLRTSNRGRD
RPDQTPGPADKGGRTPEPDGDFGSTDSRVTLETFLQGCAGKVTVLVGQAGSGKTLLMSCL
GQQWAHGLGPVPSSYLFILLEFRQLNILSHPLSVSELLFRHYLPPKGGDDEKRAIVHYLL
SNPEQTCWVLDGYDEFHSKLTRQELQRELLDPEKPLPVADLISALLNRQLLPGCTVVVTC
RARDVIDLEGISDKVGQLLGWDRHAIKEYVDNFFRVKGHSANKAVGVQAADLLLSSRHLL
AMSYLPALCNICCICLEHLLLERGNPRKMQIPEEALSETRRKAGVKDEKGVQIPGGGREE
GSRGGSYVQRGDQGGRRGSEDIMMDGTNGRAQLPPVQVQIPSTLTQVYLTVLGAFLSHDP
DKRGRDDEPKTTRVLQSLSQYQSELCELSQLAWKGLEDSKILFMEEDITQDVLKFSIRTG
LFSQVELRREDGMLVNCYCFIHLTLQEFLAAIRIMTSTDVSDMQLKKRFSLRTRWTTRSD
QRTVFTDSLHQYVCGLASPHCTAALVQLAKTSGGTGSQSWVQQRQALVRKLLKNLCHSNT
LTGPKILELCHCVQESQDNQLAKEFVGTRPTLELRNIWLSPNDIDALAFVVNSVGDIGIG
LDFGACSMELECLDVLPRCQYIQYLSFRSRKYGDKFAEKLSSILPKFTTLKKLEFCGASL
TATGAACLASALQNCPDITEINLSDNNLKDRGIEHIADFFPKQPRLVSVRLGRNNSSLEA
VDYLIGKMSSCLNIQHLHADGKKELTVTFSQNSDLISHKTKSEPTISLLNQKWSKPEMQK
IAESLARCPAVASLDVSGDHMDVECLRMLTQFLPKFNVTDKIIVNESCSSVEGLVVLTAL
LSDCPAVVELHIRLQSPVQASIVFSKGRDKPANEKSKMLCLSCCALLPTHLERVLRSLGT
SSDLTLLDLSSNCLGNRGLRKLLDVVPCLSSIQEVNASNNGIGMEGVVMLAGALCSHNNL
TQIHISDGGRERVILKFCPDKRHDKQQLKMFRINNSCLMPSDITTLCKRLVQCRSHLELD
LSHSSLTDKAIENLLKVLPKMASLQRINVSHSVASTTEALMLVKCLTVSQRVTSVELRPE
TEAFIQFDSVKSEQASCRLTHCSLNSDNLEKLLEILQQGPQLSDLDLSSNKLGDEGVKRF
LDSLQELKITSYANLSNNGLTQQGLLEVASTLCTSNNICSVEVSLEEEERCLIWFTQYEG
CVKTLSVRESSLERDHLIRLAEIVSTCPSLTKLDFKNNSLQSDWIEDFVKLFNSSQKGFS
VSIDERWIRAEEAVRLVCRCLDVSRNIQTIRVHHTTLHLSLMRSTELTSVSLVDCAVEGY
QLESMKSIILRCPLLTELDFSHNSLGIEGAEFLCSVLPSLPHLTALSIGSKEACVTVVEK
LSEALLQGTAIECLNLSGHVISDTVALIMTRMLPRLRSLNLSHCVWSVAGGLQLIQNLGE
CDVLEGLCLDSLKLNEESTMYLAQALRNINSIRSLKLNKIATVMGPLGANGLLDLLAATE
GLRQMEEIELEGWRMADRGIEQLTRLLPIWKELKKISLSKNLISDQSGDKLLEALNSCSH
LEELHLCSNSLGDLTAARMALVLPSLTHITVLDLSDNSVGHEGSVNLSKAMMHMKNLTKI
HLTSVGTSELCAVAASLACCPLIQDVGLGWNNCGDKVAVELAKVMPVCQKLTRIDLESNA
VSVSGAEALCRALQLCPAVQLIRLWRNSVPSSEAQRLSLRDRRLNFSPT
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggataaggaagttgaccctgacgatgaaaatgtgaacctcgtcttggctcaggaatcc
tcagaactgctccacatcattagcagtcagtcaccagcgatcataatggagctatgtcaa
atgatgccgagtgatgctagatggaatatcaaccaggctcccacaacagaacaaatcaaa
gctatgttggagtacttcagggtggccagcgctacagattgctgcagctttctccagagc
atgtgtatgttatgcgagaacatccccatgcacctggagtcgaggctcatgtcaatagct
ggatatgcaaataatatttctgaaaattccagccccagtttaacggaagggaagtcgaca
tcgccgccttcagagcagcagcccatcaaacgcccacggattgatcactgggagcagtac
attgctgcagtggtgagtttactgcaaaggaggtgggaaatactcagtgagcacctggtg
agggaggtccagctggagaatgtgtgggtcagcctaaggacatcgaacagaggcagggac
aggcctgatcaaacccctggcccagcagacaaagggggcagaacacctgagcctgatgga
gattttgggtctacggattccagagtgacattggaaaccttcctccaaggatgtgcaggg
aaggtgacagttctcgttggccaggctggatctggaaaaactctgctaatgtcttgctta
