Epinephelus fuscoguttatus (brown-marbled grouper): 125887521
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Entry
125887521 CDS
T08419
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04150
mTOR signaling pathway
efo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125887521 (lrp5)
04150 mTOR signaling pathway
125887521 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125887521 (lrp5)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125887521 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125887521
NCBI-ProteinID:
XP_049430352
LinkDB
All DBs
Position
LG4:4251048..4363525
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AA seq
1649 aa
AA seq
DB search
MDLTRRGLEMGGLLVVVLLLWSCLLSAVDGSPLLLFANRRDVRLVDAEGVRGESAIVVSD
LEDAAAVDFLYSEGLIFWTDVSEEAIKQTHWNQSSNSLKEALGTGQTVVVSGLDSPDGLA
CDWLGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPAQRYMYWTDWGEEP
RIERAGMDGSNRKVIVVVDIYWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSARETVVE
GTLTHPFALTLSEETLYWTDWQTRSIHACNKHSGDKTREILSGIYSPMDIQVLEAYRQPY
IHTPCSDNNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRR
ISLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAMMLVTTE
INHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPINGYMY
WTDWGEHPKIERANLDGTERVVLLNSSLGWPNGLAIDYAAGKLYWGDAKTDKIEVINVDG
SNRQTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKAT
KVTETYGTNGCAVDNGGCSHLCFWCRQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDN
IRSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIE
FGLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLAL
DPANGYMYWTEWGGRPRIARAYMDGSTITTLVDKVGRANGLTIDYVDHRLYWTDLDTCMI
ESTNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLE
LMLDILVFHSSRQEGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNCSSPSSF
LLFSQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGA
MSSMIVSSSVQPVDNQLHDLSLDPYSRHIYWTCETTNTINVQRMDGHTVGVVLKDDTDKP
RAIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWV
DADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHVYWIDRQQQMIERVDKLTGDGRT
RIQGRISYLTSIHAVEEMDPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQD
LLHCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFPECDDSSDEENCPVCSAFQFQCDKGG
CIDAQRRCNGEPDCADHSDEQDCETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELA
CEYVSPPSSGIPNTGPNTIVPVICIILLVFVIGGAYFVCQRVVCRRYKGPSGTFPHEYIS
GTPHVPLNFIAPSSSQHGTFQGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSS
STKGAFYPQILNPPPSPATDRSLYNTEIFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTD
VCDSDYTPHHPPAGLASSAGRWKASGHGSHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSA
EESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggatttaacgcggagaggacttgaaatgggcggtctgctggtggtggtgttgctgctg
tggagttgcttgctgtcggcggttgacggctcacctctcctcctgtttgccaaccggcgt
gatgttcgattggtagatgcagagggtgtgcggggtgagtcggctatcgttgttagtgac
ctagaggatgcagcagctgtggacttcctgtattctgagggcctgatattttggacagat
gtcagcgaggaggccatcaaacagacgcactggaatcagtcctccaactcccttaaagag
gcgttgggaactggccagactgtggtagtatcagggctggacagtcctgacgggttggcc
tgtgactggttgggtagaaagctctactggacagactcagagaccaatcggattgaagtg
gccaatctggatggcacctccaggaaggtcctgttttggatggacttggaccagcccagg
gcgatcgctctcaaccctgctcaacgctacatgtactggacagactggggagaggagccc
aggatagagcgtgctggtatggatggtagcaacaggaaagttatagtggtcgtggacata
tactggcccaacggtcttaccatagacctggtggaacagaagctgtactgggcagatgcc
aaactcagcttcattcacagagctaacctggatggatcagcacgtgaaaccgtggtggag
ggcaccctgacccacccttttgcactcactctgtctgaggagaccttatactggaccgac
tggcagacccgctccatccatgcctgtaacaagcacagcggagacaaaaccagggagatc
ctaagtgggatttactcccctatggacatccaagtcctggaggcctatcgacagccttac
atccacactccctgtagtgacaataatggaggctgtagtcacctctgcttactctcacca
gtccagcctttctacagctgtgcctgccccactggagtccagcttaaaccagatggaaag
acatgcaaaccaggagcagagcaggttttgctgctggctcgacggactgacctgaggaga
atctcactggacctgccagacttcactgacatagtactacaggttgatgacattcgccat
gccatagctatcgactatgacccagttgagggttacgtttattggacagatgatgaggtt
cgggccatcaggcgatcccacatcgatggcagcaatgccatgatgttggttaccacggag
