Epinephelus fuscoguttatus (brown-marbled grouper): 125887124
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Entry
125887124 CDS
T08419
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125887124 (irx5b)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125887124 (irx5b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
125887124
NCBI-ProteinID:
XP_049429634
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Position
LG4:complement(38786926..38792496)
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AA seq
422 aa
AA seq
DB search
MAYPQGFLFQPSVSLSLHSCPSFSSGVILGPRTEELGRSSSGSAFAPYSGSATSPGFNSH
LPYGGEPRAAATLSSFVSPSYDPSSGISGSLDYHPFGPLGPYPYGDPSYRKNATRDATAT
LKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSED
EEEEDNIDLERNDDDDEPMKANSDEPETKSDTASRLPASVGTSCVLVYREDSGSSSDTDR
SFTDPDFKDSGDRRLPLIPRPTSTGAPPHNTPPGTVRVSEPQRSSSPPSKEHVDSCNPIQ
GPNPAPKPKLWSLAEIATSSDKSKGCSDSSQSVGAPTHPTSTSRTPFSHSTALPRHLYYT
SPFIPGYSSYGPLGPLHGGPASHLNGLQQTMLQRAEAIARDCKLRSQSQLDLHELKKGMT
NM
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcctcagggtttcctcttccagccgtccgtgtccctgtctctgcactcctgc
ccgtccttcagctccggggtcatcttaggaccgaggacggaggagctcggccgctcctct
tcgggctcagccttcgctccgtactcgggatcagcgacctctcccggcttcaactcccac
ctaccgtacggcggggagccccgggccgccgccaccctcagctcgtttgtgagtcccagc
tatgatccgtcctcagggatctctggctccttagactaccacccgtttgggcccctgggg
ccgtacccatacggagacccctcctacaggaagaacgccacgcgagacgccacggccacg
ctgaaggcctggctcaatgagcaccggaaaaacccgtaccccaccaagggggagaagatc
atgctggccatcatcaccaagatgaccctgactcaggtgtccacctggttcgccaacgcc
cgccggaggctgaagaaggagaacaagatgacctggaccccgaggaacaggagcgaggat
gaggaggaggaggacaacatcgacctggagaggaatgacgacgacgacgagccgatgaaa
gccaacagcgacgagccagagacgaagagcgacactgcttctcgtcttcctgcctctgtg
gggacctcgtgcgtgttggtgtacagagaggacagcggcagcagcagcgacaccgaccgg
agcttcactgatcccgactttaaagactcaggggacaggaggctgcccctcattccgcgc
cccacttccacaggggcccctccccacaacacaccaccgggaacagtcagagtgtcggag
ccacagcgatcatcgagcccaccgtcaaaggagcacgttgactcctgcaaccccatccag
gggccaaacccagcccctaaacccaaactgtggtcgctggctgagatcgccacgtcttca
gataaaagtaaaggatgtagtgactcttcacaaagcgtaggggctcccacccaccccaca
tccacatcccggaccccattctcacacagcactgccctgccccgacacctctactacacc
tcccccttcattcccggatactccagctacggccctctggggcccctgcatggtggccct
gcctcacatttaaatggattacagcagacgatgctgcagagagcagaggccatagccaga
gactgcaaactacgcagtcagagccagctggacctgcacgaactcaagaagggcatgacg
aacatgtga
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