ggacagcagtgggcacatggactaggtcctgtcccttcatcctacctgtttatcctgcta
gagtttcgtcagctcaacatattgtcccatcctctctcagtgtctgagctgctatttcga
cactacctccctccaaaaggaggcgatgatgaaaagagagccattgtgcactacctcctt
tccaatccagagcaaacctgttgggtgctggatggctatgatgagtttcacagcaaactc
accagacaagagctgcagagagagctattggacccagaaaagcctctgcctgttgcagat
ctcatctcagcactgttaaatcgtcagcttctaccaggatgtactgtggtggtcacctgt
cgagcacgcgatgtcattgatttggagggcatatcagataaagtagggcagctgctgggg
tgggaccgccacgcgatcaaggagtatgtggacaacttctttcgagtcaaaggtcactca
gcaaacaaagctgttggagtgcaggcagcagatctgcttctctctagtcgacacttactc
gccatgtcatacctccctgccctctgcaacatctgctgtatctgtctggagcatttactg
ctggaaaggggaaacccaagaaagatgcagataccagaagaagcactaagtgagacaagg
agaaaagcgggagtaaaagacgaaaaaggagtacagattccaggaggaggaagagaagag
ggcagtagaggagggagttacgtacaaaggggagaccaaggaggaagaagggggagtgaa
gacataatgatggatgggacaaatggtagagcccagttgcctcctgtacaagtccagata
ccctccaccctcacccaggtctacctcactgttcttggagcctttctgagccatgaccct
gataaaagaggaagggatgacgagccaaagaccacaagagttctacagagtctgagtcag
tatcaatcggagttgtgtgagctgagtcagctggcctggaaaggcttggaggacagcaag
atcctcttcatggaagaagatatcactcaggatgttttgaagttttcaatcaggacaggg
ctcttctcacaggtggagctcagacgtgaggatgggatgcttgtcaactgctactgcttc
attcatctgacactacaggagtttttggctgcaatcagaatcatgaccagcactgatgtt
agtgacatgcagctcaagaagagattcagtctgagaactcgctggacgaccaggtcagac
cagaggacagtcttcactgactccctgcaccagtatgtctgtggtctggcttccccacac
tgcactgcagccttagttcaattagccaagacctctggtggaacaggaagccaaagttgg
gtgcaacaacgacaagctcttgttcgaaaactgcttaaaaacctctgtcacagcaacacc
ctgactggaccaaagatattggagctttgccactgtgtccaggagagccaggacaaccaa
ctagctaaggagtttgtggggacgagacccaccctggagctgcgcaacatctggctgtca
cctaatgatattgatgctctggcttttgtagttaactcagtaggtgatattggcattgga
ttggactttggagcatgttcaatggagctggagtgtttagatgtgctgccaaggtgtcag
tacattcaatacctcagttttcgcagccgcaagtatggtgacaaatttgccgagaagctg
tcttccattctgccaaaattcacaaccctgaaaaaactagagttttgtggtgccagtctg
accgccacaggagcggcttgtttggcctctgctctacagaactgtccagacataactgaa
atcaatctgagtgacaacaatctgaaagatagaggaatcgaacacatagcagattttttt
cccaaacaaccaagactggtctcagtaaggctgggtcgaaacaacagctcactggaagca
gtggactatcttattgggaaaatgtcttcctgtttgaacatccagcaccttcatgcagat
gggaagaaggaattgacagtaactttctcccaaaactctgatctgattagccataaaact
aagtctgaaccaacaatcagcttgttgaaccagaaatggagtaagcctgagatgcaaaaa
attgcagagtcattggcgcgttgtcctgccgtggctagcctggatgtgtctggagaccat
atggatgttgaatgtctgaggatgctgactcagtttttgccaaagttcaacgtcaccgac
aagatcattgtgaatgagagctgctcttcagtggagggtttggtggttctgactgctctg
ctgtctgattgtcctgctgtggtggaacttcacatcagactacagagtcctgtccaggcg
tccatagtgttctctaaaggaagagacaaacctgcaaatgaaaaatctaaaatgctctgt
ctcagctgctgtgctctgctgccgacacatctggagagagtgttgaggagtctgggaacc
