Epinephelus fuscoguttatus (brown-marbled grouper): 125887373
Help
Entry
125887373 CDS
T08419
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04110
Cell cycle
efo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125887373 (smc1b)
04114 Oocyte meiosis
125887373 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125887373 (smc1b)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125887373 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
125887373 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
CATRA-C
AAA_13
Motif
Other DBs
NCBI-GeneID:
125887373
NCBI-ProteinID:
XP_049430092
LinkDB
All DBs
Position
LG4:complement(41146009..41169175)
Genome browser
AA seq
1242 aa
AA seq
DB search
MGYLKQIDIENFKSWRGKKVVGPFMRFNCIIGTNGSGKSNVMDALSFVMGERAASLRVKH
LRDLIHGAHIGRPVQDTARVAMLYCDDEDQETAFCRTIVGDSSEFHINGVRVTLAKYTEE
LKKIGIVTKARNCLVFQGAVESIALKDPKERTKMFETISQSNEYAAEYNKKKEALLKAKE
DTQFHFNKKKSATVERKQVSQERAEAQRYQGLVDDLYQTRLQLSLAELYHNEKAIDALSN
TLREKQQAAAAKNSKVVNAEQTVKTHKKEHGRLNREQQHVEKEISAQEHILSQSRSQYIK
AKVNTSHHMKKAEEVHDALRKSQRLMAVKEQELAEGRQEISDLERAWRNYERRVQERGAS
PGRDIELDEDQMERYTELKELARKQGAVLSQQAEKLQWEVRADYEKMAFDQRRKKEVEVA
IRNNQTQLDDLTRRAEKLEDYTKSCTLSLEDYCQREKSLSAELQQGRQRSEEVNQELGQV
LEELGNACLDSQESSRQTQRKELLERLRRLYPESVFGRLSDLCSPIHKKFQLAVTKVFGH
NMNAIVVTSEKVARDCINFIKTERAERETFLPIDYLDVSPLNERLREVPGAKMVVDVVQV
NTGTAAALLRKVVQFVCGNALVCETIKDARSLAFDGQVRLKTVALDGTMFTKSGMISGGS
SYLRTKARCWDEKDLTKLRERKDQLTAELRDLMKLKRKDSELKQIIAQAQGAQTRLKYSK
TELENLRKKIILKCQVEISRMESELANLESQIQMQKESVEAKDEQMKRIRGQINQMEDLV
FSDFCAEIGVDSIREYEQEHLKQQTELDKKRLEFESQCTRLKAQLEYGQDQLEQQKKKHR
KMEETIDKEERTMAEQRKDEEKLLAAVEEGQSKLLELKNQLLSKKSQVSAAKAELDQKTK
ILQEINKELVKLQREVMSAETALEQKRLVKHNLLLACKIQSLPVILLSGSLDEISEVELD
TESESTSATMNIYEREALLVIDYSGLDAEVRSLQADEEIEACLERLKESASSIEAVLHRT
TAPNLKALAKMREVKDKLHEVTDAFDASTRAARKCSQEFEQVKARRLQLFSQCFEHVSIV
IDQIYKRICRNSSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALAL
LFAIHSFCPAPFFVLDEVDAALDNTNIGKVTSFIRDESRENMQIIVISLKEEFFSKADAL
LGVYSDFDECMFSRILTLDLRPYPLVDEDNGSQAHAERTGLV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggatatctgaaacaaatcgatattgaaaacttcaagtcatggcgagggaagaaagtt
gtcggtccgttcatgaggtttaactgtataattggtacaaacggctctggtaagtccaat
gtgatggacgccctgagctttgtcatgggggagcgggctgcctctctccgggtgaagcac
ctccgggacctgatacacggagcccacatcgggcggccggtgcaggacaccgcgcgcgtc
gccatgctgtactgcgacgacgaggaccaggagacggccttctgccggaccatcgtaggt
gactcctctgagtttcacatcaatggggtgcgtgtcactctggccaaatacacagaggag
ctgaagaagatcggcattgtgaccaaagctcgaaactgtctggtgttccagggggcagtg
gagtccatcgctctgaaggacccaaaggagaggaccaagatgtttgagaccatcagtcag
tccaatgagtacgctgcagagtacaataagaagaaagaggccctgctgaaggccaaagag
gacactcagtttcacttcaacaagaagaagtctgctactgtcgagaggaaacaggtgtcc
caggaaagagcagaggcccagaggtaccagggactggtggatgacctttaccaaacccgc
ctgcagctgagcctggctgagctctaccacaatgagaaggccatcgacgctctcagcaac
accctgagggagaaacagcaggctgcagccgctaagaacagtaaagtggtgaacgcagaa
cagacagtcaaaacccacaagaaggaacatggacgcctcaacagagagcagcagcacgtc
gagaaggagatcagcgcccaggagcacatcctgtcccagtctcgatcccagtacatcaaa
