Epinephelus fuscoguttatus (brown-marbled grouper): 125887369
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Entry
125887369 CDS
T08419
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125887369 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125887369 (edc4)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125887369 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
125887369 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
RMC1_N
WDR55
PGDH_C
PIN_8
EIF3I
Motif
Other DBs
NCBI-GeneID:
125887369
NCBI-ProteinID:
XP_049430089
LinkDB
All DBs
Position
LG4:12185758..12221002
Genome browser
AA seq
1392 aa
AA seq
DB search
MASNSNIDIEGATQHLRDILKLDRPGNSTDAPSTDGPRMPSFNGELNGLLGAAGLLGGTD
RSTMSESSRPISTDLSSAQECQIICLSGDDRSTCIPITSNNVEIVASQDSSINSKARGSN
KVKIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIRGANNHAMIRVLSVSFAERSLLKGFTG
AVTDLAFAHLDSSLLGCVDEAGNLMVWQLTCTGNKILDQVVVHIQRPENTPLNSHRRLIW
CPFIQDDNEENQDDTSQTLALLHEDMAEVWDLEVLRANNSSWPVDYTDVKEGLITVKGHN
QRVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRCLHELRPHGGRPLSCLLFCDN
HKRQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDLFNSSVLPSLKASVDLS
AEYLILTDVQRKVLYVMELRQDLEKGKASFTAVSEFLLTHPVLSFGVRDVAHSRLRHTEV
LTAEEESESMTTEGTQGPTESKSGIQIKLYCVHTKSLQDVQIWFQPNLGSSSAAFLPHSD
SQDGFAGFSDHLTDQSSDKESGSGSQTDLRKIPSLPAPTDFLSNSGASSGTKLMTPDAFM
TPSTSVPASPGSSASSLTIVTAISSNSDSTNRAIDDVSQSPNRAENNSSSSLAVSTSTSS
PRAASAVLLPGLESLQALASPSGPLALDSPQVLDSPLLPPLASPTRARSPDVISSASTAM
SQDMPEIASQTLQLQRGMVSSLEPLPLSALQTDSMASAASALHLLTSPRTANSNSLLPLE
LGGADGPVGGAVESEPRLSHTPSLLENALSQENPGVGGGSSDGSVSHTPWPAAPDITRET
RNSLRDNGLGDCSREESNDRHLSSPYHRRSYHLTQNDSQEAGAEQSDPDDEVASLASSSG
NCGSRSSHRLPVKDWKTSPRGSPKVKRKTKKDDSESSQSRQMDSGQINAEVQDELLMLLR
SQQRELTELRGQIEAMQSTIMAQVEHVLTNHQEQEQRRLERVLAESQNHQQQLQEQLSQQ
LSHTLSTVLTNRMDKVLREEMKKTVPQTISKSLEPVTGQLNNTIAAKLTAVEVTLKDNVS
KVVKSKNTTDAIGRAAAEAMQGPIQAAYKDTFQSIVLPVFERGCQSMFQQINDSFKQGTQ
EYIQQLETHMKNRKQREQESRDPMIGQLQQMIDSFQSSTDQLANNITANVRADVQHQIQM
MVGNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQA
NILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLS
SNLSTRSELKISYLEDAVMNLDHGDPLTRDHMSSVLAQVRPKLFTFLQQDPHSPLSKRAR
RLMMMLQGLVSH
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaattctaacatagatattgagggtgcgacccagcatcttcgggacatcctc
aagctcgaccgtcccgggaacagcaccgatgcaccatcgactgatggcccaagaatgcca
tcttttaacggagagctgaatgggctattgggagcagcaggccttctgggaggcactgat
cggtccaccatgtcagaatctagcagacccatctccacagacctcagcagtgctcaggag
tgtcagataatctgcctttcgggtgatgatcgctccacctgtatccccatcacctccaac
aatgtggagattgtggcgagtcaagattccagcatcaacagcaaggctcgtggcagcaac
aaggtgaagattcaacctgttgccaagtacgactgggaacacaaatattattatggcaga
ctgatagccgtgtccaactccttcctggcctacgccatcagaggagccaataaccatgca
atgattcgtgtcctgagtgtgagtttcgccgagcgctccctcctgaagggcttcactgga
gctgtcacagatctggcttttgcccacctcgactcctccctattgggttgtgtagatgaa
gcgggcaacctgatggtctggcagctcacctgcactggaaacaagatacttgatcaggtg
gtggttcatatccaacggccagaaaacactccactgaactctcatcgtcgcctcatctgg
tgcccgttcatccaggatgacaatgaggagaaccaggacgacaccagccagaccttagcc
cttcttcacgaagacatggctgaggtgtgggacctggaagtcttgagggccaacaacagc
agttggcctgtcgattacacggatgtaaaagaaggcctcatcacagtcaagggacataac
cagcgagtcagtgaaggggccctgtctccagatggaacggtgttagccacagccagccat
gatggatacatcaagttctggcagatatacattgaggggggacaggataagccaagatgt
cttcatgaattgcggccccacggaggacgtcccctttcctgccttcttttctgtgacaac