atcaaccacccagatggcattgctgtggactgggtggccagaaacctgtactggactgac
actggcactgaccgcattgaggttaccaggcttaatggaacctctcggaaaattctcatt
tcggagaacctggatgaacccagagctattgtcctggaccccattaatggctacatgtac
tggactgactggggcgagcatcctaagatcgagcgggccaacctggatgggacagagcgg
gtggttctgctcaacagctctctgggctggcccaatggactggctatcgattatgcagca
ggaaagctatactggggagatgctaaaactgacaagatagaggtgatcaacgtggatggc
agtaacagacagactctgctggaggacaagctgcctcatatctttggttttactctgctt
ggtgattacatctattggactgactggcaaagacgcagcattgagagggtccacaaagct
acggctgtacgagagatcatcatcgatcagctgccggatttaatggggctgaaggccact
aaagtgacagagacatatggtacaaacggctgtgcggtggataatggcggatgcagccat
ctgtgtttctggtgtcgacaggctgtcagctgtgcctgtcccatggggatggagcttctc
tcagacctgcagacttgtgtggtgcctgaggccttcctgctcttcaccaacagggacaac
atccggagtatctctttgggtaccaacagcaatgatgtggccatccctctgacaggagtt
aaagaggcctctgctctcgactttgatgtctctgaaagaagaatatactggacagacata
caagccaagacaatcagcagagcatatatgaatggcagctctgtagaacatgtcattgag
ttcggactggactacccagagggcatggcagttgactggatgggtcgaaacatctactgg
gctgatacaggcacgaaccgcatcgaggtggcccggctggacggccagtaccggcaggtt
ctggtctgtaaggatcttgacaacccacgctcactggacaacccacgatcattagcactg
gacccagccaacggctacatgtactggacagagtggggtggtcgacctcgtatagccaga
gcctacatggatggcagcaccatcacaacgctggtggataaagtgggccgggccaacgga
ctgaccattgactatgtagaccatcgactatactggaccgacttggacacatgtatgatc
gaaagcaccaacatgcaaggccttcagagggagatcatcgtagacgacctccctcacccc
ttcggtctgactcagtaccgagattttatctactggacagattttaacctgcgcagtatt
gaacgagcagacaaacgcagcggactcaaccgcactgtggtgctgcagggccagcttgag
ctgatgctggacattctggtgttccactcctcccgtcaggagggtaccaacgagtgctcc
cataacaacggcaactgtgctcatctttgccttgccacgcctgctggtgcccagtgccgc
tgtgcctcccactacactttaaaccccgatggacgaaactgtagctctccctctagtttc
ctgctcttcagtcagaaggccagtatcagcaggatggtcttgggagagcagagtcctgac
atcatcctgcccatccacgtcctgaggaacgtccgagctgtaagctacgacccgctggac
cggctggtctactggctggatggacgacagaacatccgcagggccagagatgatggagcc
atgtcttccatgatagtgagcagcagcgttcagccagtagataaccagcttcatgacctg
agcctggacccctacagtcgccatatttactggacctgtgagacaaccaacaccatcaat
gtccagaggatggatggacacaccgtgggtgtggtcctgaaggatgacactgacaagcca
cgggccattgtggttaatgccgagaaagggtacatgtatttcaccacagtgcaagaacgc
tcagctaagattgaaggagccagtctagatgggacagagagagagtctctgttcaccact
gggctgatcagaccagtcgctctggctctggataacaaactaggaaaactattctgggta
gacgccgaccttaaacgcatcgagagtagtgacctgacaggagccaatcgcatcgtcctc
caggattccaacattctccagccaatggggctgacagtcctaggagatcatgtgtactgg
atcgaccggcaacagcagatgatagagagggtggacaaactgactggagatggacgcaca
cgcatacagggacggatatcatatctgacttccatccatgctgtggaagagatggatccg
caagagttcgcatcccacccttgttcccgtgacaacgggggctgttctcacatctgcatt
gctaagggtgacggaacacctcgctgctcctgtcccatgcacctggtgttattgcaggac
ctgctgcactgtggggagcctcccacctgctccacagagcagttcacgtgctccacagga
gagatcgactgtattcctatggcttggcgttgtgatggtttccctgaatgtgatgacagc
agtgatgaagagaactgccccgtctgctcagcctttcagttccagtgtgataaaggaggt
tgcatcgatgctcaaaggcgctgcaatggtgaaccggactgcgcagatcactctgatgaa
caggattgtgaaaccatctgccctcccaaccagttccgctgtggtgacaaccagtgcatc
acaaagaaacaacagtgtgataactactcagactgccctgacggatcagatgagcttgcc
tgtgagtatgtgtctcccccctccagtggcatccctaacactgggcctaacaccatcgtt
ccagtcatttgcatcatcctgctcgtctttgtgatcggaggagcttatttcgtgtgtcag
cgtgtggtgtgtcgacgctacaaaggccccagtggaacttttccccacgagtacatcagt
ggtacaccccatgtgcccctcaatttcatcgcccccagcagctctcagcatggcaccttc
caaggtatttcctgtgggaagtctatgatgagttcagtgagtctgatgggcagcagcagc
agtggagcccctctctatgacaggaaccacgtgactggagcctcatccagcagctcatca
tccaccaagggagccttctatcctcagatcctgaaccctcctccgtccccagctactgac
cgctctctctacaacacagagatcttctactcctccaacagtccgtccaccaccagatca
tacagaccctatcacccagtccgtggtgcagctccacctactactccatgcagcactgac
gtctgcgacagcgactacacccctcatcacccaccggctgggctggcgtcatcagcaggc
cgctggaaggcctcgggccacggcagccacggcaaacacaacaagtactacatggacctt
aactcagactcggacccctaccctccacctccgaccccccgctcccagtacctgtcagct
gaggagagctgcccgccctccccttccaccgagcgctcttacttccacttgtgcccgcct
cctccctcgccctgcaccgactcctcgtga
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integrated database retrieval system