gccaaggtgaacacctcacatcacatgaagaaggctgaggaggtccatgacgccctgagg
aagagtcagaggctgatggctgttaaagagcaggagcttgcagagggacggcaggagatc
tctgacctggagagggcctggaggaactacgagaggcgggtacaggaaaggggagcctcc
ccgggcagagacattgagctggatgaagatcagatggagcgatacacagagctgaaggag
ctggcccgaaagcagggggcggtcctcagtcagcaggctgagaaactgcagtgggaggtc
agagcggattacgagaagatggctttcgaccagcgcagaaagaaggaagtggaggttgcc
atcaggaataaccagactcagctggacgatttgacacgcagagcagagaagctggaggac
tacaccaagtcctgcacgttgtcccttgaggattactgtcagcgggagaagagcctgagt
gcagagctgcagcagggccgccaacgcagcgaggaggtgaaccaggagctgggccaggtg
ttggaggagctggggaacgcctgtctggacagtcaggagagcagtcgtcagacgcagcgc
aaagagctgctggagaggctccgcaggctctaccctgaaagtgtgtttggtcgtctgtct
gacttgtgcagcccgatccataagaagttccagctggctgtcaccaaagtgtttggccac
aacatgaacgccattgtcgttacctcagagaaagtagctcgtgactgtatcaatttcatc
aagacggagagagctgagcgtgaaactttcctgcccatcgactacttggatgtgagtcct
ctgaatgagcgactgcgggaggtgccaggtgccaagatggtggtcgatgttgtgcaggtt
aacactggcacagctgctgccctgctaaggaaagtggtgcagtttgtctgtggcaacgcg
ttggtttgtgagaccatcaaagatgcaaggagtttggcctttgatgggcaggtgcgcctc
aagacagtggcgctggatgggaccatgtttacaaagtctggcatgatctctggaggctcc
agttacttgcggaccaaagctcgctgctgggacgagaaggacttgacgaagctgagggaa
cgcaaggaccagctgacagcagagttacgcgatctgatgaagctgaagcggaaggactca
gagctgaaacagatcattgctcaggctcagggcgctcagactcgcctcaaatactccaaa
actgagctggaaaaccttcggaagaaaattatcctgaaatgccaagtggagatttcgcgt
atggagagtgaattagcaaacctggagtctcagatccagatgcagaaggagagtgtggag
gcaaaggatgaacagatgaagaggatcagaggccagatcaatcagatggaagacttggtg
ttttctgacttctgtgctgagatcggtgtggacagcatcagagagtatgagcaggagcac
ctgaaacagcaaacagagcttgacaagaagcggctggagtttgagagtcagtgcactcgc
ctgaaagcgcagctggagtacggacaagaccaactggagcagcagaagaagaagcaccgc
aaaatggaggaaaccatcgacaaggaggagagaaccatggccgagcagaggaaggatgag
gagaagcttctggcagcggtggaggagggccagagcaaactgctggagctgaagaaccag
ctgctgtctaagaagagccaggtgtccgctgccaaagctgagctggaccaaaaaactaag
atcctacaagaaatcaacaaagagttggtgaagcttcaacgggaggtgatgtctgcagaa
acggccctggagcagaaacgcttggtcaaacacaacctgctgttggcctgtaagatccag
agtctgcccgtcattctgctgtcagggagcctggatgaaatcagtgaggtggagctggac
acagaatctgagagcacttcagccaccatgaacatctacgagagagaagcacttctggtc
atcgactactctggcctggacgcagaagtcaggagtctgcaggcagacgaggaaattgag
gcctgcttagagcggctgaaggagtcggcctcctctatagaagcagtgctgcatcgcacc
acagctccaaacctgaaagctctggccaagatgagagaagtgaaggacaagttacacgaa
gtgacagatgcgtttgatgccagcaccagagcagccagaaaatgcagtcaggagttcgag
caggtcaaagcccgtcgcttacaactcttcagccagtgctttgaacacgtgtccatcgtc
atcgatcagatctataagagaatctgcaggaacagcagcgcccaggccattctgagtgca
gagaatccagacgagccatacctcggtggcattaactacaactgtgtggcgccggggaaa
cgcttcatgtccatggacaatctgtctggaggagaaaaggccattgctgccctcgccctg
ttgttcgccatccacagcttctgccctgctcccttcttcgtcctggacgaggtggacgca
gccctggacaatactaacatcggcaaggtgaccagcttcatcagagacgagtccagagag
aacatgcagatcatcgtcatctctctgaaggaggagtttttctctaaggccgacgccttg
ctgggcgtctactcagattttgatgaatgcatgttcagccgtattctgaccctggacctg
cgaccctaccctctggttgacgaagataacgggagccaggcgcacgcagagaggacggga
ctcgtgtag
DBGET
integrated database retrieval system
