Epinephelus fuscoguttatus (brown-marbled grouper): 125887434
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Entry
125887434 CDS
T08419
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125887434
Transcription factors [BR:
efo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125887434
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GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Gp13-like
Motif
Other DBs
NCBI-GeneID:
125887434
NCBI-ProteinID:
XP_049430186
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All DBs
Position
LG4:complement(47000873..47143543)
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AA seq
777 aa
AA seq
DB search
MMSSMRATPPFHPPSEEEEAMGQDNAAWAGDEREGPKETPSPSSHERPHPDELQPIREKL
TEAEWENTAPAVMDNESSKGCSVYSYRTNSTSPPKPEECSRDRGEAMSGLAFGTPERRKG
SLADVVDTLKQKKLVELTKTEQDEPTCMERLLSRDWKERVDRLNANELLGEVKGTPESLE
EKEHQLSTMIGQLISLREQLLSAHDEQKKMAASQLEKQRQQMELARQQQEQIARQQQQLL
QQQHKINILQQQIQVQGHMPPMMIPVFPHDQRSLAAAAAAQQGFLFPPGMSYKPGENYPM
QFIPSTMAAAAASGLSPLQLQQLYAAQLASMQISPGAKMASLPQAPNSSGPLSPSALKSE
KRASSPVAHIKEEGSTQPLNLSARPKTAEPLRSPTSPTQSLFSGNKSSPTGISKGRIPSP
ISNMGRNSSLDILSSLNSTALFGDQDAVMKAIQEARSMREQIQREQLHQQQQQQQPGHHS
LEAKLSALSGMSLNNGNKERLHYETLSQHLGKLGDDAGKMVHRVIDLTRPEDLDGSNITE
ARVFREARGRNNAEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKSMTN
QEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQF
FVGPQPPMPLGSSPGGVGVYPGAITMATTATPSPHLTSDCSSNSASPEPAIPVIQSTYGM
KSEPGGGGSNGGGMGALDLPSDPTNGDDDMDMYEDFEDEPKSDYSSDHEPQEAVSAN
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccatgcgagcaacgcctcccttccacccaccgtctgaggaagaggaagcg
atgggtcaggacaacgcggcctgggccggtgacgagcgagagggcccgaaggagacgcca
tctccctcttctcatgagcggccccaccctgacgagctacagccaatcagagagaagctg
acggaggctgagtgggagaacacggcgcctgctgtgatggacaatgagagcagtaaaggc
tgctccgtctactcctaccggactaactctacctctccacccaagccagaggagtgttcc
agggatcgcggggaggccatgagcggccttgccttcgggacgccggagcgccgtaaagga
agcctggcagacgtggtggacacactgaaacagaagaaactggtggagctgaccaagaca
gaacaagatgagccgacctgcatggagaggctcctctccagggactggaaggagcgcgtt
gatcgtctgaacgctaacgagctgctgggggaggtcaaaggtacgccggagtcactggag
gagaaggagcaccaactctccaccatgatcggtcagctgatcagtcttcgggagcagctc
ctctccgcccacgacgagcagaaaaagatggccgcctcacagctggagaagcagagacaa
cagatggagctggcccggcagcagcaggagcagattgccagacaacagcagcagctcctg
cagcagcagcacaagatcaacattctccaacaacagatccaggtccagggtcacatgcct
ccaatgatgatcccagtgtttcctcacgaccagcggtctctggctgccgctgccgccgca
cagcagggcttcctcttcccaccgggcatgtcctataagccaggtgagaattaccccatg
cagttcattccatccacaatggcagctgcagcggcgtctggactcagcccgttacaacta
cagcagctgtacgccgcccagctggcaagcatgcagatctcaccaggagccaagatggct
tccctcccgcaggctcccaactcctccggtcccctttccccctccgccctgaagagcgag
aagagagcgtccagtcctgttgctcacattaaggaggaaggatccacacagccactgaac
ctctcagccagacccaagacagccgagcctcttcgctccccaacgtccccgacgcagagt
ctgttctccggaaacaagagcagccccacaggcatcagcaagggccgcatccccagcccc
atctccaacatgggcaggaactcctctctggacatcctgtccagcctgaactccacggct
ctgtttggggaccaggacgcggtgatgaaggccatccaggaggcaaggagcatgagggag
cagatccagagggagcagctccaccagcagcagcagcagcagcagccgggacaccacagt
ctggaggccaaactgtcggccctcagcggcatgagcctcaacaacggcaacaaggagcgg
ctgcactacgagactctgagccagcacctggggaagcttggagacgatgctgggaagatg
gtccatcgagtcatcgacctgacgagaccagaagatctggatggaagtaacatcacggag
gcgcgagtgttcagggaggcgcggggcaggaacaacgccgagcctcacatcaagagaccc
atgaatgccttcatggtgtgggccaaagacgagaggaggaagatcctgcagaccttcccc
gacatgcacaactccaacatcagcaagatcctcggctctcgctggaaatccatgaccaac
caggagaagcagccgtactacgaggagcaggcccgcctgagtaaaatccatctggagaaa
tatcccaactacaagtacaagccgcggcccaagagaacctgcatcatcgacggcaaaaag
ctgcgtattggagagtacaagcagatgatgaggtcacggcgtcaggagatgaggcagttc
tttgtcgggcctcagccaccgatgcctcttggcagcagcccgggcggagtgggagtttac
ccgggcgccattaccatggcaacgacagccacaccgtccccacacctgacctcagactgc
tccagcaactcagccagccccgaacccgccatcccggtcattcagagcacgtacgggatg
aagtccgagcccggcggcggaggcagcaatggtggcgggatgggagccttggatctgccc
agcgaccccaccaacggagacgacgacatggacatgtacgaggactttgaggacgagccc
aagtcagactatagcagcgaccacgagccacaggaggccgtcagcgccaactga
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