Epinephelus fuscoguttatus (brown-marbled grouper): 125887477
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Entry
125887477 CDS
T08419
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125887477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125887477
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125887477
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
HECT type E3
125887477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
UvrC_RNaseH
Motif
Other DBs
NCBI-GeneID:
125887477
NCBI-ProteinID:
XP_049430283
LinkDB
All DBs
Position
LG4:11603489..11614682
Genome browser
AA seq
1016 aa
AA seq
DB search
MFSWGEDSQRGFRLKDGSHIDSTTDDGVCHVNLGYHITDLSAGDNVLAFVKSNGNSFIIR
TNESKDGRRVRGKQKFVKFKEKIEAVSCGDDLVTLLSETGKVLCVDTTHTYIPRPVEALC
NIVVSQVACGSQHSVALTKDGQVYTWGQDSRGQLGLGRRKLGASSPPQHLRSLSAIPLVQ
IAAGGEQSFALSVSGGVFGWGRNNCGQLGLGDTKDRNTPTPVHCLNMKKSIHISCGKDHT
AVLTKTGAVFTFGSGQYGQLGHNSFSDELRPRLVAELWGAKVTRIACGRHHTLVLTDSKK
VYSFGCGEQGQLGHGEESHPSVPLPVQLPQGTADDAKIRNIFAGGNCSFATCTSNEDIHE
ESNTDSVNNVTQHCLDNMIEKWTAECDLKSWKKIKQQIHKMFSSVSCVNASFLEQSKDKH
FQTSPKYSGLNLKLARLAFKKLVKKDDVFAEVEAAVLHLLPSLDKKPVSVEGLRIFLLLN
ELLRATQRHKRRQTSTKLAEVVAAAVVNLSADSLQVIGDWWSSLSPSTMVRHVKVWKHAL
SMILSSECVPRNSGVRNLLLVLQYMYNANSRIAEPQKMPDSDFCLSIEKDFLQEDLRLWR
LRSKRKNGHAEPLILCSFPTVMDLESKKFVFDLNADCTKVEALHRKLLDFFLEFGFAQPP
PKDVLLKLDVRRASVLEDTFKQLAAAHHSHYKFPLVVDWGENLTFDDIPLYMKDFFYEVF
HEMVSAESGMFMFNNSKTLAWFPSKPTQEDQRYFQFGVLCGLALYNKCIIHLPFPLALFK
KLLGVKPSLSDMMEFSPSVGESLLNILEDYEDDVIENLYMDFFINWDGTEVALDPENPEK
PVTGQNKKEFVDAYVNHAFNASVEGVFQEFKQGFFQVCDRDLVKLFRPKELQEVLVGKDF
HDWAKLKQNTGYEGEFNTTPPHPTIQMFWEVFDELTEDQRKAFLWFVTGFDKVPVLDMEK
FKMTIKVSPAQDLSYDQQYPETHTCFSALELPLYSSKEIMKTMLTEALSKNRRICE
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggacagtcagcggggctttcggttaaaggatggctcacatatc
gacagtacaacagatgatggggtctgtcatgtaaacctcggttatcacatcacggatctg
tcggcaggtgacaatgtgctggcttttgtcaaaagtaatggaaactccttcatcattcgc
acaaatgagagcaaagatgggagaagagtcagaggaaagcagaagtttgtgaagtttaag
gagaagattgaggctgtgagttgtggtgatgatctggtcacactgctgtctgagacaggg
aaagttctctgtgtggacacaactcacacttacattcctaggcctgtggaagctttgtgt
aacatagtggtatctcaggttgcttgtgggagccagcattcagtcgccctgaccaaagat
ggtcaggtgtatacatggggccaggactccaggggccagctgggtctggggaggaggaag
ctcggcgccagttcaccaccacaacatctccgatctctgtcagcgatacccctggtccag
attgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggctgg
ggcagaaacaactgtggacagctcgggctgggagacacaaaagacagaaatacaccgact
cctgttcattgtctgaacatgaagaaatctattcacatctcctgtggaaaggatcacact
