Epinephelus fuscoguttatus (brown-marbled grouper): 125887052
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Entry
125887052 CDS
T08419
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125887052 (lingo1a)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125887052 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
125887052
NCBI-ProteinID:
XP_049429517
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Position
LG4:35481267..35677222
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AA seq
615 aa
AA seq
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MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFATFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRLLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
APFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
atcctgatgctgggcaccgtgctgtctggctccactacaggctgtccatcccgctgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacagttcccgag
ggcattcctgcagaaacgagattgctggacctcagcaagaaccgcatcagaaccatcaac
ccagacgagtttgccacctttcccaacctggaacacctggagctcagcgaaaacacgatc
tccactatagaacccggagcgttcaacaacctttacggcttgcggacattggggttgcgt
agcaacaagctcaagttgatccagctcggcgttttcacaggcctgagcaatctcacgcag
ctggacataagtgagaataagattgtcatcctgttggactacatgttccaggatttgtac
aacctgcggtctttagaggtgggtgataacgacctggtttttatctcccaccgggctttt
catggcctgagtagccttgagcacctgagtctggagaagtgcaacttgtcctctgtgcca
acagaggctttcacccaccttcacagtctgatcacgctcaggctgcgcctcctcaatatc
aatgtcatacgggattactccttcaaacggctgtatcggctcaaagtgttggaaatagcc
aattggccatatctggatacgatgaccccaaattgcttgtatggattaaatctcacctcc
ctgaccatcgcaaatgccaacctgaccacaattccctatgtagccctgcggcacttggtt
tatttgcgctttcttaatctttcatataacccgatccacaccatcgaggggaataagctc
catgatcttctgcgtctgcaggaatttcacctggtaggaggcagactggcaatgattgag
ccctactctttccgtggtctgaactacctgaagattctaaacgtgtctggaaactctctt
agcactttagaggagtcggctttccattcagttggcaacctggaaacccttgccttgtat
gataatcccctggcctgtgactgccgactgttatgggttttccgtcgacgctggagactg
aacttcaacaggcagcagcccacctgtgcctcccctgagtttgtccaaggcaaagaattc
aaagacttcccggatgttctgcagcccaactacttcacatgtcgcaagtcgaggattagg
gatcgcaagccccagcagaaatttgttgatgagggagccattgttcattttgcttgccaa
gcagatggagatcctgctccagtgataatgtggctctccccgcagaaaaagtttatcacc
accaagacaattggaaggctctctgtgttgccagacggcaccctcgaggttcgctatgcc
cagattcaagacaatggtacatatgtgtgtatagcaagcaacgcgggtggaaatgacacc
tctcttgctcacctgcacattcatagctactcgcctgactggccacaccagcccaacaag
acttttgccttcatctccaaccagcccacagaaactggtgctaacggtacaagagccaac
gcccctttcccctttgatataaagacgttgatcatcgccaccacaatgggcttcatctct
tttctcggtgtcgtcttgttttgcttggtactgctcttcctttggagcagaggtaaaggc
aacaccaagcacaacatcgagatcgagtacgtgccacggaaatcggacgctggcatgagc
agcagcacggtggatgctccccgcaagtttaacatgaaaatgatttaa
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