Epinephelus fuscoguttatus (brown-marbled grouper): 125886936
Help
Entry
125886936 CDS
T08419
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
efo00535
]
125886936 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125886936 (acanb)
04091 Lectins [BR:
efo04091
]
125886936 (acanb)
Proteoglycans [BR:
efo00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
125886936 (acanb)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125886936 (acanb)
Lectins [BR:
efo04091
]
C-Type lectins
Lecticans
125886936 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
Ig_CD22
CLIC-like_N
Motif
Other DBs
NCBI-GeneID:
125886936
NCBI-ProteinID:
XP_049429280
LinkDB
All DBs
Position
LG4:complement(33747708..33768614)
Genome browser
AA seq
1314 aa
AA seq
DB search
MTPLLLLCVSLPFISATVLFELENHDDLDGTLRVSIPMEVPLRPLLGGKVVVPCYFQDNT
VNDPGAPTVAPLTHRIKWTYVTKDKVTTILVASEGKVNVETEYLDRVTMINYPLVPTDAT
IEITELRSKDSGTYRCEVMHGIEDNYDSVDIQVQGIVFHYRAISTRYTLTFEKAKAACIQ
NSATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRDRCFGDKEDFPGVRTYGVRD
VNETYDVYCFAEKLSGRVFYSMSVEKFTFYEAGDQCTKLGARLATTGELYLAWKAGMDVC
NAGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAVCFQAGEDAGA
VPVRTTPFPDIIRITPAPGMYPSLTPSPGGEEIKRGGVDTFSPLPIPPSMTDVDAAMGPT
GVVFHYRPITGRYTLTFVEAQEACQSVGAVIASPQQLQAAFERGLHQCDAGWLRDQTVRY
PIVSPRDNCAGNLPHIPGVRSYGLRPANEHYDVFCYVDRLQGEVFFTSDYDSFSFEEAVQ
HCQKLNTTLANPGQLFAAWNQGLDKCRPGWLMDRSVRYPITTPRSHCGGGQVGVHIIYAY
PNQTGFPDEHSRYDAYCFKAETPVVHVENETGLDLTVVTVDIINKTTITVDHFAPTVETT
VHYTETETSVNITEIEEFINKTTTTTQLVAPTVRPILTPVHVDESGSGAIDHSAGWEISA
ESGTSGISGEGSGSGQDIIFSGRTDVFSGEPSASGGPQEAEGGGAVIITSGEHESASGSG
EGLDREHSGFGVQGSGFPSGSGDIGISGGDSRIIMVDEKMEEVSKTHQRPTEQELGRGGI
DTSGAFLESGSGRMSGSGSGEFSGISFVDHSAVDLTVQPSGEQEVSGYHPFGSGFHGGSP
SGFPSGVSGSSSASGDYILHRGDVIYLTDNGMMEVTVPPLERHPEQGRGVVEVSGEGSAS
GIHHEFSGTYDQGLHFSGSGAPHKKLTTEKLSIALPPGMTYTEYIASLDQSGHWEEGQES
RAGPTEYVVTPDAAYTSPTTAPSMSLATPAVVEQPEVVEDPCEPNPCGSGTCSVQGELAV
CQCPHGFTGEDCSTPVQGCAEGWLEFMGSCYLHFAERDTWSEAEQRCQELNAHLVSIGSV
EEQQFVNSNGQDYQWIGLNDKDVQNEFRWTDGSPLTFENWRPNQPDNYFNSEEDCVVMIW
HEGGQWNDVPCNYHLPFTCKTGPVMCGAPPEVEHGRPMGSGRERYPVNSIVRYQCDAGYT
QRHLPVIRCKPDGQWEEPQVECTEAGANSNRLHKRSLRRRSKAVSSQQEQRKLL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgacccccctgcttctgctgtgtgtgtccttgcccttcatctcggcaacagtgttgttt
gagctcgagaaccatgacgacctggatggcacgttgcgtgtcagcatccctatggaggtg
cctctccgtcctctgctgggaggcaaagtagtggtaccctgttacttccaggacaacaca
gtcaatgaccccggagctcccaccgttgccccgcttacccatcgcatcaaatggacctat
gtcaccaaggacaaagtcaccacaatccttgtggcatctgagggtaaagttaatgtggag
acagagtatctggacagggtgacaatgatcaactacccattggtgcccactgatgccacc
attgagataactgagctgaggtccaaagattctggaacctaccgctgcgaggtgatgcac
ggcatcgaggacaactatgactctgtggacatccaggttcagggtattgtgttccactac
cgagccatctccacccgctacaccttgacatttgagaaagcaaaggcagcctgtatccag
aacagtgccaccattgccactccagcccagctgcaggctgcttacgatgatggataccac
caatgtgatgctggatggctctctgatcagactgtcaggtaccccatccatgagccaagg
gatcgttgctttggagacaaagaggacttccccggtgtgagaacctatggcgtgagagat
gtcaacgagacctatgacgtgtactgttttgctgagaagctgtcaggcagggtcttctat
tccatgtctgtagagaagtttaccttctatgaagctggagatcagtgtaccaaacttggc
gcccggcttgccaccactggagagctttacctggcctggaaggctggaatggatgtgtgt