gctgttttgacaaagactggtgcagtgtttacatttggctctggtcagtatggacagctt
gggcacaactcattcagcgatgaactacgacctcggcttgttgcagagctctggggggca
aaggtcaccaggattgcttgtggacgacatcacacattagtgttgacggactcaaagaag
gtctactccttcgggtgtggagagcaggggcagctgggacatggagaggagagtcatcca
tctgtgccgctacctgttcaactgccacagggcaccgctgatgatgctaaaattagaaac
atcttcgcaggaggaaactgttcatttgcaacatgcacatctaatgaggacattcatgag
gagtcaaacactgacagtgtcaacaatgtaacacagcattgtctcgacaacatgattgag
aaatggaccgctgaatgtgacttaaagtcatggaaaaagataaaacagcaaattcacaag
atgttttcctctgtatcctgtgtgaatgcaagctttcttgagcaaagcaaagacaaacat
ttccagacctcaccaaagtactctggcttgaacttgaaacttgcacgacttgctttcaag
aaactggtgaagaaggatgatgtttttgcagaggtcgaggctgctgtcctacacctgctt
ccctctcttgataagaagccagtgagtgtcgagggattgaggatcttcctgcttctcaat
gagctcctacgtgcaacccagagacacaaacggcgtcaaacaagcacaaagcttgctgag
gtggtcgctgctgctgtagtaaacttgtctgctgacagcctgcaggtcataggggactgg
tggtcctcactgtcaccctccaccatggttagacatgttaaggtgtggaagcacgccctg
tcaatgatcctgtcttctgagtgtgttccccgcaactctggagtcagaaacctgctgcta
gtcctccagtacatgtacaatgccaacagcaggattgcagaacctcaaaaaatgccagac
agtgatttctgtttgtctattgagaaagactttcttcaggaggatctacggctttggcgt
ttacggtcaaaacgcaagaatgggcatgctgagccacttatcctctgtagctttccgact
gtgatggatctggagtcaaagaaatttgtttttgacctgaatgctgattgcaccaaggtg
gaggcacttcatcgcaaattgttggatttctttttggaatttggtttcgctcaaccgccg
cctaaagatgtgctcctaaaactggacgtgaggcgagcatcggttttggaggacaccttt
aaacaactggctgctgctcatcacagtcactacaagtttccacttgtggttgattggggt
gaaaacttgacatttgatgatataccactctatatgaaagactttttttatgaagttttt
catgagatggtgtcagctgagtctgggatgttcatgttcaacaactccaaaacgctggca
tggttcccctccaaaccaacacaagaggaccagcgatacttccagtttggagttctgtgt
ggattggctttgtacaacaagtgcatcatacacttacccttcccactggctctgttcaag
aagctgctgggtgttaagccttcactgagcgatatgatggagttcagcccatctgttgga
gagagtctgctgaacatcctggaagactacgaagatgatgtcatagaaaacctctacatg
gatttttttatcaactgggatgggacagaggttgcccttgatcctgaaaatcctgagaag
ccagtgacaggtcaaaataagaaggagtttgtggatgcctacgtgaatcatgccttcaat
gcatcagtggagggtgtgtttcaggagttcaagcaaggcttcttccaggtgtgtgaccgg
gatttggtgaagctcttcagaccaaaggagctgcaggaagtgctggtgggcaaagacttc
catgactgggcaaagctgaaacagaacacaggttatgagggggagttcaataccacacca
ccacaccccaccatacagatgttttgggaggtttttgacgaactaactgaggatcagagg
aaagctttcctttggtttgtgactggttttgacaaggtgcctgttcttgacatggaaaag
ttcaagatgacaatcaaagtcagcccagcccaggacctctcctacgaccagcagtaccct
gaaacacatacatgtttctcagccctggagctgcccttatactcaagcaaagagatcatg
aaaaccatgctgacagaggccctgagcaaaaacagaagaatctgtgagtga
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