tcatctgatctcactttgttggatctgtccagtaactgtttgggcaacagaggtctgagg
aaactgttggacgtcgttccttgtcttagtagcatccaggaagtaaatgccagtaacaat
gggattggcatggagggagtggtgatgctggctggtgctttgtgctcccataacaactta
acacaaattcacatcagtgatggaggcagagagcgggtgatcttgaagttctgccctgac
aaaaggcatgacaaacagcagctaaagatgttcaggataaacaacagctgcctcatgcca
tccgatataaccacactctgtaaaagactggtccagtgtcgctcccatttggagttagat
ttgtctcacagctcactgacagacaaggctattgagaatctgctgaaagtccttccaaag
atggcgtctctgcagagaatcaatgtcagccacagcgtcgcatccacaactgaagcactg
atgttggtcaaatgtttgactgtcagtcagcgagtcacatctgtggagctcaggcctgag
actgaagctttcatccagtttgacagtgtgaaatcagagcaagccagctgcaggttaact
cattgtagcctcaacagtgacaacctggagaaactgctcgagatcctacagcagggtcct
cagctgtctgacctggatttgtcaagtaacaaactgggagatgaaggagtcaagcgtttc
ttggattctctacaagagcttaaaatcactagctacgcaaatttgagcaacaatggcctg
acccagcaggggctgttggaagtggccagcacactgtgcacctctaacaacatctgcagt
gtggaagtcagtttggaggaagaggagaggtgtctcatctggtttacacaatatgaaggt
tgtgtaaaaacgctgagtgtcagagagagcagtttggaacgtgatcatctgatcagatta
gcagagatcgtgtctacctgccccagtctgaccaaactggatttcaagaacaattccctg
cagtcagactggattgaagactttgtgaaactgtttaacagcagtcagaaaggattcagt
gtcagtattgatgaacgttggatcagagctgaggaagctgtcaggttggtgtgtcgttgt
ctggacgtcagcaggaacatacaaactatcagggttcaccacaccacactacacctgtct
ttgatgaggtccactgaactgacctcagtcagcctcgtggactgtgcagtagaggggtac
cagcttgaatctatgaagagcatcatcctgcggtgtcctttactgacagagctggatttt
tcccacaacagcctgggtatagagggagctgagtttctctgttctgtcctgccctcactg
ccacatctcactgctctcagtattgggtccaaagaggcttgtgtgactgtggttgaaaag
ctttccgaggccttgctgcagggtacagccattgagtgcctaaatctatcaggtcatgtg
attagtgacacagtagctctgattatgaccagaatgttgccccgtctgagatcactcaat
ctgtctcattgtgtgtggtcagtggcgggagggctgcagctcattcaaaatctgggagag
tgtgacgttctggagggcctttgtctggactccttgaaactgaatgaggagagcacgatg
tacctggcacaggcactaaggaatatcaactctatccgcagtctcaagctgaataagatt
gccacagtgatgggaccattaggagcaaatggtttgctagatctcctggctgctacggag
ggactcagacaaatggaggagatagagttggagggctggaggatggctgatagaggaata
gagcagctgaccagactgcttcctatctggaaggagctcaagaagatcagtctatcaaag
aaccttatcagcgaccaatcaggagacaagctactggaagctttgaacagctgcagtcac
ctagaagagctccatctgtgtagtaacagccttggtgatctcactgctgccaggatggcc
cttgttctgccatctctgacacacatcactgtcttggatctttcagacaacagtgttgga
catgaggggtcagtgaatctgtccaaagcaatgatgcacatgaagaacctcaccaagatt
catctgacctctgttgggacttcagagctgtgtgctgtagctgccagcctggcctgctgt
cccctcatacaggatgtgggtctgggatggaataattgtggagataaagtggctgtggag
ctggccaaagttatgcctgtctgtcagaagctgaccagaatagatctggagtcaaacgct
gtgagtgtttctggagcggaggccctgtgtagagccttacagttgtgtcctgccgtacag
ctcatcagactgtggaggaacagtgtcccgtccagtgaagcccagaggctcagtctgagg
gacaggaggctaaatttctcacccacctaa
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