aatgctggctggctggcggacagaagtgtacgctaccccatcaacattgctagacctcag
tgtggaggaggactcctgggagtgagaaccgtctacctgttccccaaccagacaggatac
ccctacccagactctcgctacgatgccgtctgcttccaagctggtgaggatgctggtgct
gtgcctgtgaggaccacccctttcccagacatcatccgcattacacccgcccctgggatg
tacccaagcctaactccctcacctgggggagaggagatcaagcgtggaggagtcgacacc
ttctccccactgcccatcccacccagtatgacagacgtagatgctgccatgggacccaca
ggcgtagtgttccactaccgacctatcaccggtcgctatactcttacatttgtggaggct
caggaggcctgccagagcgttggggcggtcattgccagcccccagcagctgcaggcagcc
tttgagagaggcctgcaccaatgtgatgctggatggctccgagaccagactgtcaggtat
cccatcgtgtcacccagagataactgtgctggtaacctgccacacatcccaggggtcaga
tcctacggcctaagaccagctaacgaacattacgatgtgttttgttatgtggaccgtctg
caaggtgaggtcttcttcaccagtgactatgacagcttctcctttgaggaggcagtgcag
cactgtcagaaactcaacaccaccctggccaaccccgggcagctgtttgctgcctggaac
caagggcttgacaagtgccgtcctggctggttaatggaccgtagtgtccgctaccccatc
acaacccccaggtcccactgtggaggcggtcaggttggagtccacatcatctacgcttac
cccaaccagacaggattccctgatgagcactcgcgctacgatgcctattgctttaaagct
gaaactcctgtcgttcatgttgaaaatgaaactggtctggatctgacagtggtgactgtg
gatattatcaacaagacaacaatcacggttgatcacttcgctcccacagttgaaactact
gtacactacactgaaacagaaaccagtgtaaatattacagaaattgaggagtttatcaac
aagacaaccaccactactcagctagttgcccctactgtgagacccattctgactccggtc
catgttgatgagtccggctctggtgcaattgatcattcagccggctgggagatctcagcg
gagtctggcacctccggtatcagtggggagggctctggttcaggacaagacattatcttc
agtggacgaaccgacgtcttctctggggagccatctgcctctggaggtccacaggaggca
gaagggggaggtgctgtcatcatcacatctggagaacatgagagtgcatctggatctggg
gaggggttagatagagaacactctggcttcggtgtacagggatcaggttttcccagtgga
agtggggacatcggcattagtggcggagactcaaggatcatcatggtggatgagaagatg
gaggaggtgtcgaaaactcaccaaagacccactgagcaggagttaggtcggggagggatt
gataccagtggggctttcttggaatctggatctggaagaatgtccgggtcaggctccggt
gaattttctggcatatcatttgtggaccacagtgccgttgacctgacagtccagccgtcc
ggtgagcaggaggtgtctggatatcatccctttggctctgggttccacggcggctctcca
agtggttttccatctggtgtttcaggcagcagctctgcttctggggactatatcctgcat
cgcggggatgtcatctaccttacagacaacggcatgatggaagtgaccgtaccgccactg
gaacgccaccctgagcagggccgaggggtggtggaggtcagcggggaaggaagtgcatca
gggatccatcatgaattcagtggcacttatgaccaaggcttgcatttctcaggaagtgga
gcccctcataaaaaactgaccactgagaagctttctatcgccctgccccctggaatgact
tacactgagtacattgccagtcttgaccaatcgggacactgggaggagggtcaggaaagc
cgtgcaggacctacagagtacgtagtgactccagatgcagcctacaccagcccaaccaca
gcaccatcaatgtcattagcaactcctgctgtagtggagcagccagaagtagtggaagac
ccctgtgagccaaacccctgcggttcaggaacctgctctgtgcagggagagctcgctgtg
tgccagtgtcctcatggtttcactggcgaagactgctcaacacctgtgcagggctgtgca
gagggctggctggagttcatgggcagctgttacctccactttgcggagagagatacctgg
tctgaggctgagcaacgctgtcaggagctcaacgcccacctggtcagcatcggctcggtg
gaggagcagcagtttgtcaactccaatggtcaggactaccagtggattggactcaatgac
aaagatgtgcagaatgagttccgctggacagacggcagtcctctgacatttgagaactgg
aggcccaaccagccagataactacttcaactctgaggaggactgtgtggtgatgatctgg
catgagggcggacagtggaacgatgtgccctgcaactaccaccttcccttcacctgcaag
actggacctgtcatgtgcggcgctccccctgaggtggaacatgggcggccgatgggcagt
ggcagagagcgttaccccgtcaactccatagtccgctaccagtgtgatgcaggctacaca
cagcgccatctgcctgtgatacgctgcaagccagatgggcagtgggaggagccacaggtg
gaatgtacagaagccggcgccaacagtaacaggctacacaaaagatccctcaggagaaga
agtaaagcggtgagcagccaacaggaacagaggaagctgctctga
DBGET
integrated database retrieval system