cacaaaagacaggacccagaagttcctttctggcggttcctcataaccggagcggatcag
aaccaggagttgaaaatgtggtgcacagtttcctggacctgtttacagaccatcaggttt
tctccagatctgttcaactcatcagttctgccgagtctgaaggccagtgtggacctctct
gctgagtatcttatcctcaccgatgtacagaggaaggttctgtatgtgatggagttgcgg
caggatctggagaaaggcaaggccagtttcacagcggtgtcagagttcctgctgacccac
ccagtgctcagctttggggtccgggatgttgcccacagccgattgcgacacactgaggtc
ctcactgcagaggaggagagcgagagcatgacaacagagggcactcaaggacccacagag
tctaagtctgggatacaaataaaactctactgtgttcacaccaagagtctgcaggatgtc
cagatctggtttcagcccaacttgggttccagctctgcagccttcctgccccattctgat
tcccaagatggttttgcagggttttcagaccatcttactgaccagagctctgacaaggaa
tcaggaagtggctcccagactgacctaaggaagatcccatcgcttcctgctcccactgac
ttcctgtcaaactcaggcgccagcagtgggaccaagctgatgactcctgacgccttcatg
acaccaagtacttcggtaccggcctctcctggcagcagtgccagcagtctgactattgtg
acagctatcagcagcaactcggactcaactaacagagctatagacgatgtgagtcagagt
cctaacagagcagagaacaacagcagcagcagtttggcagtctccacctccaccagcagc
ccaagagctgcctctgctgtgctgctgcctggactggagagcctacaagctttagcgtcc
cctagtggtcctcttgcactcgacagccctcaggttctggattctcccctcctgccacct
ctggcttctccgaccagggcgcgctcccctgatgtcatttcctcagcctccacagccatg
tcccaggacatgccggagattgcatctcagactctgcagcttcagcgtggaatggtgtca
agcttggagcccttacctctttctgcccttcagacagacagcatggcctctgctgcatct
gcgctgcaccttctcacctcaccacgtacagccaacagcaacagcctgttgcccctcgaa
ctcggaggtgctgatggaccagtgggcggggccgtagagtcagagcccagactcagtcac
accccatctttacttgagaacgccttatcacaggagaaccctggggttggtggagggtcc
tcagatggtagtgttagccacacaccttggccagctgcacccgatatcacgagagaaacc
aggaacagtctaagagacaacggtcttggtgactgttcaagagaggagtcaaacgacaga
catttgagctcaccttaccatcgacgctcctatcacctcacacagaatgacagtcaggaa
gctggcgcagagcagagtgaccctgatgatgaggtggccagccttgcatcatcctcagga
aactgtggttctcgttcttctcacagactaccggttaaggactggaagacctcgccacga
ggctcgccaaaagtaaagaggaagaccaagaaagatgacagtgaatcatctcagtccagg
caaatggactctggtcagataaatgcagaagtacaggatgagttgttgatgctgctgcgc
agccagcagagggagttgactgaactgcgaggacagattgaagctatgcagagcactatt
atggcccaagtagagcacgtccttaccaaccaccaggaacaagagcaacgcagactagag
cgagttcttgcagagagtcagaatcatcagcagcagcttcaggaacaactcagccagcag
ctcagccacaccctcagcacggtgctaaccaacagaatggacaaagtgctacgagaggag
atgaagaaaacagtcccacaaacaatctcaaagagtctggagccagtgacaggtcagctg
aacaatacaattgctgctaaactgaccgccgtggaggtcaccctgaaggacaatgtcagc
aaggtggtcaaatcaaagaatacaacagatgcaattggtcgagcagcagctgaggcgatg
caggggcccatccaagcagcctataaagacaccttccaaagcatcgtgctgcctgttttt
gaaagaggctgccaatccatgttccaacaaatcaacgacagcttcaaacaaggcacacaa
gaatacatccaacagcttgagacccatatgaagaacagaaagcagagggagcaggagtca
cgagaccccatgattggccagctccagcagatgatcgacagcttccaaagctccactgat
cagctggccaataacatcacagctaacgtccgggcagacgtccagcaccagatccagatg
atggtgggaaatttgcaggagtctattcttagccacgtgcagcgaattgtcaaaggggag
gtgagcctggcaatgaaggagcagcaggcagtggtgacctccagcatcatgcaggcaatg
aggtcggcagccggcacgcccgtccccacagcacacctagactaccagacacagcaggcc
aacatcctgcagctcctccagcagggccagctcaaccaggctttccagcaggctctgtca
gcaacagatctgaacttggtcttgtatgtgtgtgagaccatcgactctcagcaggtgttt
ggtcagcacccctgccctctcagccagcctgtgctgctgtcgctcatccagcagctctcc
tccaacctctcaacccgctctgagctcaaaatcagctacctggaggatgcagtgatgaac
ctggaccacggggacccgctgacaagagaccacatgtcctccgtgctggcccaggttagg
ccgaagctctttaccttcttgcagcaggacccccacagcccgctcagcaagagggcgcgg
cgcctaatgatgatgctgcagggtctcgtcagccactag
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integrated database retrieval system
